RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 CDHR1Q96JP9 859 aa23.93■■□□□ 1.42
SNX11-207ENST00000580875 YME1L1Q96TA2 773 aa23.93■■□□□ 1.42
SNX11-207ENST00000580875 OSBPL7Q9BZF2 842 aa23.93■■□□□ 1.42
SNX11-207ENST00000580875 PSTPIP2Q9H939 334 aa23.93■■□□□ 1.42
SNX11-207ENST00000580875 NRCAMQ92823 1304 aa23.92■■□□□ 1.42
SNX11-207ENST00000580875 SH2B2O14492 632 aaPredicted RBP23.92■■□□□ 1.42
SNX11-207ENST00000580875 CALM1P0DP23 149 aa23.92■■□□□ 1.42
SNX11-207ENST00000580875 CALM2P0DP24 149 aa23.92■■□□□ 1.42
SNX11-207ENST00000580875 CALM3P0DP25 149 aa23.92■■□□□ 1.42
SNX11-207ENST00000580875 FAM26DQ5JW98 314 aa23.92■■□□□ 1.42
SNX11-207ENST00000580875 SAMD11Q96NU1 681 aa23.92■■□□□ 1.42
SNX11-207ENST00000580875 MICAL3Q7RTP6 2002 aa23.92■■□□□ 1.42
SNX11-207ENST00000580875 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.91■■□□□ 1.42
SNX11-207ENST00000580875 TCF7P36402 384 aaPredicted RBP23.91■■□□□ 1.42
SNX11-207ENST00000580875 LIFRP42702 1097 aa23.91■■□□□ 1.42
SNX11-207ENST00000580875 CMTR1Q8N1G2 835 aaKnown RBP23.91■■□□□ 1.42
SNX11-207ENST00000580875 LSG1Q9H089 658 aaKnown RBP23.91■■□□□ 1.42
SNX11-207ENST00000580875 RAPGEFL1Q9UHV5 662 aa23.91■■□□□ 1.42
SNX11-207ENST00000580875 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.9■■□□□ 1.42
SNX11-207ENST00000580875 ATP9AO75110 1047 aa23.9■■□□□ 1.42
SNX11-207ENST00000580875 UPP2O95045 317 aa23.9■■□□□ 1.42
SNX11-207ENST00000580875 KCNA2P16389 499 aa23.9■■□□□ 1.42
SNX11-207ENST00000580875 RXRAP19793 462 aa23.9■■□□□ 1.42
SNX11-207ENST00000580875 PTPROQ16827 1216 aa23.9■■□□□ 1.42
SNX11-207ENST00000580875 EPC2Q52LR7 807 aa23.9■■□□□ 1.42
SNX11-207ENST00000580875 TAF2Q6P1X5 1199 aa23.9■■□□□ 1.42
SNX11-207ENST00000580875 MRPL38Q96DV4 380 aaKnown RBP23.9■■□□□ 1.42
SNX11-207ENST00000580875 IFIH1Q9BYX4 1025 aaKnown RBP23.9■■□□□ 1.42
SNX11-207ENST00000580875 UBE2ZQ9H832 354 aaPredicted RBP23.9■■□□□ 1.42
SNX11-207ENST00000580875 SLC12A7Q9Y666 1083 aa23.9■■□□□ 1.42
SNX11-207ENST00000580875 DOCK5Q9H7D0 1870 aa23.9■■□□□ 1.42
SNX11-207ENST00000580875 SLC27A2O14975 620 aa23.89■■□□□ 1.41
SNX11-207ENST00000580875 ITGB5P18084 799 aa23.89■■□□□ 1.41
SNX11-207ENST00000580875 RPAINQ86UA6 219 aa23.89■■□□□ 1.41
SNX11-207ENST00000580875 SEPT1Q8WYJ6 367 aa23.89■■□□□ 1.41
SNX11-207ENST00000580875 CHRNA1P02708 482 aa23.88■■□□□ 1.41
SNX11-207ENST00000580875 MTMR1Q13613 665 aa23.88■■□□□ 1.41
SNX11-207ENST00000580875 ERAP1Q9NZ08 941 aa23.88■■□□□ 1.41
SNX11-207ENST00000580875 UBIAD1Q9Y5Z9 338 aa23.88■■□□□ 1.41
SNX11-207ENST00000580875 COL4A6Q14031 1691 aa23.88■■□□□ 1.41
SNX11-207ENST00000580875 SPDYE3A6NKU9 549 aa23.87■■□□□ 1.41
SNX11-207ENST00000580875 H3BNC9 293 aa23.87■■□□□ 1.41
SNX11-207ENST00000580875 PPFIA1Q13136 1202 aa23.87■■□□□ 1.41
SNX11-207ENST00000580875 COL9A3Q14050 684 aaPredicted RBP23.87■■□□□ 1.41
SNX11-207ENST00000580875 UBE2SQ16763 222 aa23.87■■□□□ 1.41
SNX11-207ENST00000580875 LEXMQ3ZCV2 418 aa23.87■■□□□ 1.41
SNX11-207ENST00000580875 RUFY4Q6ZNE9 571 aa23.87■■□□□ 1.41
SNX11-207ENST00000580875 TMTC3Q6ZXV5 915 aa23.87■■□□□ 1.41
SNX11-207ENST00000580875 RSPH3Q86UC2 560 aa23.87■■□□□ 1.41
SNX11-207ENST00000580875 CCDC82Q8N4S0 544 aa23.87■■□□□ 1.41
SNX11-207ENST00000580875 FANCBQ8NB91 859 aa23.87■■□□□ 1.41
SNX11-207ENST00000580875 ESYT1Q9BSJ8 1104 aa23.87■■□□□ 1.41
SNX11-207ENST00000580875 EPHX3Q9H6B9 360 aa23.87■■□□□ 1.41
SNX11-207ENST00000580875 GSTTP1A0A1W2PQM5 241 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 hCG_1642624A0A1W2PR95 340 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 MAFGO15525 162 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 KCNA5P22460 613 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 MARK3P27448 753 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 NECTIN1Q15223 517 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 TIGD5Q53EQ6 642 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 CREB3L3Q68CJ9 461 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 RAB11FIP4Q86YS3 637 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 TMEM192Q8IY95 271 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 GLG1Q92896 1179 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 SMARCAD1Q9H4L7 1026 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 EHMT1Q9H9B1 1298 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 TUBE1Q9UJT0 475 aa23.86■■□□□ 1.41
SNX11-207ENST00000580875 GHRP10912 638 aa23.85■■□□□ 1.41
SNX11-207ENST00000580875 GPM6BQ13491 265 aa23.85■■□□□ 1.41
SNX11-207ENST00000580875 GRIK4Q16099 956 aa23.85■■□□□ 1.41
SNX11-207ENST00000580875 HEATR3Q7Z4Q2 680 aa23.85■■□□□ 1.41
SNX11-207ENST00000580875 IL17RAQ96F46 866 aa23.85■■□□□ 1.41
SNX11-207ENST00000580875 LRRC2Q9BYS8 371 aa23.85■■□□□ 1.41
SNX11-207ENST00000580875 JADE2Q9NQC1 790 aa23.85■■□□□ 1.41
SNX11-207ENST00000580875 PKD2L1Q9P0L9 805 aa23.85■■□□□ 1.41
SNX11-207ENST00000580875 PCDHA6Q9UN73 950 aa23.85■■□□□ 1.41
SNX11-207ENST00000580875 PCDHA8Q9Y5H6 950 aa23.85■■□□□ 1.41
SNX11-207ENST00000580875 MBLAC1A4D2B0 266 aaPredicted RBP23.84■■□□□ 1.41
SNX11-207ENST00000580875 MGAT3Q09327 533 aa23.84■■□□□ 1.41
SNX11-207ENST00000580875 SGMS1Q86VZ5 419 aa23.84■■□□□ 1.41
SNX11-207ENST00000580875 MICU3Q86XE3 530 aa23.84■■□□□ 1.41
SNX11-207ENST00000580875 BANK1Q8NDB2 785 aa23.84■■□□□ 1.41
SNX11-207ENST00000580875 ANO2Q9NQ90 1003 aa23.84■■□□□ 1.41
SNX11-207ENST00000580875 BRWD1Q9NSI6 2320 aa23.83■■□□□ 1.41
SNX11-207ENST00000580875 LPIN1Q14693 890 aa23.83■■□□□ 1.41
SNX11-207ENST00000580875 MARCH8Q5T0T0 291 aa23.83■■□□□ 1.41
SNX11-207ENST00000580875 SYNE3Q6ZMZ3 975 aa23.83■■□□□ 1.41
SNX11-207ENST00000580875 FIBCD1Q8N539 461 aa23.83■■□□□ 1.41
SNX11-207ENST00000580875 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.83■■□□□ 1.41
SNX11-207ENST00000580875 JPH1Q9HDC5 661 aaPredicted RBP23.83■■□□□ 1.41
SNX11-207ENST00000580875 RPLP2P05387 115 aaKnown RBP23.82■■□□□ 1.4
SNX11-207ENST00000580875 DNAJB3Q8WWF6 145 aa23.82■■□□□ 1.4
SNX11-207ENST00000580875 PUS10Q3MIT2 529 aaKnown RBP23.81■■□□□ 1.4
SNX11-207ENST00000580875 TMEM31Q5JXX7 168 aa23.81■■□□□ 1.4
SNX11-207ENST00000580875 RNF20Q5VTR2 975 aa23.81■■□□□ 1.4
SNX11-207ENST00000580875 PTCRAQ6ISU1 281 aaPredicted RBP23.81■■□□□ 1.4
SNX11-207ENST00000580875 SKAP1Q86WV1 359 aa23.81■■□□□ 1.4
SNX11-207ENST00000580875 NEK9Q8TD19 979 aa23.81■■□□□ 1.4
SNX11-207ENST00000580875 KHSRPQ92945 711 aaKnown RBP eCLIP23.81■■□□□ 1.4
SNX11-207ENST00000580875 LRFN3Q9BTN0 628 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms