RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 SPRED2Q7Z698 418 aa15.07■□□□□ 0
SPG7-221ENST00000569720 TRIM50Q86XT4 487 aa15.07■□□□□ 0
SPG7-221ENST00000569720 CMTR1Q8N1G2 835 aaKnown RBP15.07■□□□□ 0
SPG7-221ENST00000569720 APBB2Q92870 758 aa15.07■□□□□ 0
SPG7-221ENST00000569720 EHMT1Q9H9B1 1298 aa15.07■□□□□ 0
SPG7-221ENST00000569720 ANO2Q9NQ90 1003 aa15.07■□□□□ 0
SPG7-221ENST00000569720 NRCAMQ92823 1304 aa15.07■□□□□ 0
SPG7-221ENST00000569720 XIRP2A4UGR9 3374 aa15.07■□□□□ 0
SPG7-221ENST00000569720 TCF7P36402 384 aaPredicted RBP15.06■□□□□ 0
SPG7-221ENST00000569720 KCNQ1P51787 676 aa15.06■□□□□ 0
SPG7-221ENST00000569720 NECTIN1Q15223 517 aa15.06■□□□□ 0
SPG7-221ENST00000569720 CCDC82Q8N4S0 544 aa15.06■□□□□ 0
SPG7-221ENST00000569720 FANCBQ8NB91 859 aa15.06■□□□□ 0
SPG7-221ENST00000569720 SUGCTQ9HAC7 445 aa15.06■□□□□ 0
SPG7-221ENST00000569720 MAFGO15525 162 aa15.05■□□□□ -0
SPG7-221ENST00000569720 HTRA4P83105 476 aaPredicted RBP15.05■□□□□ -0
SPG7-221ENST00000569720 MTMR1Q13613 665 aa15.05■□□□□ -0
SPG7-221ENST00000569720 TMTC3Q6ZXV5 915 aa15.05■□□□□ -0
SPG7-221ENST00000569720 RSPH3Q86UC2 560 aa15.05■□□□□ -0
SPG7-221ENST00000569720 MICU3Q86XE3 530 aa15.05■□□□□ -0
SPG7-221ENST00000569720 RAB11FIP4Q86YS3 637 aa15.05■□□□□ -0
SPG7-221ENST00000569720 FBXO22Q8NEZ5 403 aa15.05■□□□□ -0
SPG7-221ENST00000569720 LMBR1Q8WVP7 490 aa15.05■□□□□ -0
SPG7-221ENST00000569720 SEPT1Q8WYJ6 367 aa15.05■□□□□ -0
SPG7-221ENST00000569720 SAMD11Q96NU1 681 aa15.05■□□□□ -0
SPG7-221ENST00000569720 YME1L1Q96TA2 773 aa15.05■□□□□ -0
SPG7-221ENST00000569720 LRRC2Q9BYS8 371 aa15.05■□□□□ -0
SPG7-221ENST00000569720 NLRC5Q86WI3 1866 aa15.05■□□□□ -0
SPG7-221ENST00000569720 hCG_1642624A0A1W2PR95 340 aa15.04■□□□□ -0
SPG7-221ENST00000569720 KCNA2P16389 499 aa15.04■□□□□ -0
SPG7-221ENST00000569720 ADAM17P78536 824 aa15.04■□□□□ -0
SPG7-221ENST00000569720 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
SPG7-221ENST00000569720 UBE2SQ16763 222 aa15.04■□□□□ -0
SPG7-221ENST00000569720 FAM26DQ5JW98 314 aa15.04■□□□□ -0
SPG7-221ENST00000569720 TAF2Q6P1X5 1199 aa15.04■□□□□ -0
SPG7-221ENST00000569720 HEATR3Q7Z4Q2 680 aa15.04■□□□□ -0
SPG7-221ENST00000569720 SGMS1Q86VZ5 419 aa15.04■□□□□ -0
SPG7-221ENST00000569720 GLG1Q92896 1179 aa15.04■□□□□ -0
SPG7-221ENST00000569720 TOP1MTQ969P6 601 aa15.04■□□□□ -0
SPG7-221ENST00000569720 IFIH1Q9BYX4 1025 aaKnown RBP15.04■□□□□ -0
SPG7-221ENST00000569720 RBM28Q9NW13 759 aaKnown RBP15.04■□□□□ -0
SPG7-221ENST00000569720 ERAP1Q9NZ08 941 aa15.04■□□□□ -0
SPG7-221ENST00000569720 PCDHA6Q9UN73 950 aa15.04■□□□□ -0
SPG7-221ENST00000569720 PCDHA8Q9Y5H6 950 aa15.04■□□□□ -0
SPG7-221ENST00000569720 UBIAD1Q9Y5Z9 338 aa15.04■□□□□ -0
SPG7-221ENST00000569720 BRWD1Q9NSI6 2320 aa15.03■□□□□ -0
SPG7-221ENST00000569720 ATP9AO75110 1047 aa15.03■□□□□ -0
SPG7-221ENST00000569720 UPP2O95045 317 aa15.03■□□□□ -0
SPG7-221ENST00000569720 ITGB5P18084 799 aa15.03■□□□□ -0
SPG7-221ENST00000569720 PPFIA1Q13136 1202 aa15.03■□□□□ -0
SPG7-221ENST00000569720 TEX2Q8IWB9 1127 aa15.03■□□□□ -0
SPG7-221ENST00000569720 SP7Q8TDD2 431 aaPredicted RBP15.03■□□□□ -0
SPG7-221ENST00000569720 TNPO1Q92973 898 aaKnown RBP15.03■□□□□ -0
SPG7-221ENST00000569720 NECAB3Q96P71 396 aaPredicted RBP15.03■□□□□ -0
SPG7-221ENST00000569720 NEK1Q96PY6 1258 aa15.03■□□□□ -0
SPG7-221ENST00000569720 C17orf80Q9BSJ5 609 aa15.03■□□□□ -0
SPG7-221ENST00000569720 SMARCAD1Q9H4L7 1026 aa15.03■□□□□ -0
SPG7-221ENST00000569720 JADE2Q9NQC1 790 aa15.03■□□□□ -0
SPG7-221ENST00000569720 PKD2L1Q9P0L9 805 aa15.03■□□□□ -0
SPG7-221ENST00000569720 TELO2Q9Y4R8 837 aa15.03■□□□□ -0
SPG7-221ENST00000569720 RALGAPA2Q2PPJ7 1873 aa15.03■□□□□ -0
SPG7-221ENST00000569720 GSTTP1A0A1W2PQM5 241 aa15.02■□□□□ -0
SPG7-221ENST00000569720 RPLP2P05387 115 aaKnown RBP15.02■□□□□ -0
SPG7-221ENST00000569720 NAPAP54920 295 aa15.02■□□□□ -0
SPG7-221ENST00000569720 GRIK4Q16099 956 aa15.02■□□□□ -0
SPG7-221ENST00000569720 PTPROQ16827 1216 aa15.02■□□□□ -0
SPG7-221ENST00000569720 BMP2KLQ5H9B9 411 aa15.02■□□□□ -0
SPG7-221ENST00000569720 RPAINQ86UA6 219 aa15.02■□□□□ -0
SPG7-221ENST00000569720 AZI2Q9H6S1 392 aa15.02■□□□□ -0
SPG7-221ENST00000569720 TUBE1Q9UJT0 475 aa15.02■□□□□ -0
SPG7-221ENST00000569720 COL4A6Q14031 1691 aa15.01□□□□□ -0.01
SPG7-221ENST00000569720 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.01□□□□□ -0.01
SPG7-221ENST00000569720 RRN3P2A6NIE6 340 aa15.01□□□□□ -0.01
SPG7-221ENST00000569720 hCG_1984214I3L0E3 225 aa15.01□□□□□ -0.01
SPG7-221ENST00000569720 FOSP01100 380 aaPredicted RBP15.01□□□□□ -0.01
SPG7-221ENST00000569720 COL9A1P20849 921 aa15.01□□□□□ -0.01
SPG7-221ENST00000569720 MARK3P27448 753 aa15.01□□□□□ -0.01
SPG7-221ENST00000569720 COL9A3Q14050 684 aaPredicted RBP15.01□□□□□ -0.01
SPG7-221ENST00000569720 EPC2Q52LR7 807 aa15.01□□□□□ -0.01
SPG7-221ENST00000569720 PPP1R18Q6NYC8 613 aa15.01□□□□□ -0.01
SPG7-221ENST00000569720 APOA5Q6Q788 366 aa15.01□□□□□ -0.01
SPG7-221ENST00000569720 ZNF713Q8N859 430 aaPredicted RBP15.01□□□□□ -0.01
SPG7-221ENST00000569720 C1QTNF1Q9BXJ1 281 aa15.01□□□□□ -0.01
SPG7-221ENST00000569720 JPH1Q9HDC5 661 aaPredicted RBP15.01□□□□□ -0.01
SPG7-221ENST00000569720 CNTNAP5Q8WYK1 1306 aa15□□□□□ -0.01
SPG7-221ENST00000569720 ZBTB43O43298 467 aa15□□□□□ -0.01
SPG7-221ENST00000569720 CHRNA1P02708 482 aa15□□□□□ -0.01
SPG7-221ENST00000569720 GHRP10912 638 aa15□□□□□ -0.01
SPG7-221ENST00000569720 GPM6BQ13491 265 aa15□□□□□ -0.01
SPG7-221ENST00000569720 KRT32Q14532 448 aa15□□□□□ -0.01
SPG7-221ENST00000569720 RTN1Q16799 776 aa15□□□□□ -0.01
SPG7-221ENST00000569720 WWC2Q6AWC2 1192 aa15□□□□□ -0.01
SPG7-221ENST00000569720 RUFY4Q6ZNE9 571 aa15□□□□□ -0.01
SPG7-221ENST00000569720 DHX32Q7L7V1 743 aaKnown RBP15□□□□□ -0.01
SPG7-221ENST00000569720 TMEM192Q8IY95 271 aa15□□□□□ -0.01
SPG7-221ENST00000569720 MRPL38Q96DV4 380 aaKnown RBP15□□□□□ -0.01
SPG7-221ENST00000569720 IL17RAQ96F46 866 aa15□□□□□ -0.01
SPG7-221ENST00000569720 MXRA8Q9BRK3 442 aa15□□□□□ -0.01
SPG7-221ENST00000569720 SDF4Q9BRK5 362 aa15□□□□□ -0.01
SPG7-221ENST00000569720 OSBPL7Q9BZF2 842 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms