RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 NSMFQ6X4W1 530 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 CAGE1Q8TC20 777 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 KHSRPQ92945 711 aaKnown RBP eCLIP15.68■□□□□ 0.1
RPAIN-209ENST00000571558 KCNH6Q9H252 994 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 PCDHA1Q9Y5I3 950 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.68■□□□□ 0.1
RPAIN-209ENST00000571558 MYL3P08590 195 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 TRAF1Q13077 416 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 RESTQ13127 1097 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 MUM1L1Q5H9M0 696 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 FAM47CQ5HY64 1035 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 TMEM63BQ5T3F8 832 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 DAGLBQ8NCG7 672 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 CCDC148Q8NFR7 591 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 OXER1Q8TDS5 423 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 AFAP1L1Q8TED9 768 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 TNFRSF25Q93038 417 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 CCPG1Q9ULG6 757 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 NOD1Q9Y239 953 aa15.68■□□□□ 0.1
RPAIN-209ENST00000571558 M0R2N6 131 aa15.67■□□□□ 0.1
RPAIN-209ENST00000571558 EFCAB14O75071 495 aa15.67■□□□□ 0.1
RPAIN-209ENST00000571558 PTGS1P23219 599 aa15.67■□□□□ 0.1
RPAIN-209ENST00000571558 U2AF2P26368 475 aaKnown RBP eCLIP15.67■□□□□ 0.12e-8■□□□□ 9.8
RPAIN-209ENST00000571558 ALDH5A1P51649 535 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-209ENST00000571558 NLRP5P59047 1200 aa15.67■□□□□ 0.1
RPAIN-209ENST00000571558 PUS10Q3MIT2 529 aaKnown RBP15.67■□□□□ 0.1
RPAIN-209ENST00000571558 LEXMQ3ZCV2 418 aa15.67■□□□□ 0.1
RPAIN-209ENST00000571558 USH1GQ495M9 461 aa15.67■□□□□ 0.1
RPAIN-209ENST00000571558 GALNT17Q6IS24 598 aa15.67■□□□□ 0.1
RPAIN-209ENST00000571558 FAM178BQ8IXR5 827 aa15.67■□□□□ 0.1
RPAIN-209ENST00000571558 DIS3L2Q8IYB7 885 aaKnown RBP15.67■□□□□ 0.1
RPAIN-209ENST00000571558 GJD3Q8N144 294 aa15.67■□□□□ 0.1
RPAIN-209ENST00000571558 OR6J1Q8NGC5 347 aa15.67■□□□□ 0.1
RPAIN-209ENST00000571558 SCFD2Q8WU76 684 aa15.67■□□□□ 0.1
RPAIN-209ENST00000571558 CCDC12Q8WUD4 166 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-209ENST00000571558 ZBED2Q9BTP6 218 aa15.67■□□□□ 0.1
RPAIN-209ENST00000571558 ABCB11O95342 1321 aa15.66■□□□□ 0.1
RPAIN-209ENST00000571558 SMCO2A6NFE2 343 aa15.66■□□□□ 0.1
RPAIN-209ENST00000571558 BTBD18B2RXH4 712 aa15.66■□□□□ 0.1
RPAIN-209ENST00000571558 B4DLN1 442 aa15.66■□□□□ 0.1
RPAIN-209ENST00000571558 ARHGEF15O94989 841 aa15.66■□□□□ 0.1
RPAIN-209ENST00000571558 F13A1P00488 732 aa15.66■□□□□ 0.1
RPAIN-209ENST00000571558 CALML3P27482 149 aa15.66■□□□□ 0.1
RPAIN-209ENST00000571558 MRPL12P52815 198 aaKnown RBP15.66■□□□□ 0.1
RPAIN-209ENST00000571558 ALYREFQ86V81 257 aaKnown RBP15.66■□□□□ 0.1
RPAIN-209ENST00000571558 CLEC4DQ8WXI8 215 aa15.66■□□□□ 0.1
RPAIN-209ENST00000571558 RAD9AQ99638 391 aa15.66■□□□□ 0.1
RPAIN-209ENST00000571558 FOXP1Q9H334 677 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-209ENST00000571558 UBE2ZQ9H832 354 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-209ENST00000571558 CD320Q9NPF0 282 aa15.66■□□□□ 0.1
RPAIN-209ENST00000571558 RIC8AQ9NPQ8 531 aa15.66■□□□□ 0.1
RPAIN-209ENST00000571558 PCDHA4Q9UN74 947 aa15.66■□□□□ 0.1
RPAIN-209ENST00000571558 ABHD14A-ACY1A0A1B0GW23 586 aa15.65■□□□□ 0.1
RPAIN-209ENST00000571558 FAM86C2PA6NEL3 165 aa15.65■□□□□ 0.1
RPAIN-209ENST00000571558 ERVK-21P61565 698 aa15.65■□□□□ 0.1
RPAIN-209ENST00000571558 WDR5P61964 334 aaKnown RBP15.65■□□□□ 0.1
RPAIN-209ENST00000571558 GHRHRQ02643 423 aa15.65■□□□□ 0.1
RPAIN-209ENST00000571558 NR5A1Q13285 461 aa15.65■□□□□ 0.1
RPAIN-209ENST00000571558 BAATQ14032 418 aaPredicted RBP15.65■□□□□ 0.1
RPAIN-209ENST00000571558 FOXD4L5Q5VV16 416 aaPredicted RBP15.65■□□□□ 0.1
RPAIN-209ENST00000571558 FERMT3Q86UX7 667 aa15.65■□□□□ 0.1
RPAIN-209ENST00000571558 SESTD1Q86VW0 696 aa15.65■□□□□ 0.1
RPAIN-209ENST00000571558 BLIDQ8IZY5 108 aa15.65■□□□□ 0.1
RPAIN-209ENST00000571558 FOXD4L4Q8WXT5 416 aaPredicted RBP15.65■□□□□ 0.1
RPAIN-209ENST00000571558 TGS1Q96RS0 853 aaKnown RBP15.65■□□□□ 0.1
RPAIN-209ENST00000571558 C6orf50Q9HD87 102 aa15.65■□□□□ 0.1
RPAIN-209ENST00000571558 DDX49Q9Y6V7 483 aaKnown RBP15.65■□□□□ 0.1
RPAIN-209ENST00000571558 SCN10AQ9Y5Y9 1956 aa15.65■□□□□ 0.1
RPAIN-209ENST00000571558 GJB5O95377 273 aa15.64■□□□□ 0.09
RPAIN-209ENST00000571558 GNA11P29992 359 aa15.64■□□□□ 0.09
RPAIN-209ENST00000571558 KRT2P35908 639 aa15.64■□□□□ 0.09
RPAIN-209ENST00000571558 CLK2P49760 499 aaKnown RBP15.64■□□□□ 0.09
RPAIN-209ENST00000571558 ADCY7P51828 1080 aa15.64■□□□□ 0.09
RPAIN-209ENST00000571558 RBL2Q08999 1139 aa15.64■□□□□ 0.09
RPAIN-209ENST00000571558 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
RPAIN-209ENST00000571558 CNKSR3Q6P9H4 555 aa15.64■□□□□ 0.09
RPAIN-209ENST00000571558 NOSTRINQ8IVI9 506 aa15.64■□□□□ 0.09
RPAIN-209ENST00000571558 TEX2Q8IWB9 1127 aa15.64■□□□□ 0.09
RPAIN-209ENST00000571558 DNERQ8NFT8 737 aa15.64■□□□□ 0.09
RPAIN-209ENST00000571558 MAF1Q9H063 256 aa15.64■□□□□ 0.09
RPAIN-209ENST00000571558 ZSCAN16Q9H4T2 348 aaPredicted RBP15.64■□□□□ 0.09
RPAIN-209ENST00000571558 PSTPIP2Q9H939 334 aa15.64■□□□□ 0.09
RPAIN-209ENST00000571558 SUGCTQ9HAC7 445 aa15.64■□□□□ 0.09
RPAIN-209ENST00000571558 MRPL11Q9Y3B7 192 aaKnown RBP15.64■□□□□ 0.09
RPAIN-209ENST00000571558 MEIS2O14770 477 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 CXCL10P02778 98 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 SELPP16109 830 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 EDNRBP24530 442 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 PDE4DQ08499 809 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 PTGISQ16647 500 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 CSPP1Q1MSJ5 1256 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 MCTP1Q6DN14 999 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 BRAPQ7Z569 592 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 TNPO1Q92973 898 aaKnown RBP15.63■□□□□ 0.09
RPAIN-209ENST00000571558 CUL5Q93034 780 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 GLT8D2Q9H1C3 349 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 PCDHA6Q9UN73 950 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 PCDHA8Q9Y5H6 950 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 SCN5AQ14524 2016 aa15.63■□□□□ 0.09
RPAIN-209ENST00000571558 TANC1Q9C0D5 1861 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms