RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 IPO5O00410 1097 aaKnown RBP23.04■■□□□ 1.28
CMTM3-206ENST00000563672 CYP3A7P24462 503 aa23.04■■□□□ 1.28
CMTM3-206ENST00000563672 HOXC8P31273 242 aa23.04■■□□□ 1.28
CMTM3-206ENST00000563672 HIC1Q14526 733 aa23.04■■□□□ 1.28
CMTM3-206ENST00000563672 NONOQ15233 471 aaKnown RBP eCLIP23.04■■□□□ 1.28
CMTM3-206ENST00000563672 TMEM199Q8N511 208 aa23.04■■□□□ 1.28
CMTM3-206ENST00000563672 ZNF577Q9BSK1 485 aa23.04■■□□□ 1.28
CMTM3-206ENST00000563672 WNT8AQ9H1J5 351 aa23.04■■□□□ 1.28
CMTM3-206ENST00000563672 ZNF215Q9UL58 517 aaPredicted RBP23.04■■□□□ 1.28
CMTM3-206ENST00000563672 DOCK5Q9H7D0 1870 aa23.04■■□□□ 1.28
CMTM3-206ENST00000563672 LGR5O75473 907 aa23.03■■□□□ 1.28
CMTM3-206ENST00000563672 ATG7O95352 703 aa23.03■■□□□ 1.28
CMTM3-206ENST00000563672 CSF2RAP15509 400 aa23.03■■□□□ 1.28
CMTM3-206ENST00000563672 ACTR2P61160 394 aa23.03■■□□□ 1.28
CMTM3-206ENST00000563672 PCYT2Q99447 389 aa23.03■■□□□ 1.28
CMTM3-206ENST00000563672 TBC1D22BQ9NU19 505 aa23.03■■□□□ 1.28
CMTM3-206ENST00000563672 NOD1Q9Y239 953 aa23.03■■□□□ 1.28
CMTM3-206ENST00000563672 LAMA3Q16787 3333 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 CCNE2O96020 404 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 SMIM10L2AP0DMW4 78 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 SMIM10L2BP0DMW5 78 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 CCL23P55773 120 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 ZNF200P98182 395 aaPredicted RBP23.02■■□□□ 1.28
CMTM3-206ENST00000563672 PPIGQ13427 754 aaKnown RBP eCLIP23.02■■□□□ 1.28
CMTM3-206ENST00000563672 SHHQ15465 462 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 Q4G0T1 1027 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 C9orf50Q5SZB4 431 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 MOXD1Q6UVY6 613 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 MBOAT7Q96N66 472 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 RNPEPQ9H4A4 650 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 SMARCAD1Q9H4L7 1026 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 EMSYQ7Z589 1322 aa23.02■■□□□ 1.28
CMTM3-206ENST00000563672 CCDC194A0A1B0GVG4 234 aa23.01■■□□□ 1.27
CMTM3-206ENST00000563672 PITPNM1O00562 1244 aa23.01■■□□□ 1.27
CMTM3-206ENST00000563672 MSH4O15457 936 aa23.01■■□□□ 1.27
CMTM3-206ENST00000563672 CD2BP2O95400 341 aaKnown RBP23.01■■□□□ 1.27
CMTM3-206ENST00000563672 FXR1P51114 621 aaKnown RBP eCLIP23.01■■□□□ 1.27
CMTM3-206ENST00000563672 INF2Q27J81 1249 aa23.01■■□□□ 1.27
CMTM3-206ENST00000563672 LRIT3Q3SXY7 679 aa23.01■■□□□ 1.27
CMTM3-206ENST00000563672 C16orf59Q7L2K0 433 aa23.01■■□□□ 1.27
CMTM3-206ENST00000563672 DHX38Q92620 1227 aaKnown RBP23.01■■□□□ 1.27
CMTM3-206ENST00000563672 TNFRSF25Q93038 417 aa23.01■■□□□ 1.27
CMTM3-206ENST00000563672 UIMC1Q96RL1 719 aa23.01■■□□□ 1.27
CMTM3-206ENST00000563672 ERAP1Q9NZ08 941 aa23.01■■□□□ 1.27
CMTM3-206ENST00000563672 IGKV6D-21A0A0A0MT36 114 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 C17orf102A2RUQ5 167 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 DDX39AO00148 427 aaKnown RBP23■■□□□ 1.27
CMTM3-206ENST00000563672 TDP2O95551 362 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 MMP1P03956 469 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 KRT2P35908 639 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 HMGN5P82970 282 aaKnown RBP23■■□□□ 1.27
