RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 SIRPGQ9P1W8 387 aa6.51□□□□□ -1.37
VMP1-205ENST00000587470 WASF3Q9UPY6 502 aa6.51□□□□□ -1.37
VMP1-205ENST00000587470 LMTK3Q96Q04 1460 aa6.51□□□□□ -1.37
VMP1-205ENST00000587470 CHD1O14646 1710 aa6.5□□□□□ -1.37
VMP1-205ENST00000587470 FAM47E-STBD1D6RA91 191 aa6.5□□□□□ -1.37
VMP1-205ENST00000587470 ADCY3O60266 1144 aa6.5□□□□□ -1.37
VMP1-205ENST00000587470 MLLT6P55198 1093 aaPredicted RBP6.5□□□□□ -1.37
VMP1-205ENST00000587470 GRIN1Q05586 938 aa6.5□□□□□ -1.37
VMP1-205ENST00000587470 SSRP1Q08945 709 aaKnown RBP6.5□□□□□ -1.37
VMP1-205ENST00000587470 TUSC3Q13454 348 aa6.5□□□□□ -1.37
VMP1-205ENST00000587470 TMC5Q6UXY8 1006 aa6.5□□□□□ -1.37
VMP1-205ENST00000587470 RBM12BQ8IXT5 1001 aaKnown RBP6.5□□□□□ -1.37
VMP1-205ENST00000587470 ZBTB38Q8NAP3 1195 aaPredicted RBP6.5□□□□□ -1.37
VMP1-205ENST00000587470 RBM15Q96T37 977 aaKnown RBP eCLIP6.5□□□□□ -1.379e-6■□□□□ 8.2
VMP1-205ENST00000587470 CDC6Q99741 560 aa6.5□□□□□ -1.37
VMP1-205ENST00000587470 HIRIP3Q9BW71 556 aaPredicted RBP6.5□□□□□ -1.37
VMP1-205ENST00000587470 TMEM168Q9H0V1 697 aa6.5□□□□□ -1.37
VMP1-205ENST00000587470 CROTQ9UKG9 612 aa6.5□□□□□ -1.37
VMP1-205ENST00000587470 DSEQ9UL01 958 aa6.5□□□□□ -1.37
VMP1-205ENST00000587470 INVSQ9Y283 1065 aa6.5□□□□□ -1.37
VMP1-205ENST00000587470 ASXL2Q76L83 1435 aa6.5□□□□□ -1.37
VMP1-205ENST00000587470 CCDC85CA6NKD9 419 aa6.49□□□□□ -1.37
VMP1-205ENST00000587470 NKRFO15226 690 aaKnown RBP eCLIP6.49□□□□□ -1.37
VMP1-205ENST00000587470 PLATP00750 562 aa6.49□□□□□ -1.37
VMP1-205ENST00000587470 TBC1D10BQ4KMP7 808 aaPredicted RBP6.49□□□□□ -1.37
VMP1-205ENST00000587470 PAN2Q504Q3 1202 aaKnown RBP6.49□□□□□ -1.37
VMP1-205ENST00000587470 VASNQ6EMK4 673 aa6.49□□□□□ -1.37
VMP1-205ENST00000587470 PTPRN2Q92932 1015 aa6.49□□□□□ -1.37
VMP1-205ENST00000587470 ARMC5Q96C12 935 aa6.49□□□□□ -1.37
VMP1-205ENST00000587470 YTHDC1Q96MU7 727 aaKnown RBP6.49□□□□□ -1.37
VMP1-205ENST00000587470 IPPKQ9H8X2 491 aa6.49□□□□□ -1.37
VMP1-205ENST00000587470 ERCC6L2Q5T890 1561 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 CCDC88BA6NC98 1476 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 TRBV23-1A0A0A0MS06 115 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 AQP7O14520 342 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 FAHP16930 419 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 GTF2F1P35269 517 aaKnown RBP eCLIP6.48□□□□□ -1.37
VMP1-205ENST00000587470 EPHA5P54756 1037 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 SURF1Q15526 300 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 HHIPL2Q6UWX4 724 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 MAMDC2Q7Z304 686 aaPredicted RBP6.48□□□□□ -1.37
VMP1-205ENST00000587470 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.48□□□□□ -1.37
VMP1-205ENST00000587470 PROSER1Q86XN7 944 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 ZCCHC14Q8WYQ9 949 aaKnown RBP6.48□□□□□ -1.37
VMP1-205ENST00000587470 DLL4Q9NR61 685 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 RBPJLQ9UBG7 517 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 FTSJ1Q9UET6 329 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 PFDN2Q9UHV9 154 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 TRAF6Q9Y4K3 522 aa6.48□□□□□ -1.37
VMP1-205ENST00000587470 LTFP02788 710 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 CKMP06732 381 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 SUMO1P63165 101 aaKnown RBP6.47□□□□□ -1.37
VMP1-205ENST00000587470 RBL2Q08999 1139 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 PAK1Q13153 545 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 ZNF827Q17R98 1081 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 LONRF2Q1L5Z9 754 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 FAM209AQ5JX71 171 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 TRMT10BQ6PF06 316 aaKnown RBP6.47□□□□□ -1.37
VMP1-205ENST00000587470 KCTD1Q719H9 257 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 LRP10Q7Z4F1 713 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 PLEKHH3Q7Z736 793 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 DTX3Q8N9I9 347 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 BORCS6Q96GS4 357 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 ZNF536O15090 1300 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 CFTRP13569 1480 aa6.47□□□□□ -1.37
VMP1-205ENST00000587470 WNT9AO14904 365 aa6.46□□□□□ -1.38
VMP1-205ENST00000587470 B4GALT3O60512 393 aa6.46□□□□□ -1.38
VMP1-205ENST00000587470 CHGBP05060 677 aa6.46□□□□□ -1.38
VMP1-205ENST00000587470 ENO2P09104 434 aaPredicted RBP6.46□□□□□ -1.38
VMP1-205ENST00000587470 NAT1P18440 290 aa6.46□□□□□ -1.38
VMP1-205ENST00000587470 MAGEA10P43363 369 aaPredicted RBP6.46□□□□□ -1.38
VMP1-205ENST00000587470 FOXB2Q5VYV0 432 aa6.46□□□□□ -1.38
VMP1-205ENST00000587470 MBD6Q96DN6 1003 aa6.46□□□□□ -1.38
VMP1-205ENST00000587470 SAMD11Q96NU1 681 aa6.46□□□□□ -1.38
VMP1-205ENST00000587470 TELO2Q9Y4R8 837 aa6.46□□□□□ -1.38
VMP1-205ENST00000587470 EIF4G3O43432 1585 aaKnown RBP6.45□□□□□ -1.38
VMP1-205ENST00000587470 DIAPH1O60610 1272 aaKnown RBP6.45□□□□□ -1.38
VMP1-205ENST00000587470 FAM153BP0C7A2 387 aa6.45□□□□□ -1.38
VMP1-205ENST00000587470 GABREP78334 506 aa6.45□□□□□ -1.38
VMP1-205ENST00000587470 SERINC3Q13530 473 aa6.45□□□□□ -1.38
VMP1-205ENST00000587470 PKN3Q6P5Z2 889 aa6.45□□□□□ -1.38
VMP1-205ENST00000587470 MTDHQ86UE4 582 aaKnown RBP6.45□□□□□ -1.38
VMP1-205ENST00000587470 NLGN4XQ8N0W4 816 aa6.45□□□□□ -1.38
VMP1-205ENST00000587470 KLHL36Q8N4N3 616 aa6.45□□□□□ -1.38
VMP1-205ENST00000587470 DHRS4Q9BTZ2 278 aa6.45□□□□□ -1.38
VMP1-205ENST00000587470 BARX1Q9HBU1 254 aaPredicted RBP6.45□□□□□ -1.38
VMP1-205ENST00000587470 SMPD4Q9NXE4 827 aa6.45□□□□□ -1.38
VMP1-205ENST00000587470 PCDHA8Q9Y5H6 950 aa6.45□□□□□ -1.38
VMP1-205ENST00000587470 KDM2BQ8NHM5 1336 aa6.45□□□□□ -1.38
VMP1-205ENST00000587470 TCRBV5S4A2TA0A5A2 114 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 LAMTOR5O43504 91 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 FBXO21O94952 628 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 C6orf222P0C671 652 aaPredicted RBP6.44□□□□□ -1.38
VMP1-205ENST00000587470 COL6A1P12109 1028 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 PFKPQ01813 784 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 NFATC3Q12968 1075 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 GPR19Q15760 415 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 SMAD2Q15796 467 aaKnown RBP6.44□□□□□ -1.38
VMP1-205ENST00000587470 SKIDA1Q1XH10 827 aa6.44□□□□□ -1.38
VMP1-205ENST00000587470 ZC3H12BQ5HYM0 836 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms