RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-219	ENST00000568382	FPGS	Q05932	587 aa		14	□□□□□ -0.17
SCAPER-219	ENST00000568382	HIC1	Q14526	733 aa		14	□□□□□ -0.17
SCAPER-219	ENST00000568382	SHH	Q15465	462 aa		14	□□□□□ -0.17
SCAPER-219	ENST00000568382	PTGIS	Q16647	500 aa		14	□□□□□ -0.17
SCAPER-219	ENST00000568382	NIPA1	Q7RTP0	329 aa		14	□□□□□ -0.17
SCAPER-219	ENST00000568382	BLID	Q8IZY5	108 aa		14	□□□□□ -0.17
SCAPER-219	ENST00000568382	C7orf31	Q8N865	590 aa		14	□□□□□ -0.17
SCAPER-219	ENST00000568382	DAGLB	Q8NCG7	672 aa		14	□□□□□ -0.17
SCAPER-219	ENST00000568382	CTAGE1	Q96RT6	745 aa		14	□□□□□ -0.17
SCAPER-219	ENST00000568382	PHF20	Q9BVI0	1012 aa		14	□□□□□ -0.17
SCAPER-219	ENST00000568382	TUT1	Q9H6E5	874 aa	Known RBP	14	□□□□□ -0.17
SCAPER-219	ENST00000568382	GTF2IRD1	Q9UHL9	959 aa		14	□□□□□ -0.17
SCAPER-219	ENST00000568382	TRIOBP	Q9H2D6	2365 aa		13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	CIITA	P33076	1130 aa		13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	TCF7	P36402	384 aa	Predicted RBP	13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	CCL23	P55773	120 aa		13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	HMGN5	P82970	282 aa	Known RBP	13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	ITGB3BP	Q13352	177 aa	Predicted RBP	13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	C9orf50	Q5SZB4	431 aa		13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	UTP14C	Q5TAP6	766 aa	Known RBP	13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	GALNT17	Q6IS24	598 aa		13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	C16orf59	Q7L2K0	433 aa		13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	PLA2G4D	Q86XP0	818 aa		13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	FAM177A1	Q8N128	213 aa	Predicted RBP	13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	TMEM199	Q8N511	208 aa		13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	NSUN7	Q8NE18	718 aa	Known RBP	13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	SEPT1	Q8WYJ6	367 aa		13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	TMX3	Q96JJ7	454 aa		13.99	□□□□□ -0.17
SCAPER-219	ENST00000568382	NFASC	O94856	1347 aa		13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	SOX1	O00570	391 aa	Predicted RBP	13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	JAK2	O60674	1132 aa		13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	USP11	P51784	963 aa		13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	ZNF200	P98182	395 aa	Predicted RBP	13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	LRIT3	Q3SXY7	679 aa		13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	TRIM50	Q86XT4	487 aa		13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	FAM184A	Q8NB25	1140 aa		13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	TBCK	Q8TEA7	893 aa		13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	UIMC1	Q96RL1	719 aa		13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	SDF4	Q9BRK5	362 aa		13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	WNT8A	Q9H1J5	351 aa		13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	RNPEP	Q9H4A4	650 aa		13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	JPH1	Q9HDC5	661 aa	Predicted RBP	13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	SLC9A2	Q9UBY0	812 aa		13.98	□□□□□ -0.17
SCAPER-219	ENST00000568382	DHX15	O43143	795 aa	Known RBP	13.97	□□□□□ -0.17
SCAPER-219	ENST00000568382	SMIM10L2A	P0DMW4	78 aa		13.97	□□□□□ -0.17
SCAPER-219	ENST00000568382	SMIM10L2B	P0DMW5	78 aa		13.97	□□□□□ -0.17
SCAPER-219	ENST00000568382	ACR	P10323	421 aa		13.97	□□□□□ -0.17
SCAPER-219	ENST00000568382	PPIG	Q13427	754 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
SCAPER-219	ENST00000568382	TRIM29	Q14134	588 aa		13.97	□□□□□ -0.17
SCAPER-219	ENST00000568382	PRR16	Q569H4	304 aa		13.97	□□□□□ -0.17
SCAPER-219	ENST00000568382	INTS4	Q96HW7	963 aa	Known RBP	13.97	□□□□□ -0.17
SCAPER-219	ENST00000568382	SCLY	Q96I15	445 aa		13.97	□□□□□ -0.17
SCAPER-219	ENST00000568382	SMC3	Q9UQE7	1217 aa		13.97	□□□□□ -0.17
SCAPER-219	ENST00000568382	NOD1	Q9Y239	953 aa		13.97	□□□□□ -0.17
SCAPER-219	ENST00000568382	SCN5A	Q14524	2016 aa		13.97	□□□□□ -0.17
SCAPER-219	ENST00000568382	RANBP2	P49792	3224 aa	Known RBP	13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	IPO5	O00410	1097 aa	Known RBP	13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	ATG7	O95352	703 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	CCNE2	O96020	404 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	IQCF3	P0C7M6	154 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	PDC	P20941	246 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	HOXC8	P31273	242 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	ACTR2	P61160	394 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	CCDC83	Q8IWF9	413 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	OXER1	Q8TDS5	423 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	DHX38	Q92620	1227 aa	Known RBP	13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	LENG9	Q96B70	501 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	VWCE	Q96DN2	955 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	LRCH3	Q96II8	777 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	PCYT2	Q99447	389 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	ZNF577	Q9BSK1	485 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	IL23A	Q9NPF7	189 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	KAT6A	Q92794	2004 aa		13.96	□□□□□ -0.17
SCAPER-219	ENST00000568382	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	C17orf102	A2RUQ5	167 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	DDX39A	O00148	427 aa	Known RBP	13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	LGR5	O75473	907 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	CYP3A7	P24462	503 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	SET	Q01105	290 aa	Predicted RBP	13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	PTK7	Q13308	1070 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	BFSP2	Q13515	415 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	NONO	Q15233	471 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	TMEM240	Q5SV17	173 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	ZNF365	Q70YC5	407 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	KRT25	Q7Z3Z0	450 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	RETREG2	Q8NC44	543 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	GLG1	Q92896	1179 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	WNT8B	Q93098	351 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	SMARCAD1	Q9H4L7	1026 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	TBC1D22B	Q9NU19	505 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	SETD4	Q9NVD3	440 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	ERAP1	Q9NZ08	941 aa		13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	ZNF215	Q9UL58	517 aa	Predicted RBP	13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	RBM19	Q9Y4C8	960 aa	Known RBP	13.95	□□□□□ -0.18
SCAPER-219	ENST00000568382	IGKV6D-21	A0A0A0MT36	114 aa		13.94	□□□□□ -0.18
SCAPER-219	ENST00000568382	MSH4	O15457	936 aa		13.94	□□□□□ -0.18
SCAPER-219	ENST00000568382	TREH	O43280	583 aa		13.94	□□□□□ -0.18
SCAPER-219	ENST00000568382	TDP2	O95551	362 aa		13.94	□□□□□ -0.18
SCAPER-219	ENST00000568382	MARK3	P27448	753 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms