RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 ANO3Q9BYT9 981 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 UBIAD1Q9Y5Z9 338 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 MICAL3Q7RTP6 2002 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 FIBPO43427 364 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 KPNA6O60684 536 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 CTDNEP1O95476 244 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 CA3P07451 260 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 ICAM3P32942 547 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 RFC2P35250 354 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 FXR2P51116 673 aaKnown RBP eCLIP10.86□□□□□ -0.672e-9■■■■□ 20.1
SF3B3-211ENST00000568291 MTMR1Q13613 665 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 ME3Q16798 604 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 KIAA0753Q2KHM9 967 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 GNPTABQ3T906 1256 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 NLRX1Q86UT6 975 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 EMID1Q96A84 441 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-211ENST00000568291 SLC9A7Q96T83 725 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 UHRF1Q96T88 793 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-211ENST00000568291 GPR20Q99678 358 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 C16orf70Q9BSU1 422 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 SLKQ9H2G2 1235 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-211ENST00000568291 HDAC6Q9UBN7 1215 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 KCNJ14Q9UNX9 436 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 NOD1Q9Y239 953 aa10.86□□□□□ -0.67
SF3B3-211ENST00000568291 BAZ2BQ9UIF8 2168 aaKnown RBP10.85□□□□□ -0.67
SF3B3-211ENST00000568291 FAM86B1E9PN63 330 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 DDX39AO00148 427 aaKnown RBP10.85□□□□□ -0.67
SF3B3-211ENST00000568291 NOP56O00567 594 aaKnown RBP10.85□□□□□ -0.67
SF3B3-211ENST00000568291 PPFIA4O75335 1185 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 LGALS2P05162 132 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 FAM86B2P0C5J1 330 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 TGFB3P10600 412 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 KCNA2P16389 499 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 ZNF76P36508 570 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 CLK2P49760 499 aaKnown RBP10.85□□□□□ -0.67
SF3B3-211ENST00000568291 NLRP5P59047 1200 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 ANAPC15P60006 121 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 PTPN11Q06124 597 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-211ENST00000568291 BFSP2Q13515 415 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 PTGISQ16647 500 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 PPP1R18Q6NYC8 613 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 KCNV1Q6PIU1 500 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 C7orf31Q8N865 590 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 RETREG2Q8NC44 543 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 WNT8BQ93098 351 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 GJA10Q969M2 543 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 ZBTB10Q96DT7 871 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 CTAGE1Q96RT6 745 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 MXRA8Q9BRK3 442 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 RNF26Q9BY78 433 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-211ENST00000568291 FTOQ9C0B1 505 aaKnown RBP eCLIP10.85□□□□□ -0.67
SF3B3-211ENST00000568291 ZMYND12Q9H0C1 365 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 TSPYL2Q9H2G4 693 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-211ENST00000568291 C6orf50Q9HD87 102 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 JADE2Q9NQC1 790 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 KCNH7Q9NS40 1196 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 DOCK5Q9H7D0 1870 aa10.85□□□□□ -0.67
SF3B3-211ENST00000568291 GSTTP1A0A1W2PQM5 241 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 EPOPA6NHQ4 379 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 GTPBP6O43824 516 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-211ENST00000568291 EDIL3O43854 480 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 PFKFB2O60825 505 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 STAM2O75886 525 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 IQCF3P0C7M6 154 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 MARK3P27448 753 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 ARHGAP4P98171 946 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 ITGB3BPQ13352 177 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-211ENST00000568291 NEDD9Q14511 834 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 SKIV2LQ15477 1246 aaKnown RBP10.84□□□□□ -0.67
SF3B3-211ENST00000568291 XRRA1Q6P2D8 792 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 METTL7BQ6UX53 244 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 REXO1Q8N1G1 1221 aaKnown RBP10.84□□□□□ -0.67
SF3B3-211ENST00000568291 CCDC155Q8N6L0 562 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 DHX38Q92620 1227 aaKnown RBP10.84□□□□□ -0.67
SF3B3-211ENST00000568291 GPRASP2Q96D09 838 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 KIF2CQ99661 725 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 CERS4Q9HA82 394 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 SETD4Q9NVD3 440 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 NID2Q14112 1375 aa10.84□□□□□ -0.67
SF3B3-211ENST00000568291 BDP1A6H8Y1 2624 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 H3BRB1 525 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 hCG_1984214I3L0E3 225 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 HAS3O00219 553 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 RFXAPO00287 272 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 JAK2O60674 1132 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 BAIAP3O94812 1187 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 ARHGEF15O94989 841 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 F2P00734 622 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 FOSP01100 380 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-211ENST00000568291 FDPSP14324 419 aaKnown RBP10.83□□□□□ -0.68
SF3B3-211ENST00000568291 COL9A1P20849 921 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 TCF7P36402 384 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-211ENST00000568291 SREBF1P36956 1147 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 KCNJ6P48051 423 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 ST3GAL1Q11201 340 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 CEP55Q53EZ4 464 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 TRMT1LQ7Z2T5 733 aaKnown RBP10.83□□□□□ -0.68
SF3B3-211ENST00000568291 PLA2G4DQ86XP0 818 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 HERC6Q8IVU3 1022 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 TRIM22Q8IYM9 498 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms