RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 ARHGAP4P98171 946 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 TRDNQ13061 729 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 GPM6BQ13491 265 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 E2F4Q16254 413 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 AAK1Q2M2I8 961 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 EPC2Q52LR7 807 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 PLEKHG4Q58EX7 1191 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 TTC22Q5TAA0 569 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 SERINC5Q86VE9 423 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 SKAP1Q86WV1 359 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 TICAM2Q86XR7 235 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 TRIM50Q86XT4 487 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 TMEM192Q8IY95 271 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 SRBD1Q8N5C6 995 aaKnown RBP4.44□□□□□ -1.7
NUP85-209ENST00000578987 NCOA7Q8NI08 942 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 SMARCC2Q8TAQ2 1214 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 IGDCC4Q8TDY8 1250 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 TOP1MTQ969P6 601 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 FAM122AQ96E09 287 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 UIMC1Q96RL1 719 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 GPR20Q99678 358 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 LRRC2Q9BYS8 371 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 UBE2ZQ9H832 354 aaPredicted RBP4.44□□□□□ -1.7
NUP85-209ENST00000578987 MAP3K20Q9NYL2 800 aaKnown RBP4.44□□□□□ -1.7
NUP85-209ENST00000578987 COG5Q9UP83 839 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 SSUH2Q9Y2M2 353 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 INSL6Q9Y581 213 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 MUC3AQ02505 3323 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.43□□□□□ -1.7
NUP85-209ENST00000578987 GSTTP1A0A1W2PQM5 241 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 PI4K2BG5E9Z4 385 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 NOP56O00567 594 aaKnown RBP4.43□□□□□ -1.7
NUP85-209ENST00000578987 ENPP3O14638 875 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 MEIS2O14770 477 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 GRM6O15303 877 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 PLEKHA8P1O95397 391 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 PARNO95453 639 aaKnown RBP4.43□□□□□ -1.7
NUP85-209ENST00000578987 GHRP10912 638 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 HOXD8P13378 290 aaPredicted RBP4.43□□□□□ -1.7
NUP85-209ENST00000578987 MARK3P27448 753 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 ICAM3P32942 547 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 GTF2F1P35269 517 aaKnown RBP eCLIP4.43□□□□□ -1.7
NUP85-209ENST00000578987 TCF7P36402 384 aaPredicted RBP4.43□□□□□ -1.7
NUP85-209ENST00000578987 IGBP1P78318 339 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 HTRA4P83105 476 aaPredicted RBP4.43□□□□□ -1.7
NUP85-209ENST00000578987 GHRHRQ02643 423 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 RBL2Q08999 1139 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 TMEM62Q0P6H9 643 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 TROAPQ12815 778 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 CLUL1Q15846 466 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 UBE2SQ16763 222 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 TCEAL5Q5H9L2 206 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 KCNV1Q6PIU1 500 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 NFXL1Q6ZNB6 911 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 RUFY4Q6ZNE9 571 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 CATIPQ7Z7H3 387 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 RALYLQ86SE5 291 aaKnown RBP4.43□□□□□ -1.7
NUP85-209ENST00000578987 RTN4RL1Q86UN2 441 aaPredicted RBP4.43□□□□□ -1.7
NUP85-209ENST00000578987 FAM178BQ8IXR5 827 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 ZNF654Q8IZM8 581 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 LMBR1Q8WVP7 490 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 TRAPPC12Q8WVT3 735 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 DNAJB3Q8WWF6 145 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 RUFY2Q8WXA3 655 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 SEPT8Q92599 483 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 PGBD1Q96JS3 809 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 YME1L1Q96TA2 773 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 USP26Q9BXU7 913 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 MAF1Q9H063 256 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 IGFLR1Q9H665 355 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 LY9Q9HBG7 655 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 C11orf16Q9NQ32 467 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 LMCD1Q9NZU5 365 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 RBM8AQ9Y5S9 174 aaKnown RBP4.43□□□□□ -1.7
NUP85-209ENST00000578987 NCOR1O75376 2440 aa4.43□□□□□ -1.7
NUP85-209ENST00000578987 TRANK1O15050 2925 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 C5orf42Q9H799 3197 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 GRXCR2A6NFK2 248 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 H3BNC9 293 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 ADAMTS3O15072 1205 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 LINC01565O15544 149 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 SGSM2O43147 1006 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 FIBPO43427 364 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 PRC1O43663 620 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 TRAK2O60296 914 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 EFCAB14O75071 495 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 PPFIA3O75145 1194 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 GNAT1P11488 350 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 ITGB5P18084 799 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 DNAJB1P25685 340 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 HOXC8P31273 242 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 SSTR3P32745 418 aaPredicted RBP4.42□□□□□ -1.7
NUP85-209ENST00000578987 CTNNB1P35222 781 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 PLA2G5P39877 138 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 GATMP50440 423 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 ADAM17P78536 824 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 DLX2Q07687 328 aaPredicted RBP4.42□□□□□ -1.7
NUP85-209ENST00000578987 NEDD9Q14511 834 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 GNPTABQ3T906 1256 aa4.42□□□□□ -1.7
NUP85-209ENST00000578987 LEXMQ3ZCV2 418 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 277.8 ms