CMTM3-206ENST00000563672 RBL2Q08999 1139 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 NR5A1Q13285 461 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 PTK7Q13308 1070 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 BFSP2Q13515 415 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 KRT40Q6A162 431 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 ABHD15Q6UXT9 468 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 CAGE1Q8TC20 777 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 GLG1Q92896 1179 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 BRMS1Q9HCU9 246 aa23■■□□□ 1.27
CMTM3-206ENST00000563672 ADAM17P78536 824 aa22.99■■□□□ 1.27
CMTM3-206ENST00000563672 TRIM29Q14134 588 aa22.99■■□□□ 1.27
CMTM3-206ENST00000563672 EARS2Q5JPH6 523 aaKnown RBP22.99■■□□□ 1.27
CMTM3-206ENST00000563672 ZNF746Q6NUN9 644 aaPredicted RBP22.99■■□□□ 1.27
CMTM3-206ENST00000563672 PIK3AP1Q6ZUJ8 805 aa22.99■■□□□ 1.27
CMTM3-206ENST00000563672 PLPPR4Q7Z2D5 763 aa22.99■■□□□ 1.27
CMTM3-206ENST00000563672 SLC5A5Q92911 643 aa22.99■■□□□ 1.27
CMTM3-206ENST00000563672 VWCEQ96DN2 955 aa22.99■■□□□ 1.27
CMTM3-206ENST00000563672 SCLYQ96I15 445 aa22.99■■□□□ 1.27
CMTM3-206ENST00000563672 TMX3Q96JJ7 454 aa22.99■■□□□ 1.27
CMTM3-206ENST00000563672 RIT2Q99578 217 aa22.99■■□□□ 1.27
CMTM3-206ENST00000563672 IL23AQ9NPF7 189 aa22.99■■□□□ 1.27
CMTM3-206ENST00000563672 SETD4Q9NVD3 440 aa22.99■■□□□ 1.27
CMTM3-206ENST00000563672 MCM2P49736 904 aa22.98■■□□□ 1.27
CMTM3-206ENST00000563672 TRIM71Q2Q1W2 868 aaKnown RBP22.98■■□□□ 1.27
CMTM3-206ENST00000563672 TMEM240Q5SV17 173 aa22.98■■□□□ 1.27
CMTM3-206ENST00000563672 NEK8Q86SG6 692 aa22.98■■□□□ 1.27
CMTM3-206ENST00000563672 SERINC5Q86VE9 423 aa22.98■■□□□ 1.27
CMTM3-206ENST00000563672 DIS3L2Q8IYB7 885 aaKnown RBP22.98■■□□□ 1.27
CMTM3-206ENST00000563672 CCDC155Q8N6L0 562 aa22.98■■□□□ 1.27
CMTM3-206ENST00000563672 RETREG2Q8NC44 543 aa22.98■■□□□ 1.27
CMTM3-206ENST00000563672 WNT8BQ93098 351 aa22.98■■□□□ 1.27
CMTM3-206ENST00000563672 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.98■■□□□ 1.273e-6■■■□□ 17
CMTM3-206ENST00000563672 AZI2Q9H6S1 392 aa22.98■■□□□ 1.27
CMTM3-206ENST00000563672 NRCAMQ92823 1304 aa22.98■■□□□ 1.27
CMTM3-206ENST00000563672 BTBD18B2RXH4 712 aa22.97■■□□□ 1.27
CMTM3-206ENST00000563672 TREHO43280 583 aa22.97■■□□□ 1.27
CMTM3-206ENST00000563672 IQCF3P0C7M6 154 aa22.97■■□□□ 1.27
CMTM3-206ENST00000563672 GNAT1P11488 350 aa22.97■■□□□ 1.27
CMTM3-206ENST00000563672 MARK3P27448 753 aa22.97■■□□□ 1.27
CMTM3-206ENST00000563672 STAT5BP51692 787 aa22.97■■□□□ 1.27
CMTM3-206ENST00000563672 FOSBP53539 338 aa22.97■■□□□ 1.27
CMTM3-206ENST00000563672 KRT76Q01546 638 aa22.97■■□□□ 1.27
CMTM3-206ENST00000563672 LETM2Q2VYF4 491 aa22.97■■□□□ 1.27
CMTM3-206ENST00000563672 PPP4R3AQ6IN85 833 aa22.97■■□□□ 1.27
CMTM3-206ENST00000563672 AFAP1L1Q8TED9 768 aa22.97■■□□□ 1.27
CMTM3-206ENST00000563672 ATP6V0A1Q93050 837 aa22.97■■□□□ 1.27
CMTM3-206ENST00000563672 FAM205CA6NFA0 338 aa22.96■■□□□ 1.27
CMTM3-206ENST00000563672 SOX1O00570 391 aaPredicted RBP22.96■■□□□ 1.27
CMTM3-206ENST00000563672 ACRP10323 421 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms