RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 BICD2Q8TD16 824 aa26.45■■□□□ 1.82
LSM7-206ENST00000591515 TBC1D5Q92609 795 aa26.45■■□□□ 1.82
LSM7-206ENST00000591515 COPS5Q92905 334 aa26.45■■□□□ 1.82
LSM7-206ENST00000591515 LLPHQ9BRT6 129 aaKnown RBP26.45■■□□□ 1.82
LSM7-206ENST00000591515 SMCO2A6NFE2 343 aa26.44■■□□□ 1.82
LSM7-206ENST00000591515 A6NJR5 290 aa26.44■■□□□ 1.82
LSM7-206ENST00000591515 LARGE1O95461 756 aa26.44■■□□□ 1.82
LSM7-206ENST00000591515 PKN1Q16512 942 aa26.44■■□□□ 1.82
LSM7-206ENST00000591515 BRDTQ58F21 947 aaPredicted RBP26.44■■□□□ 1.82
LSM7-206ENST00000591515 GJD3Q8N144 294 aa26.44■■□□□ 1.82
LSM7-206ENST00000591515 CTAGE1Q96RT6 745 aa26.44■■□□□ 1.82
LSM7-206ENST00000591515 SUGCTQ9HAC7 445 aa26.44■■□□□ 1.82
LSM7-206ENST00000591515 RIC8AQ9NPQ8 531 aa26.44■■□□□ 1.82
LSM7-206ENST00000591515 MTUS1Q9ULD2 1270 aa26.44■■□□□ 1.82
LSM7-206ENST00000591515 NOD1Q9Y239 953 aa26.44■■□□□ 1.82
LSM7-206ENST00000591515 ZNF318Q5VUA4 2279 aa26.43■■□□□ 1.82
LSM7-206ENST00000591515 SPDYE3A6NKU9 549 aa26.43■■□□□ 1.82
LSM7-206ENST00000591515 HOXA13P31271 388 aaPredicted RBP26.43■■□□□ 1.82
LSM7-206ENST00000591515 FCHSD1Q86WN1 690 aa26.43■■□□□ 1.82
LSM7-206ENST00000591515 TAAR1Q96RJ0 339 aa26.43■■□□□ 1.82
LSM7-206ENST00000591515 ORC3Q9UBD5 711 aaPredicted RBP26.43■■□□□ 1.82
LSM7-206ENST00000591515 KIAA1217Q5T5P2 1943 aa26.43■■□□□ 1.82
LSM7-206ENST00000591515 MICAL3Q7RTP6 2002 aa26.43■■□□□ 1.82
LSM7-206ENST00000591515 NKRFO15226 690 aaKnown RBP eCLIP26.42■■□□□ 1.82
LSM7-206ENST00000591515 KPNA6O60684 536 aa26.42■■□□□ 1.82
LSM7-206ENST00000591515 FOSP01100 380 aaPredicted RBP26.42■■□□□ 1.82
LSM7-206ENST00000591515 HMGN5P82970 282 aaKnown RBP26.42■■□□□ 1.82
LSM7-206ENST00000591515 TCTN1Q2MV58 587 aa26.42■■□□□ 1.82
LSM7-206ENST00000591515 LEXMQ3ZCV2 418 aa26.42■■□□□ 1.82
LSM7-206ENST00000591515 CCDC83Q8IWF9 413 aa26.42■■□□□ 1.82
LSM7-206ENST00000591515 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.42■■□□□ 1.82
LSM7-206ENST00000591515 AFAP1L1Q8TED9 768 aa26.42■■□□□ 1.82
LSM7-206ENST00000591515 ZBED2Q9BTP6 218 aa26.42■■□□□ 1.82
LSM7-206ENST00000591515 RBAK-RBAKDNI3L0D1 243 aa26.41■■□□□ 1.82
LSM7-206ENST00000591515 IL9P15248 144 aa26.41■■□□□ 1.82
LSM7-206ENST00000591515 ERVK-21P61565 698 aa26.41■■□□□ 1.82
LSM7-206ENST00000591515 PTGISQ16647 500 aa26.41■■□□□ 1.82
LSM7-206ENST00000591515 CAGE1Q8TC20 777 aa26.41■■□□□ 1.82
LSM7-206ENST00000591515 ZMYND12Q9H0C1 365 aa26.41■■□□□ 1.82
LSM7-206ENST00000591515 PXMP2Q9NR77 195 aa26.41■■□□□ 1.82
LSM7-206ENST00000591515 KIF3AQ9Y496 699 aa26.41■■□□□ 1.82
LSM7-206ENST00000591515 LINC01553A4QN01 128 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 PPFIA3O75145 1194 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 GJB5O95377 273 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 KCNA5P22460 613 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 MRE11P49959 708 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 NLRP5P59047 1200 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 AP3B2Q13367 1082 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 STXBP2Q15833 593 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 GALNT17Q6IS24 598 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 CNKSR3Q6P9H4 555 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 USP17L6PQ6QN14 398 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 CCDC155Q8N6L0 562 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 NSUN7Q8NE18 718 aaKnown RBP26.4■■□□□ 1.82
LSM7-206ENST00000591515 SCFD2Q8WU76 684 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 DHX38Q92620 1227 aaKnown RBP26.4■■□□□ 1.82
LSM7-206ENST00000591515 TGS1Q96RS0 853 aaKnown RBP26.4■■□□□ 1.82
LSM7-206ENST00000591515 COL20A1Q9P218 1284 aa26.4■■□□□ 1.82
LSM7-206ENST00000591515 WDFY4Q6ZS81 3184 aa26.39■■□□□ 1.82
LSM7-206ENST00000591515 MEIS2O14770 477 aa26.39■■□□□ 1.82
LSM7-206ENST00000591515 EIF2AK2P19525 551 aaKnown RBP26.39■■□□□ 1.82
LSM7-206ENST00000591515 EDNRBP24530 442 aa26.39■■□□□ 1.82
LSM7-206ENST00000591515 CHMP4BP1P59074 171 aa26.39■■□□□ 1.82
LSM7-206ENST00000591515 TRIM29Q14134 588 aa26.39■■□□□ 1.82
LSM7-206ENST00000591515 GDF6Q6KF10 455 aaPredicted RBP26.39■■□□□ 1.82
LSM7-206ENST00000591515 XRRA1Q6P2D8 792 aa26.39■■□□□ 1.82
LSM7-206ENST00000591515 LRRC8DQ7L1W4 858 aa26.39■■□□□ 1.82
LSM7-206ENST00000591515 NLRC5Q86WI3 1866 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 MYH7BA7E2Y1 1941 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 ATG2AQ2TAZ0 1938 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 STAM2O75886 525 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 ARIH2O95376 493 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 CTDNEP1O95476 244 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 CXCL10P02778 98 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 NR3C2P08235 984 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 SELPP16109 830 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 CCND2P30279 289 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 SSTR3P32745 418 aaPredicted RBP26.38■■□□□ 1.81
LSM7-206ENST00000591515 TYW1BQ6NUM6 668 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 TMX3Q96JJ7 454 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 UIMC1Q96RL1 719 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 RAD9AQ99638 391 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 PDCD2LQ9BRP1 358 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 VPS54Q9P1Q0 977 aa26.38■■□□□ 1.81
LSM7-206ENST00000591515 NBNO60934 754 aa26.37■■□□□ 1.81
LSM7-206ENST00000591515 EIF3JO75822 258 aaKnown RBP26.37■■□□□ 1.81
LSM7-206ENST00000591515 TXNP10599 105 aaKnown RBP26.37■■□□□ 1.81
LSM7-206ENST00000591515 PTCRAQ6ISU1 281 aaPredicted RBP26.37■■□□□ 1.81
LSM7-206ENST00000591515 REXO1Q8N1G1 1221 aaKnown RBP26.37■■□□□ 1.81
LSM7-206ENST00000591515 FAM184AQ8NB25 1140 aa26.37■■□□□ 1.81
LSM7-206ENST00000591515 ALG1Q9BT22 464 aa26.37■■□□□ 1.81
LSM7-206ENST00000591515 MYO7AQ13402 2215 aa26.37■■□□□ 1.81
LSM7-206ENST00000591515 RBL2Q08999 1139 aa26.36■■□□□ 1.81
LSM7-206ENST00000591515 PGM5Q15124 567 aa26.36■■□□□ 1.81
LSM7-206ENST00000591515 UBE2SQ16763 222 aa26.36■■□□□ 1.81
LSM7-206ENST00000591515 SESTD1Q86VW0 696 aa26.36■■□□□ 1.81
LSM7-206ENST00000591515 BRMS1Q9HCU9 246 aa26.36■■□□□ 1.81
LSM7-206ENST00000591515 PCDHA6Q9UN73 950 aa26.36■■□□□ 1.81
LSM7-206ENST00000591515 PCDHA8Q9Y5H6 950 aa26.36■■□□□ 1.81
LSM7-206ENST00000591515 FRMPD4Q14CM0 1322 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms