RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ESYT1Q9BSJ8 1104 aa15.57■□□□□ 0.08
SMAD3-214ENST00000560402 RNPEPQ9H4A4 650 aa15.57■□□□□ 0.08
SMAD3-214ENST00000560402 ADAM17P78536 824 aa15.56■□□□□ 0.08
SMAD3-214ENST00000560402 HTRA4P83105 476 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-214ENST00000560402 TMCO2Q7Z6W1 182 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-214ENST00000560402 SGMS1Q86VZ5 419 aa15.56■□□□□ 0.08
SMAD3-214ENST00000560402 TRIM50Q86XT4 487 aa15.56■□□□□ 0.08
SMAD3-214ENST00000560402 MYOCDQ8IZQ8 938 aa15.56■□□□□ 0.08
SMAD3-214ENST00000560402 SRBD1Q8N5C6 995 aaKnown RBP15.56■□□□□ 0.08
SMAD3-214ENST00000560402 SP7Q8TDD2 431 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-214ENST00000560402 HLA-CQ95604 372 aa15.56■□□□□ 0.08
SMAD3-214ENST00000560402 PSTPIP2Q9H939 334 aa15.56■□□□□ 0.08
SMAD3-214ENST00000560402 EHMT1Q9H9B1 1298 aa15.56■□□□□ 0.08
SMAD3-214ENST00000560402 RTEL1Q9NZ71 1219 aa15.56■□□□□ 0.08
SMAD3-214ENST00000560402 SLC12A7Q9Y666 1083 aa15.56■□□□□ 0.08
SMAD3-214ENST00000560402 NRCAMQ92823 1304 aa15.56■□□□□ 0.08
SMAD3-214ENST00000560402 BRWD1Q9NSI6 2320 aa15.55■□□□□ 0.08
SMAD3-214ENST00000560402 SPDYE3A6NKU9 549 aa15.55■□□□□ 0.08
SMAD3-214ENST00000560402 RPLP2P05387 115 aaKnown RBP15.55■□□□□ 0.08
SMAD3-214ENST00000560402 RBM25P49756 843 aaKnown RBP15.55■□□□□ 0.08
SMAD3-214ENST00000560402 TFF2Q03403 129 aa15.55■□□□□ 0.08
SMAD3-214ENST00000560402 FAM26DQ5JW98 314 aa15.55■□□□□ 0.08
SMAD3-214ENST00000560402 RNF20Q5VTR2 975 aa15.55■□□□□ 0.08
SMAD3-214ENST00000560402 CREB3L3Q68CJ9 461 aa15.55■□□□□ 0.08
SMAD3-214ENST00000560402 KRT40Q6A162 431 aa15.55■□□□□ 0.08
SMAD3-214ENST00000560402 TAF2Q6P1X5 1199 aa15.55■□□□□ 0.08
SMAD3-214ENST00000560402 TMTC3Q6ZXV5 915 aa15.55■□□□□ 0.08
SMAD3-214ENST00000560402 SPRED2Q7Z698 418 aa15.55■□□□□ 0.08
SMAD3-214ENST00000560402 RPAINQ86UA6 219 aa15.55■□□□□ 0.08
SMAD3-214ENST00000560402 LMBR1Q8WVP7 490 aa15.55■□□□□ 0.08
SMAD3-214ENST00000560402 MAFGO15525 162 aa15.54■□□□□ 0.08
SMAD3-214ENST00000560402 CTSHP09668 335 aa15.54■□□□□ 0.08
SMAD3-214ENST00000560402 KCNA2P16389 499 aa15.54■□□□□ 0.08
SMAD3-214ENST00000560402 TCF7P36402 384 aaPredicted RBP15.54■□□□□ 0.08
SMAD3-214ENST00000560402 ARHGAP4P98171 946 aa15.54■□□□□ 0.08
SMAD3-214ENST00000560402 NECTIN1Q15223 517 aa15.54■□□□□ 0.08
SMAD3-214ENST00000560402 UTP14CQ5TAP6 766 aaKnown RBP15.54■□□□□ 0.08
SMAD3-214ENST00000560402 PPP1R18Q6NYC8 613 aa15.54■□□□□ 0.08
SMAD3-214ENST00000560402 SYNE3Q6ZMZ3 975 aa15.54■□□□□ 0.08
SMAD3-214ENST00000560402 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.54■□□□□ 0.08
SMAD3-214ENST00000560402 FBXO22Q8NEZ5 403 aa15.54■□□□□ 0.08
SMAD3-214ENST00000560402 BCAS3Q9H6U6 928 aa15.54■□□□□ 0.08
SMAD3-214ENST00000560402 SUGCTQ9HAC7 445 aa15.54■□□□□ 0.08
SMAD3-214ENST00000560402 ANO2Q9NQ90 1003 aa15.54■□□□□ 0.08
SMAD3-214ENST00000560402 SETD4Q9NVD3 440 aa15.54■□□□□ 0.08
SMAD3-214ENST00000560402 RBM28Q9NW13 759 aaKnown RBP15.54■□□□□ 0.08
SMAD3-214ENST00000560402 hCG_1984214I3L0E3 225 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 RXRAP19793 462 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 KCNQ1P51787 676 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 SP4Q02446 784 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 MTMR1Q13613 665 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 FAM117BQ6P1L5 589 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 RSPH3Q86UC2 560 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 MICU3Q86XE3 530 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 ZNF713Q8N859 430 aaPredicted RBP15.53■□□□□ 0.08
SMAD3-214ENST00000560402 SEPT1Q8WYJ6 367 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 YME1L1Q96TA2 773 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 IFIH1Q9BYX4 1025 aaKnown RBP15.53■□□□□ 0.08
SMAD3-214ENST00000560402 ERAP1Q9NZ08 941 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 MTUS1Q9ULD2 1270 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 UBIAD1Q9Y5Z9 338 aa15.53■□□□□ 0.08
SMAD3-214ENST00000560402 CNTNAP5Q8WYK1 1306 aa15.52■□□□□ 0.08
SMAD3-214ENST00000560402 ITGB5P18084 799 aa15.52■□□□□ 0.08
SMAD3-214ENST00000560402 PPFIA1Q13136 1202 aa15.52■□□□□ 0.08
SMAD3-214ENST00000560402 PTPROQ16827 1216 aa15.52■□□□□ 0.08
SMAD3-214ENST00000560402 TIGD5Q53EQ6 642 aa15.52■□□□□ 0.08
SMAD3-214ENST00000560402 APOA5Q6Q788 366 aa15.52■□□□□ 0.08
SMAD3-214ENST00000560402 FANCBQ8NB91 859 aa15.52■□□□□ 0.08
SMAD3-214ENST00000560402 TOP1MTQ969P6 601 aa15.52■□□□□ 0.08
SMAD3-214ENST00000560402 UBE2SQ16763 222 aa15.51■□□□□ 0.07
SMAD3-214ENST00000560402 HEATR3Q7Z4Q2 680 aa15.51■□□□□ 0.07
SMAD3-214ENST00000560402 HSCBQ8IWL3 235 aa15.51■□□□□ 0.07
SMAD3-214ENST00000560402 CMTR1Q8N1G2 835 aaKnown RBP15.51■□□□□ 0.07
SMAD3-214ENST00000560402 TNPO1Q92973 898 aaKnown RBP15.51■□□□□ 0.07
SMAD3-214ENST00000560402 MRPL38Q96DV4 380 aaKnown RBP15.51■□□□□ 0.07
SMAD3-214ENST00000560402 C17orf80Q9BSJ5 609 aa15.51■□□□□ 0.07
SMAD3-214ENST00000560402 C1QTNF1Q9BXJ1 281 aa15.51■□□□□ 0.07
SMAD3-214ENST00000560402 SMARCAD1Q9H4L7 1026 aa15.51■□□□□ 0.07
SMAD3-214ENST00000560402 JADE2Q9NQC1 790 aa15.51■□□□□ 0.07
SMAD3-214ENST00000560402 TUBE1Q9UJT0 475 aa15.51■□□□□ 0.07
SMAD3-214ENST00000560402 PCDHA6Q9UN73 950 aa15.51■□□□□ 0.07
SMAD3-214ENST00000560402 PCDHA8Q9Y5H6 950 aa15.51■□□□□ 0.07
SMAD3-214ENST00000560402 ATG2AQ2TAZ0 1938 aa15.51■□□□□ 0.07
SMAD3-214ENST00000560402 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.5■□□□□ 0.07
SMAD3-214ENST00000560402 MBLAC1A4D2B0 266 aaPredicted RBP15.5■□□□□ 0.07
SMAD3-214ENST00000560402 ATP9AO75110 1047 aa15.5■□□□□ 0.07
SMAD3-214ENST00000560402 FOSP01100 380 aaPredicted RBP15.5■□□□□ 0.07
SMAD3-214ENST00000560402 COL9A1P20849 921 aa15.5■□□□□ 0.07
SMAD3-214ENST00000560402 RCAN1P53805 252 aa15.5■□□□□ 0.07
SMAD3-214ENST00000560402 MGAT3Q09327 533 aa15.5■□□□□ 0.07
SMAD3-214ENST00000560402 GRIK4Q16099 956 aa15.5■□□□□ 0.07
SMAD3-214ENST00000560402 GLG1Q92896 1179 aa15.5■□□□□ 0.07
SMAD3-214ENST00000560402 NECAB3Q96P71 396 aaPredicted RBP15.5■□□□□ 0.07
SMAD3-214ENST00000560402 NEK1Q96PY6 1258 aa15.5■□□□□ 0.07
SMAD3-214ENST00000560402 GLT8D2Q9H1C3 349 aa15.5■□□□□ 0.07
SMAD3-214ENST00000560402 UBE2ZQ9H832 354 aaPredicted RBP15.5■□□□□ 0.07
SMAD3-214ENST00000560402 JPH1Q9HDC5 661 aaPredicted RBP15.5■□□□□ 0.07
SMAD3-214ENST00000560402 RWDD3Q9Y3V2 267 aa15.5■□□□□ 0.07
SMAD3-214ENST00000560402 NFASCO94856 1347 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 GSTTP1A0A1W2PQM5 241 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms