RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 UBE2SQ16763 222 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 TRIM71Q2Q1W2 868 aaKnown RBP10.39□□□□□ -0.75
IDH3A-217ENST00000559889 GNPTABQ3T906 1256 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 XRRA1Q6P2D8 792 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 METTL7BQ6UX53 244 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 CAGE1Q8TC20 777 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 CUL5Q93034 780 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 GTF3C6Q969F1 213 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 MTIF3Q9H2K0 278 aaKnown RBP10.39□□□□□ -0.75
IDH3A-217ENST00000559889 TCHHQ07283 1943 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 SCN5AQ14524 2016 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 ZBTB43O43298 467 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 GADD45BO75293 160 aaPredicted RBP10.39□□□□□ -0.75
IDH3A-217ENST00000559889 ITGB5P18084 799 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 PDCP20941 246 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 HOXC8P31273 242 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 MRE11P49959 708 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 ZSCAN23Q3MJ62 389 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 WWC2Q6AWC2 1192 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 TRAF7Q6Q0C0 670 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 SYNE3Q6ZMZ3 975 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 CYFIP1Q7L576 1253 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 RETREG2Q8NC44 543 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 AFAP1L1Q8TED9 768 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 GPR20Q99678 358 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 SENP7Q9BQF6 1050 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 RBM28Q9NW13 759 aaKnown RBP10.39□□□□□ -0.75
IDH3A-217ENST00000559889 SLC4A7Q9Y6M7 1214 aa10.39□□□□□ -0.75
IDH3A-217ENST00000559889 MBD3O95983 291 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 LGALS2P05162 132 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 CKBP12277 381 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 CDC27P30260 824 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 RABGGTBP53611 331 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 DNM1Q05193 864 aaKnown RBP10.38□□□□□ -0.75
IDH3A-217ENST00000559889 SCRN1Q12765 414 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 NEDD9Q14511 834 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 RTN1Q16799 776 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 HEATR3Q7Z4Q2 680 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 FAM184AQ8NB25 1140 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 TANC1Q9C0D5 1861 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 KLF18A0A0U1RQI7 1052 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 H3BRB1 525 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 ATP9AO75110 1047 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 MYOGP15173 224 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 SELPP16109 830 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 PTK7Q13308 1070 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 RAB30Q15771 203 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 LRRC8DQ7L1W4 858 aa10.38□□□□□ -0.75
IDH3A-217ENST00000559889 MAFAQ8NHW3 353 aaPredicted RBP10.38□□□□□ -0.75
IDH3A-217ENST00000559889 TUT1Q9H6E5 874 aaKnown RBP10.38□□□□□ -0.75
IDH3A-217ENST00000559889 NCOA5Q9HCD5 579 aaKnown RBP10.38□□□□□ -0.75
IDH3A-217ENST00000559889 V9GY48 417 aaPredicted RBP10.38□□□□□ -0.75
IDH3A-217ENST00000559889 MYH7BA7E2Y1 1941 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 ZBBXA8MT70 800 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 NBNO60934 754 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 FOSL2P15408 326 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 KCNA2P16389 499 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 ATP2A2P16615 1042 aaKnown RBP10.37□□□□□ -0.75
IDH3A-217ENST00000559889 FOSBP53539 338 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 RCAN1P53805 252 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 MBTPS1Q14703 1052 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 TCTN1Q2MV58 587 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 FAM173BQ6P4H8 233 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 SERINC5Q86VE9 423 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 CCDC155Q8N6L0 562 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 NKX2-4Q9H2Z4 354 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 TMEM63CQ9P1W3 806 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 PCDHA6Q9UN73 950 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 PCDHA8Q9Y5H6 950 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 UBIAD1Q9Y5Z9 338 aa10.37□□□□□ -0.75
IDH3A-217ENST00000559889 SYCE3A1L190 88 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 GOLGA8AA7E2F4 631 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 GOLGA8BA8MQT2 603 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 H3BQV1 296 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 NOP56O00567 594 aaKnown RBP10.36□□□□□ -0.75
IDH3A-217ENST00000559889 CXCL10P02778 98 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 ADD1P35611 737 aaKnown RBP10.36□□□□□ -0.75
IDH3A-217ENST00000559889 TRIM50Q86XT4 487 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 FBXL16Q8N461 479 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 GPRASP2Q96D09 838 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 AGXT2Q9BYV1 514 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 MSRAQ9UJ68 235 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 TET1Q8NFU7 2136 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 STXBP3O00186 592 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 SMIM10L2AP0DMW4 78 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 SMIM10L2BP0DMW5 78 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 ZNF618Q5T7W0 954 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 POTEHQ6S545 545 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 NLRX1Q86UT6 975 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.36□□□□□ -0.75
IDH3A-217ENST00000559889 FTOQ9C0B1 505 aaKnown RBP eCLIP10.36□□□□□ -0.75
IDH3A-217ENST00000559889 RNPEPQ9H4A4 650 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 PRDM12Q9H4Q4 367 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 RIC8AQ9NPQ8 531 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 BARHL2Q9NY43 387 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 PCDHA11Q9Y5I1 949 aa10.36□□□□□ -0.75
IDH3A-217ENST00000559889 SPDYE3A6NKU9 549 aa10.35□□□□□ -0.75
IDH3A-217ENST00000559889 ACTN1P12814 892 aa10.35□□□□□ -0.75
IDH3A-217ENST00000559889 ADGRE1Q14246 886 aa10.35□□□□□ -0.75
IDH3A-217ENST00000559889 PPP1R18Q6NYC8 613 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms