RNA–Protein interactions for RNA: ENST00000587098.1

CCDC130-207, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 617 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-207ENST00000587098 PRR16Q569H4 304 aa16.65■□□□□ 0.26
CCDC130-207ENST00000587098 C9orf50Q5SZB4 431 aa16.65■□□□□ 0.26
CCDC130-207ENST00000587098 TMEM199Q8N511 208 aa16.65■□□□□ 0.26
CCDC130-207ENST00000587098 LENG9Q96B70 501 aa16.65■□□□□ 0.26
CCDC130-207ENST00000587098 PCYT2Q99447 389 aa16.65■□□□□ 0.26
CCDC130-207ENST00000587098 WNT8AQ9H1J5 351 aa16.65■□□□□ 0.26
CCDC130-207ENST00000587098 SH2B1Q9NRF2 756 aaPredicted RBP16.65■□□□□ 0.26
CCDC130-207ENST00000587098 NOD1Q9Y239 953 aa16.65■□□□□ 0.26
CCDC130-207ENST00000587098 DDX39AO00148 427 aaKnown RBP16.64■□□□□ 0.25
CCDC130-207ENST00000587098 IPO5O00410 1097 aaKnown RBP16.64■□□□□ 0.25
CCDC130-207ENST00000587098 SMIM10L2AP0DMW4 78 aa16.64■□□□□ 0.25
CCDC130-207ENST00000587098 SMIM10L2BP0DMW5 78 aa16.64■□□□□ 0.25
CCDC130-207ENST00000587098 ACTR2P61160 394 aa16.64■□□□□ 0.25
CCDC130-207ENST00000587098 SETQ01105 290 aaPredicted RBP16.64■□□□□ 0.25
CCDC130-207ENST00000587098 PPIGQ13427 754 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCDC130-207ENST00000587098 NONOQ15233 471 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCDC130-207ENST00000587098 C16orf59Q7L2K0 433 aa16.64■□□□□ 0.25
CCDC130-207ENST00000587098 KRT25Q7Z3Z0 450 aa16.64■□□□□ 0.25
CCDC130-207ENST00000587098 SCLYQ96I15 445 aa16.64■□□□□ 0.25
CCDC130-207ENST00000587098 LLPHQ9BRT6 129 aaKnown RBP16.64■□□□□ 0.25
CCDC130-207ENST00000587098 ZNF577Q9BSK1 485 aa16.64■□□□□ 0.25
CCDC130-207ENST00000587098 RNPEPQ9H4A4 650 aa16.64■□□□□ 0.25
CCDC130-207ENST00000587098 ST18O60284 1047 aa16.63■□□□□ 0.25
CCDC130-207ENST00000587098 LGR5O75473 907 aa16.63■□□□□ 0.25
CCDC130-207ENST00000587098 ATG7O95352 703 aa16.63■□□□□ 0.25
CCDC130-207ENST00000587098 CCNE2O96020 404 aa16.63■□□□□ 0.25
CCDC130-207ENST00000587098 ACRP10323 421 aa16.63■□□□□ 0.25
CCDC130-207ENST00000587098 FOSBP53539 338 aa16.63■□□□□ 0.25
CCDC130-207ENST00000587098 INF2Q27J81 1249 aa16.63■□□□□ 0.25
CCDC130-207ENST00000587098 DHX38Q92620 1227 aaKnown RBP16.63■□□□□ 0.25
CCDC130-207ENST00000587098 SMARCAD1Q9H4L7 1026 aa16.63■□□□□ 0.25
CCDC130-207ENST00000587098 ZNF215Q9UL58 517 aaPredicted RBP16.63■□□□□ 0.25
CCDC130-207ENST00000587098 KAT6AQ92794 2004 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 CYP3A7-CYP3A51PA0A087WV96 503 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 CCDC194A0A1B0GVG4 234 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 C17orf102A2RUQ5 167 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 SOX1O00570 391 aaPredicted RBP16.62■□□□□ 0.25
CCDC130-207ENST00000587098 MSH4O15457 936 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 CD2BP2O95400 341 aaKnown RBP16.62■□□□□ 0.25
CCDC130-207ENST00000587098 TDP2O95551 362 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 CYP3A7P24462 503 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 MARK3P27448 753 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 HOXC8P31273 242 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 NR5A1Q13285 461 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 BFSP2Q13515 415 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 LRIT3Q3SXY7 679 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 Q4G0T1 1027 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 EARS2Q5JPH6 523 aaKnown RBP16.62■□□□□ 0.25
CCDC130-207ENST00000587098 TMEM240Q5SV17 173 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 KRT40Q6A162 431 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 RETREG2Q8NC44 543 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 GLG1Q92896 1179 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 VWCEQ96DN2 955 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.62■□□□□ 0.25
CCDC130-207ENST00000587098 IL23AQ9NPF7 189 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 TBC1D22BQ9NU19 505 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 SETD4Q9NVD3 440 aa16.62■□□□□ 0.25
CCDC130-207ENST00000587098 PITPNM1O00562 1244 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 TREHO43280 583 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 IQCF3P0C7M6 154 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 KRT2P35908 639 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 PTK7Q13308 1070 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 ABHD15Q6UXT9 468 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 PIK3AP1Q6ZUJ8 805 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 ZNF365Q70YC5 407 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 IL27Q8NEV9 243 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 CAGE1Q8TC20 777 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 TNFRSF25Q93038 417 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 ATP6V0A1Q93050 837 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 WNT8BQ93098 351 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 MBOAT7Q96N66 472 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 ERAP1Q9NZ08 941 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 EMSYQ7Z589 1322 aa16.61■□□□□ 0.25
CCDC130-207ENST00000587098 IGKV6D-21A0A0A0MT36 114 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 FAM205CA6NFA0 338 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 BTBD18B2RXH4 712 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 MMP1P03956 469 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 STAT5BP51692 787 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 ADAM17P78536 824 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 GUCY1B3Q02153 619 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 TRIM29Q14134 588 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 TRIM71Q2Q1W2 868 aaKnown RBP16.6■□□□□ 0.25
CCDC130-207ENST00000587098 LETM2Q2VYF4 491 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 MOXD1Q6UVY6 613 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 PLPPR4Q7Z2D5 763 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 SLC5A5Q92911 643 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 GJA10Q969M2 543 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 LRCH3Q96II8 777 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 AZI2Q9H6S1 392 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 BRMS1Q9HCU9 246 aa16.6■□□□□ 0.25
CCDC130-207ENST00000587098 GNAT1P11488 350 aa16.59■□□□□ 0.25
CCDC130-207ENST00000587098 CKBP12277 381 aa16.59■□□□□ 0.25
CCDC130-207ENST00000587098 HMGN5P82970 282 aaKnown RBP16.59■□□□□ 0.25
CCDC130-207ENST00000587098 RBL2Q08999 1139 aa16.59■□□□□ 0.25
CCDC130-207ENST00000587098 ZNF746Q6NUN9 644 aaPredicted RBP16.59■□□□□ 0.25
CCDC130-207ENST00000587098 DEFB128Q7Z7B8 93 aa16.59■□□□□ 0.25
CCDC130-207ENST00000587098 NEK8Q86SG6 692 aa16.59■□□□□ 0.25
CCDC130-207ENST00000587098 SERINC5Q86VE9 423 aa16.59■□□□□ 0.25
CCDC130-207ENST00000587098 DIS3L2Q8IYB7 885 aaKnown RBP16.59■□□□□ 0.25
CCDC130-207ENST00000587098 RPUSD2Q8IZ73 545 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms