RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 ARHGAP4P98171 946 aa16.52■□□□□ 0.24
CIITA-205ENST00000571186 SP4Q02446 784 aa16.52■□□□□ 0.24
CIITA-205ENST00000571186 METTL7BQ6UX53 244 aa16.52■□□□□ 0.24
CIITA-205ENST00000571186 TRIM50Q86XT4 487 aa16.52■□□□□ 0.24
CIITA-205ENST00000571186 APBB2Q92870 758 aa16.52■□□□□ 0.24
CIITA-205ENST00000571186 IL17RAQ96F46 866 aa16.52■□□□□ 0.24
CIITA-205ENST00000571186 GPR20Q99678 358 aa16.52■□□□□ 0.24
CIITA-205ENST00000571186 ESYT1Q9BSJ8 1104 aa16.52■□□□□ 0.24
CIITA-205ENST00000571186 CLDND1Q9NY35 253 aa16.52■□□□□ 0.24
CIITA-205ENST00000571186 ZNF215Q9UL58 517 aaPredicted RBP16.52■□□□□ 0.24
CIITA-205ENST00000571186 TTC3P53804 2025 aa16.52■□□□□ 0.23
CIITA-205ENST00000571186 ERICH2A1L162 156 aa16.51■□□□□ 0.23
CIITA-205ENST00000571186 CYTH3O43739 400 aa16.51■□□□□ 0.23
CIITA-205ENST00000571186 ICAM3P32942 547 aa16.51■□□□□ 0.23
CIITA-205ENST00000571186 CTNNB1P35222 781 aa16.51■□□□□ 0.23
CIITA-205ENST00000571186 FIBCD1Q8N539 461 aa16.51■□□□□ 0.23
CIITA-205ENST00000571186 INPP4AQ96PE3 977 aaPredicted RBP16.51■□□□□ 0.23
CIITA-205ENST00000571186 FIBPO43427 364 aa16.5■□□□□ 0.23
CIITA-205ENST00000571186 DCXO43602 365 aa16.5■□□□□ 0.23
CIITA-205ENST00000571186 CYP21A2P08686 494 aa16.5■□□□□ 0.23
CIITA-205ENST00000571186 SEMA3FQ13275 785 aa16.5■□□□□ 0.23
CIITA-205ENST00000571186 FAM26DQ5JW98 314 aa16.5■□□□□ 0.23
CIITA-205ENST00000571186 ALYREFQ86V81 257 aaKnown RBP16.5■□□□□ 0.23
CIITA-205ENST00000571186 MAP4K1Q92918 833 aa16.5■□□□□ 0.23
CIITA-205ENST00000571186 LSG1Q9H089 658 aaKnown RBP16.5■□□□□ 0.23
CIITA-205ENST00000571186 SENP2Q9HC62 589 aa16.5■□□□□ 0.23
CIITA-205ENST00000571186 TELO2Q9Y4R8 837 aa16.5■□□□□ 0.23
CIITA-205ENST00000571186 U3KPZ7 1027 aaPredicted RBP16.5■□□□□ 0.23
CIITA-205ENST00000571186 NCK2O43639 380 aa16.49■□□□□ 0.23
CIITA-205ENST00000571186 CHRNA1P02708 482 aa16.49■□□□□ 0.23
CIITA-205ENST00000571186 ADAM17P78536 824 aa16.49■□□□□ 0.23
CIITA-205ENST00000571186 WTAPQ15007 396 aa16.49■□□□□ 0.23
CIITA-205ENST00000571186 ERICH6BQ5W0A0 696 aa16.49■□□□□ 0.23
CIITA-205ENST00000571186 RPAINQ86UA6 219 aa16.49■□□□□ 0.23
CIITA-205ENST00000571186 SMARCC2Q8TAQ2 1214 aa16.49■□□□□ 0.23
CIITA-205ENST00000571186 LMBR1Q8WVP7 490 aa16.49■□□□□ 0.23
CIITA-205ENST00000571186 PRKAG3Q9UGI9 489 aa16.49■□□□□ 0.23
CIITA-205ENST00000571186 RBM8AQ9Y5S9 174 aaKnown RBP16.49■□□□□ 0.23
CIITA-205ENST00000571186 NRCAMQ92823 1304 aa16.48■□□□□ 0.23
CIITA-205ENST00000571186 POTEB3A0JP26 581 aa16.48■□□□□ 0.23
CIITA-205ENST00000571186 RB1P06400 928 aa16.48■□□□□ 0.23
CIITA-205ENST00000571186 GHRP10912 638 aa16.48■□□□□ 0.23
CIITA-205ENST00000571186 BMPR1AP36894 532 aa16.48■□□□□ 0.23
CIITA-205ENST00000571186 ZP2Q05996 745 aa16.48■□□□□ 0.23
CIITA-205ENST00000571186 SART3Q15020 963 aaKnown RBP16.48■□□□□ 0.23
CIITA-205ENST00000571186 CLUL1Q15846 466 aa16.48■□□□□ 0.23
CIITA-205ENST00000571186 USP17L6PQ6QN14 398 aa16.48■□□□□ 0.23
CIITA-205ENST00000571186 POTEBQ6S5H4 581 aa16.48■□□□□ 0.23
CIITA-205ENST00000571186 CATIPQ7Z7H3 387 aa16.48■□□□□ 0.23
CIITA-205ENST00000571186 CUL5Q93034 780 aa16.48■□□□□ 0.23
CIITA-205ENST00000571186 FRMPD4Q14CM0 1322 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 COL4A6Q14031 1691 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 ENPP3O14638 875 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 GRM6O15303 877 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 CDC45O75419 566 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 LTBRP36941 435 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 TROAPQ12815 778 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 COL19A1Q14993 1142 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 RUFY4Q6ZNE9 571 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 RALYLQ86SE5 291 aaKnown RBP16.47■□□□□ 0.23
CIITA-205ENST00000571186 RSPH3Q86UC2 560 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 NLRX1Q86UT6 975 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 ADHFE1Q8IWW8 467 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 SENP7Q9BQF6 1050 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 C11orf84Q9BUA3 381 aaPredicted RBP16.47■□□□□ 0.23
CIITA-205ENST00000571186 UPF3BQ9BZI7 483 aaKnown RBP16.47■□□□□ 0.23
CIITA-205ENST00000571186 IGFLR1Q9H665 355 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 ANO2Q9NQ90 1003 aa16.47■□□□□ 0.23
CIITA-205ENST00000571186 C19orf67A6NJJ6 358 aa16.46■□□□□ 0.23
CIITA-205ENST00000571186 E7EWF7 191 aa16.46■□□□□ 0.23
CIITA-205ENST00000571186 C5orf67F2Z3F1 127 aa16.46■□□□□ 0.23
CIITA-205ENST00000571186 CSPG5O95196 566 aa16.46■□□□□ 0.23
CIITA-205ENST00000571186 TCF7P36402 384 aaPredicted RBP16.46■□□□□ 0.23
CIITA-205ENST00000571186 HYAL1Q12794 435 aa16.46■□□□□ 0.23
CIITA-205ENST00000571186 BTG3Q14201 252 aaPredicted RBP16.46■□□□□ 0.23
CIITA-205ENST00000571186 PCNX4Q63HM2 1172 aa16.46■□□□□ 0.23
CIITA-205ENST00000571186 XRRA1Q6P2D8 792 aa16.46■□□□□ 0.23
CIITA-205ENST00000571186 GIMAP8Q8ND71 665 aaPredicted RBP16.46■□□□□ 0.23
CIITA-205ENST00000571186 NCOA7Q8NI08 942 aa16.46■□□□□ 0.23
CIITA-205ENST00000571186 LMAN2LQ9H0V9 348 aa16.46■□□□□ 0.23
CIITA-205ENST00000571186 EHMT1Q9H9B1 1298 aa16.46■□□□□ 0.23
CIITA-205ENST00000571186 RWDD3Q9Y3V2 267 aa16.46■□□□□ 0.23
CIITA-205ENST00000571186 ADGRA3Q8IWK6 1321 aa16.45■□□□□ 0.22
CIITA-205ENST00000571186 ZNF318Q5VUA4 2279 aa16.45■□□□□ 0.22
CIITA-205ENST00000571186 MARK3P27448 753 aa16.45■□□□□ 0.22
CIITA-205ENST00000571186 IRS1P35568 1242 aa16.45■□□□□ 0.22
CIITA-205ENST00000571186 DLX2Q07687 328 aaPredicted RBP16.45■□□□□ 0.22
CIITA-205ENST00000571186 PPFIA1Q13136 1202 aa16.45■□□□□ 0.22
CIITA-205ENST00000571186 COL9A3Q14050 684 aaPredicted RBP16.45■□□□□ 0.22
CIITA-205ENST00000571186 LPIN1Q14693 890 aa16.45■□□□□ 0.22
CIITA-205ENST00000571186 CTC1Q2NKJ3 1217 aa16.45■□□□□ 0.22
CIITA-205ENST00000571186 TAF2Q6P1X5 1199 aa16.45■□□□□ 0.22
CIITA-205ENST00000571186 DNAJB3Q8WWF6 145 aa16.45■□□□□ 0.22
CIITA-205ENST00000571186 RRP36Q96EU6 259 aaKnown RBP16.45■□□□□ 0.22
CIITA-205ENST00000571186 MEIS2O14770 477 aa16.44■□□□□ 0.22
CIITA-205ENST00000571186 ATP9AO75110 1047 aa16.44■□□□□ 0.22
CIITA-205ENST00000571186 LINC00271P0C7V0 271 aa16.44■□□□□ 0.22
CIITA-205ENST00000571186 GTF2F1P35269 517 aaKnown RBP eCLIP16.44■□□□□ 0.22
CIITA-205ENST00000571186 MGAT3Q09327 533 aa16.44■□□□□ 0.22
CIITA-205ENST00000571186 GRIK4Q16099 956 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms