RNA–Protein interactions for RNA: ENST00000595690.1

SPTBN4-208, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 763 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-208ENST00000595690 RCAN3Q9UKA8 241 aa12.68□□□□□ -0.38
SPTBN4-208ENST00000595690 PLAGL2Q9UPG8 496 aa12.68□□□□□ -0.38
SPTBN4-208ENST00000595690 TELO2Q9Y4R8 837 aa12.68□□□□□ -0.38
SPTBN4-208ENST00000595690 SUPT16HQ9Y5B9 1047 aaKnown RBP12.68□□□□□ -0.38
SPTBN4-208ENST00000595690 MYH6P13533 1939 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 GFRA3O60609 400 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 GLP2RO95838 553 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 RRP1P56182 461 aaKnown RBP12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 MGAT3Q09327 533 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 SEMA3FQ13275 785 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 MCMDC2Q4G0Z9 681 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 ASPRV1Q53RT3 343 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 TRIM50Q86XT4 487 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 EFHBQ8N7U6 833 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 LMBR1Q8WVP7 490 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 MTMR8Q96EF0 704 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 RWDD3Q9Y3V2 267 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 PCDHB15Q9Y5E8 787 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 DMXL1Q9Y485 3027 aa12.67□□□□□ -0.38
SPTBN4-208ENST00000595690 PLXNA3P51805 1871 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 ZNF292O60281 2723 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 ENPP3O14638 875 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 DGKIO75912 1065 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 CSPG5O95196 566 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 HOXA13P31271 388 aaPredicted RBP12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 LPIN1Q14693 890 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 SLC35G1Q2M3R5 365 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 SUGP1Q8IWZ8 645 aaKnown RBP12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 ENAHQ8N8S7 591 aaPredicted RBP12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 SPPL3Q8TCT6 385 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 LINC01599Q8WXQ3 324 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 ESR2Q92731 530 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 P2RX5Q93086 422 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 GPR20Q99678 358 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 PLVAPQ9BX97 442 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 AMNQ9BXJ7 453 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 VAT1LQ9HCJ6 419 aa12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 MAP3K20Q9NYL2 800 aaKnown RBP12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 MRPL42Q9Y6G3 142 aaKnown RBP12.66□□□□□ -0.38
SPTBN4-208ENST00000595690 CCDC171Q6TFL3 1326 aa12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 ITGB1P05556 798 aa12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 GHRP10912 638 aa12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 ICAM3P32942 547 aa12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 NDUFV1P49821 464 aa12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 MRPS9P82933 396 aaKnown RBP12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 SIGLEC14Q08ET2 396 aa12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 NMIQ13287 307 aaPredicted RBP12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 BTG3Q14201 252 aaPredicted RBP12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 METTL7BQ6UX53 244 aa12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 RUFY4Q6ZNE9 571 aa12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 STAG2Q8N3U4 1231 aa12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 USP26Q9BXU7 913 aa12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 KAT14Q9H8E8 782 aa12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 MLXIPQ9HAP2 919 aa12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 USP15Q9Y4E8 981 aaPredicted RBP12.65□□□□□ -0.38
SPTBN4-208ENST00000595690 KIAA1671Q9BY89 1806 aa12.65□□□□□ -0.39
SPTBN4-208ENST00000595690 FRMPD4Q14CM0 1322 aa12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 FRYLO94915 3013 aa12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 KDM4AO75164 1064 aa12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 PARP1P09874 1014 aaKnown RBP12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 GNAT1P11488 350 aa12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 CCND2P30279 289 aa12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 ARHGAP4P98171 946 aa12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 RTN4RL1Q86UN2 441 aaPredicted RBP12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 TICAM2Q86XR7 235 aa12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 SUSD6Q92537 303 aa12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 INPP4AQ96PE3 977 aaPredicted RBP12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 ZSCAN10Q96SZ4 725 aaPredicted RBP12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 RNF41Q9H4P4 317 aaPredicted RBP12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 PCDHGC5Q9Y5F6 944 aa12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 LAMA4Q16363 1823 aa12.64□□□□□ -0.39
SPTBN4-208ENST00000595690 SPATA31C2B4DYI2 1134 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 PROB1E7EW31 1015 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 DHX16O60231 1041 aaKnown RBP12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 AVPR2P30518 371 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 NRIP1P48552 1158 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 NT5C2P49902 561 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 PDE1AP54750 535 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 FOXK2Q01167 660 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 NAALADL2Q58DX5 795 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 FBXO47Q5MNV8 452 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 CYFIP1Q7L576 1253 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 SAMD3Q8N6K7 520 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 KLHL23Q8NBE8 558 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 VN1R2Q8NFZ6 395 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 PHF7Q9BWX1 381 aaPredicted RBP12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 AGO3Q9H9G7 860 aaKnown RBP12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 ZSWIM5Q9P217 1185 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 PCDHA1Q9Y5I3 950 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 DOCK5Q9H7D0 1870 aa12.63□□□□□ -0.39
SPTBN4-208ENST00000595690 NRCAMQ92823 1304 aa12.62□□□□□ -0.39
SPTBN4-208ENST00000595690 B4E1Z4 1266 aa12.62□□□□□ -0.39
SPTBN4-208ENST00000595690 NOP56O00567 594 aaKnown RBP12.62□□□□□ -0.39
SPTBN4-208ENST00000595690 ZBTB5O15062 677 aa12.62□□□□□ -0.39
SPTBN4-208ENST00000595690 PDGFBP01127 241 aaPredicted RBP12.62□□□□□ -0.39
SPTBN4-208ENST00000595690 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
SPTBN4-208ENST00000595690 CCDC178Q5BJE1 867 aa12.62□□□□□ -0.39
SPTBN4-208ENST00000595690 MARCH8Q5T0T0 291 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms