RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 RNF146Q9NTX7 359 aa11.32□□□□□ -0.6
TUBD1-215ENST00000593110 TFIP11Q9UBB9 837 aaKnown RBP11.32□□□□□ -0.6
TUBD1-215ENST00000593110 FEM1BQ9UK73 627 aa11.32□□□□□ -0.6
TUBD1-215ENST00000593110 EXOC6BQ9Y2D4 811 aa11.32□□□□□ -0.6
TUBD1-215ENST00000593110 DMDP11532 3685 aa11.32□□□□□ -0.6
TUBD1-215ENST00000593110 COL4A6Q14031 1691 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 PALM3A6NDB9 673 aaPredicted RBP11.31□□□□□ -0.6
TUBD1-215ENST00000593110 KIF28PB7ZC32 967 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 IPO8O15397 1037 aaKnown RBP11.31□□□□□ -0.6
TUBD1-215ENST00000593110 GJB5O95377 273 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 MUM1L1Q5H9M0 696 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 CEP85Q6P2H3 762 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 NFRKBQ6P4R8 1299 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 TRIM50Q86XT4 487 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 GMCL1P1Q8NEA9 526 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 PRSS33Q8NF86 280 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 EXOC6Q8TAG9 804 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 MKL1Q969V6 931 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 CRBNQ96SW2 442 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 DNAJC2Q99543 621 aaKnown RBP11.31□□□□□ -0.6
TUBD1-215ENST00000593110 ALG13Q9NP73 1137 aaKnown RBP11.31□□□□□ -0.6
TUBD1-215ENST00000593110 CYP39A1Q9NYL5 469 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 ARPP21Q9UBL0 812 aaPredicted RBP11.31□□□□□ -0.6
TUBD1-215ENST00000593110 SYNPO2Q9UMS6 1093 aa11.31□□□□□ -0.6
TUBD1-215ENST00000593110 KMT2EQ8IZD2 1858 aa11.3□□□□□ -0.6
TUBD1-215ENST00000593110 RBM47A0AV96 593 aaKnown RBP11.3□□□□□ -0.6
TUBD1-215ENST00000593110 IL2RAP01589 272 aa11.3□□□□□ -0.6
TUBD1-215ENST00000593110 CXCL10P02778 98 aa11.3□□□□□ -0.6
TUBD1-215ENST00000593110 RBL2Q08999 1139 aa11.3□□□□□ -0.6
TUBD1-215ENST00000593110 SBK1Q52WX2 424 aa11.3□□□□□ -0.6
TUBD1-215ENST00000593110 LYSMD3Q7Z3D4 306 aa11.3□□□□□ -0.6
TUBD1-215ENST00000593110 RPAP2Q8IXW5 612 aaPredicted RBP11.3□□□□□ -0.6
TUBD1-215ENST00000593110 DHX38Q92620 1227 aaKnown RBP11.3□□□□□ -0.6
TUBD1-215ENST00000593110 ZNF775Q96BV0 537 aaPredicted RBP11.3□□□□□ -0.6
TUBD1-215ENST00000593110 CEP95Q96GE4 821 aa11.3□□□□□ -0.6
TUBD1-215ENST00000593110 TGS1Q96RS0 853 aaKnown RBP11.3□□□□□ -0.6
TUBD1-215ENST00000593110 ESYT1Q9BSJ8 1104 aa11.3□□□□□ -0.6
TUBD1-215ENST00000593110 MTG1Q9BT17 334 aaPredicted RBP11.3□□□□□ -0.6
TUBD1-215ENST00000593110 IL1RAPL2Q9NP60 686 aa11.3□□□□□ -0.6
TUBD1-215ENST00000593110 CLIP2Q9UDT6 1046 aa11.3□□□□□ -0.6
TUBD1-215ENST00000593110 MTUS1Q9ULD2 1270 aa11.3□□□□□ -0.6
TUBD1-215ENST00000593110 MAFBQ9Y5Q3 323 aaPredicted RBP11.3□□□□□ -0.6
TUBD1-215ENST00000593110 SLC4A4Q9Y6R1 1079 aa11.3□□□□□ -0.6
TUBD1-215ENST00000593110 MYO7AQ13402 2215 aa11.29□□□□□ -0.6
TUBD1-215ENST00000593110 ZFHX2Q9C0A1 2572 aaPredicted RBP11.29□□□□□ -0.6
TUBD1-215ENST00000593110 H3BQ06 376 aaPredicted RBP11.29□□□□□ -0.6
TUBD1-215ENST00000593110 RLBP1P12271 317 aa11.29□□□□□ -0.6
TUBD1-215ENST00000593110 GDF10P55107 478 aa11.29□□□□□ -0.6
TUBD1-215ENST00000593110 PTPN11Q06124 597 aaPredicted RBP11.29□□□□□ -0.6
TUBD1-215ENST00000593110 LRRFIP1Q32MZ4 808 aaKnown RBP11.29□□□□□ -0.6
TUBD1-215ENST00000593110 TKFCQ3LXA3 575 aa11.29□□□□□ -0.6
TUBD1-215ENST00000593110 KIAA1211Q6ZU35 1233 aa11.29□□□□□ -0.6
TUBD1-215ENST00000593110 ERC1Q8IUD2 1116 aa11.29□□□□□ -0.6
TUBD1-215ENST00000593110 AMOTL1Q8IY63 956 aa11.29□□□□□ -0.6
TUBD1-215ENST00000593110 LRRC47Q8N1G4 583 aaKnown RBP11.29□□□□□ -0.6
TUBD1-215ENST00000593110 RHPN1Q8TCX5 695 aa11.29□□□□□ -0.6
TUBD1-215ENST00000593110 FRAT1Q92837 279 aaPredicted RBP11.29□□□□□ -0.6
TUBD1-215ENST00000593110 RAD9AQ99638 391 aa11.29□□□□□ -0.6
TUBD1-215ENST00000593110 FTOQ9C0B1 505 aaKnown RBP eCLIP11.29□□□□□ -0.6
TUBD1-215ENST00000593110 PUS7LQ9H0K6 701 aaKnown RBP11.29□□□□□ -0.6
TUBD1-215ENST00000593110 ETNK1Q9HBU6 452 aa11.29□□□□□ -0.6
TUBD1-215ENST00000593110 MTMR4Q9NYA4 1195 aa11.29□□□□□ -0.6
TUBD1-215ENST00000593110 MICAL3Q7RTP6 2002 aa11.29□□□□□ -0.6
TUBD1-215ENST00000593110 NBNO60934 754 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 MYL3P08590 195 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 BMP3P12645 472 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 IRS1P35568 1242 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 KCNJ6P48051 423 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 CPT1AP50416 773 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 ATP1A2P50993 1020 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 BFSP2Q13515 415 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 UBE3CQ15386 1083 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 CNKSR3Q6P9H4 555 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 RASGRP2Q7LDG7 609 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 ADHFE1Q8IWW8 467 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 MRPL38Q96DV4 380 aaKnown RBP11.28□□□□□ -0.6
TUBD1-215ENST00000593110 TRERF1Q96PN7 1200 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 C17orf80Q9BSJ5 609 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 EPB41L4AQ9HCS5 686 aaPredicted RBP11.28□□□□□ -0.6
TUBD1-215ENST00000593110 PAG1Q9NWQ8 432 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 NXF1Q9UBU9 619 aaKnown RBP11.28□□□□□ -0.6
TUBD1-215ENST00000593110 PRKAG3Q9UGI9 489 aa11.28□□□□□ -0.6
TUBD1-215ENST00000593110 CTDP1Q9Y5B0 961 aaPredicted RBP11.28□□□□□ -0.6
TUBD1-215ENST00000593110 GSG1L2A8MUP6 293 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 TMEM232C9JQI7 657 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 STAU1O95793 577 aaKnown RBP11.27□□□□□ -0.61
TUBD1-215ENST00000593110 ALAS1P13196 640 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 ALDH5A1P51649 535 aaPredicted RBP11.27□□□□□ -0.61
TUBD1-215ENST00000593110 STAT2P52630 851 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 AAMPQ13685 434 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 HERC4Q5GLZ8 1057 aaPredicted RBP11.27□□□□□ -0.61
TUBD1-215ENST00000593110 FAM47CQ5HY64 1035 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 PRICKLE2Q7Z3G6 844 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 SESTD1Q86VW0 696 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 RETREG2Q8NC44 543 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 OR6J1Q8NGC5 347 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 CAGE1Q8TC20 777 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 AFAP1L1Q8TED9 768 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 WDR11Q9BZH6 1224 aa11.27□□□□□ -0.61
TUBD1-215ENST00000593110 PCDHGA11Q9Y5H2 935 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms