RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 RPS8P62241 208 aaKnown RBP13.92□□□□□ -0.18
CCDC187-201ENST00000563590 TROAPQ12815 778 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 NBPF9Q3BBW0 867 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 CCDC38Q502W7 563 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 LRRC47Q8N1G4 583 aaKnown RBP13.92□□□□□ -0.18
CCDC187-201ENST00000563590 ARHGEF1Q92888 912 aaKnown RBP13.92□□□□□ -0.18
CCDC187-201ENST00000563590 PNMA2Q9UL42 364 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 SPATA31A6Q5VVP1 1343 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 CNTNAP5Q8WYK1 1306 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 ERVV-1B6SEH8 477 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 EPHB6O15197 1021 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 ANP32DO95626 131 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 PDHA1P08559 390 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 HSD17B3P37058 310 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 KLHL30Q0D2K2 578 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 LRRC14Q15048 493 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 USP17L2Q6R6M4 530 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 OTUD6AQ7L8S5 288 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 MTA3Q9BTC8 594 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 AMACRQ9UHK6 382 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 SALL4Q9UJQ4 1053 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 PNPLA7Q6ZV29 1317 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 LONP1P36776 959 aaKnown RBP13.91□□□□□ -0.18
CCDC187-201ENST00000563590 DDR1Q08345 913 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 STK4Q13043 487 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
CCDC187-201ENST00000563590 MYH6P13533 1939 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 PARP4Q9UKK3 1724 aaKnown RBP13.91□□□□□ -0.18
CCDC187-201ENST00000563590 MMEP08473 750 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 TECP42680 631 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 CACNB3P54284 484 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 SNAP25P60880 206 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 CAVIN3Q969G5 261 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 NDST4Q9H3R1 872 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 RBM28Q9NW13 759 aaKnown RBP13.91□□□□□ -0.18
CCDC187-201ENST00000563590 DISP2A7MBM2 1401 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 DCDC2CA8MYV0 355 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 CCNT1O60563 726 aaKnown RBP13.91□□□□□ -0.18
CCDC187-201ENST00000563590 SCG2P13521 617 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 CNBD1Q8NA66 436 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 RETREG2Q8NC44 543 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 GIMAP8Q8ND71 665 aaPredicted RBP13.91□□□□□ -0.18
CCDC187-201ENST00000563590 WHAMMQ8TF30 809 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 LRRC15Q8TF66 581 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 PRCCQ92733 491 aaPredicted RBP13.91□□□□□ -0.18
CCDC187-201ENST00000563590 KLHL29Q96CT2 875 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 LSM14BQ9BX40 385 aaKnown RBP13.91□□□□□ -0.18
CCDC187-201ENST00000563590 TLR10Q9BXR5 811 aa13.91□□□□□ -0.18
CCDC187-201ENST00000563590 FAM205AQ6ZU69 1335 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 CHD4Q14839 1912 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 SESN3P58005 492 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 TBC1D10BQ4KMP7 808 aaPredicted RBP13.9□□□□□ -0.18
CCDC187-201ENST00000563590 MIIPQ5JXC2 388 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 SFMBT2Q5VUG0 894 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 CABP7Q86V35 215 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 FAM133AQ8N9E0 248 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 CUL5Q93034 780 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 CELF4Q9BZC1 486 aaKnown RBP13.9□□□□□ -0.18
CCDC187-201ENST00000563590 TMEM60Q9H2L4 133 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 IRAK4Q9NWZ3 460 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 MYH10P35580 1976 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 SMIM24O75264 130 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 CAMTA2O94983 1202 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 LDHBP07195 334 aaKnown RBP13.9□□□□□ -0.18
CCDC187-201ENST00000563590 PLCG1P19174 1290 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 MECOMQ03112 1051 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 ITIH3Q06033 890 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 ZNF572Q7Z3I7 529 aaPredicted RBP13.9□□□□□ -0.18
CCDC187-201ENST00000563590 C4orf32Q8N8J7 132 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 PARD3BQ8TEW8 1205 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 INTS9Q9NV88 658 aaKnown RBP13.9□□□□□ -0.18
CCDC187-201ENST00000563590 PKD2L1Q9P0L9 805 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
CCDC187-201ENST00000563590 TMEM110-MUSTN1A8MSY1 372 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 H0Y3Z8 333 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 EVI5O60447 810 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 RHOBTB3O94955 611 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 ATP6V1G2O95670 118 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 KIF5BP33176 963 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 COPB2P35606 906 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 TRAPPC10P48553 1259 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 DOK7Q18PE1 504 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
CCDC187-201ENST00000563590 TAF1DQ9H5J8 278 aaPredicted RBP13.9□□□□□ -0.18
CCDC187-201ENST00000563590 SWAP70Q9UH65 585 aa13.9□□□□□ -0.18
CCDC187-201ENST00000563590 MROH5Q6ZUA9 1318 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 TIAM2Q8IVF5 1701 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 RASSF9O75901 435 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 UFL1O94874 794 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 SLC16A2P36021 539 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 PLS1Q14651 629 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 ARMC3Q5W041 872 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 LMBR1Q8WVP7 490 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 CALML4Q96GE6 196 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 TSG101Q99816 390 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
CCDC187-201ENST00000563590 SEC63Q9UGP8 760 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms