RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 SYT3Q9BQG1 590 aa6.41□□□□□ -1.38
CHD9-215ENST00000565442 MRPL4Q9BYD3 311 aaKnown RBP6.41□□□□□ -1.38
CHD9-215ENST00000565442 CD248Q9HCU0 757 aa6.41□□□□□ -1.38
CHD9-215ENST00000565442 PPP4R1LQ9P1A2 415 aa6.41□□□□□ -1.38
CHD9-215ENST00000565442 ASXL2Q76L83 1435 aa6.41□□□□□ -1.38
CHD9-215ENST00000565442 PPP1R11O60927 126 aaPredicted RBP6.4□□□□□ -1.38
CHD9-215ENST00000565442 LCP1P13796 627 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 KLF10Q13118 480 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 FNDC3BQ53EP0 1204 aaKnown RBP6.4□□□□□ -1.38
CHD9-215ENST00000565442 TAF7LQ5H9L4 462 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 MBLAC2Q68D91 279 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 ETV3LQ6ZN32 361 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 TTLL6Q8N841 843 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 DCAF4Q8WV16 495 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 DIO2Q92813 273 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 NINJ1Q92982 152 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 LCORQ96JN0 433 aaPredicted RBP6.4□□□□□ -1.38
CHD9-215ENST00000565442 PHF20Q9BVI0 1012 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 GULP1Q9UBP9 304 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 PLAAQ9Y263 795 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 HS3ST3A1Q9Y663 406 aa6.4□□□□□ -1.38
CHD9-215ENST00000565442 B4GALT3O60512 393 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 RFPL3O75679 317 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 SDSP20132 328 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 LTBRP36941 435 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 INF2Q27J81 1249 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 TRIM61Q5EBN2 209 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 PRR31Q5SQ13 230 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 ACBD5Q5T8D3 534 aaPredicted RBP6.39□□□□□ -1.39
CHD9-215ENST00000565442 RNF187Q5TA31 235 aaPredicted RBP6.39□□□□□ -1.39
CHD9-215ENST00000565442 STYK1Q6J9G0 422 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 MAMDC2Q7Z304 686 aaPredicted RBP6.39□□□□□ -1.39
CHD9-215ENST00000565442 BRAPQ7Z569 592 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 FGD2Q7Z6J4 655 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 PLEKHH3Q7Z736 793 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 FILIP1Q7Z7B0 1213 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 PALM2Q8IXS6 379 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 USP33Q8TEY7 942 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 MFSD3Q96ES6 412 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 MMP19Q99542 508 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 SIT1Q9Y3P8 196 aa6.39□□□□□ -1.39
CHD9-215ENST00000565442 TRBV23OR9-2A0A075B6M9 112 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.38□□□□□ -1.39
CHD9-215ENST00000565442 NPEPPSL1A6NEC2 478 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 DDX3XO00571 662 aaKnown RBP eCLIP6.38□□□□□ -1.39
CHD9-215ENST00000565442 MSCO60682 206 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 E4F1Q66K89 784 aaPredicted RBP6.38□□□□□ -1.39
CHD9-215ENST00000565442 IQCEQ6IPM2 695 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 ZNF585AQ6P3V2 769 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 RCBTB1Q8NDN9 531 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 GSTCDQ8NEC7 633 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 DNERQ8NFT8 737 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 TRIM39Q9HCM9 518 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 IFT57Q9NWB7 429 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 PCDHA9Q9Y5H5 950 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 PCDHA2Q9Y5H9 948 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 NPFFR2Q9Y5X5 522 aa6.38□□□□□ -1.39
CHD9-215ENST00000565442 C7orf72A4D263 438 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 C9orf118A6NHY6 69 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 GPR42O15529 346 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 KCNQ2O43526 872 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 EFCAB14O75071 495 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 DNAJC8O75937 253 aaPredicted RBP6.37□□□□□ -1.39
CHD9-215ENST00000565442 RASGRP1O95267 797 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 CRTAMO95727 393 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 NTRK1P04629 796 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 MYCLP1P12525 358 aaPredicted RBP6.37□□□□□ -1.39
CHD9-215ENST00000565442 NCLP19338 710 aaKnown RBP6.37□□□□□ -1.39
CHD9-215ENST00000565442 MASP1P48740 699 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 ITGA1P56199 1179 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 KCNAB2Q13303 367 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 TM4SF20Q53R12 229 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 CD300LDQ6UXZ3 194 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 STK32CQ86UX6 486 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 CIR1Q86X95 450 aaPredicted RBP6.37□□□□□ -1.39
CHD9-215ENST00000565442 FAM26EQ8N5C1 309 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 SCLYQ96I15 445 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 MAGEB10Q96LZ2 347 aaPredicted RBP6.37□□□□□ -1.39
CHD9-215ENST00000565442 DEF6Q9H4E7 631 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 GPR27Q9NS67 375 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.37□□□□□ -1.39
CHD9-215ENST00000565442 ING1Q9UK53 422 aaPredicted RBP6.37□□□□□ -1.39
CHD9-215ENST00000565442 PRKAB1Q9Y478 270 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 PCDHA8Q9Y5H6 950 aa6.37□□□□□ -1.39
CHD9-215ENST00000565442 AQP7O14520 342 aa6.36□□□□□ -1.39
CHD9-215ENST00000565442 DNAJC6O75061 913 aa6.36□□□□□ -1.39
CHD9-215ENST00000565442 GPR85P60893 370 aa6.36□□□□□ -1.39
CHD9-215ENST00000565442 GUCY1A3Q02108 690 aa6.36□□□□□ -1.39
CHD9-215ENST00000565442 TESK1Q15569 626 aa6.36□□□□□ -1.39
CHD9-215ENST00000565442 CNNM4Q6P4Q7 775 aa6.36□□□□□ -1.39
CHD9-215ENST00000565442 RSPO2Q6UXX9 243 aaPredicted RBP6.36□□□□□ -1.39
CHD9-215ENST00000565442 MTDHQ86UE4 582 aaKnown RBP6.36□□□□□ -1.39
CHD9-215ENST00000565442 ZC3H18Q86VM9 953 aaKnown RBP6.36□□□□□ -1.39
CHD9-215ENST00000565442 MIB1Q86YT6 1006 aa6.36□□□□□ -1.39
CHD9-215ENST00000565442 DCP2Q8IU60 420 aaKnown RBP6.36□□□□□ -1.39
CHD9-215ENST00000565442 IFNL3Q8IZI9 196 aa6.36□□□□□ -1.39
CHD9-215ENST00000565442 CHAMP1Q96JM3 812 aa6.36□□□□□ -1.39
CHD9-215ENST00000565442 SPC25Q9HBM1 224 aa6.36□□□□□ -1.39
CHD9-215ENST00000565442 BTG4Q9NY30 223 aa6.36□□□□□ -1.39
CHD9-215ENST00000565442 SELENOPP49908 381 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms