RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ADAM17P78536 824 aa21.63■■□□□ 1.05
CDKN3-209ENST00000556102 HTRA4P83105 476 aaPredicted RBP21.63■■□□□ 1.05
CDKN3-209ENST00000556102 LMBR1Q8WVP7 490 aa21.63■■□□□ 1.05
CDKN3-209ENST00000556102 NECAB3Q96P71 396 aaPredicted RBP21.63■■□□□ 1.05
CDKN3-209ENST00000556102 SLC12A7Q9Y666 1083 aa21.63■■□□□ 1.05
CDKN3-209ENST00000556102 KCNA2P16389 499 aa21.62■■□□□ 1.05
CDKN3-209ENST00000556102 TCF7P36402 384 aaPredicted RBP21.62■■□□□ 1.05
CDKN3-209ENST00000556102 ARHGAP4P98171 946 aa21.62■■□□□ 1.05
CDKN3-209ENST00000556102 TMTC3Q6ZXV5 915 aa21.62■■□□□ 1.05
CDKN3-209ENST00000556102 SGMS1Q86VZ5 419 aa21.62■■□□□ 1.05
CDKN3-209ENST00000556102 RAB11FIP4Q86YS3 637 aa21.62■■□□□ 1.05
CDKN3-209ENST00000556102 SP7Q8TDD2 431 aaPredicted RBP21.62■■□□□ 1.05
CDKN3-209ENST00000556102 LRRC2Q9BYS8 371 aa21.62■■□□□ 1.05
CDKN3-209ENST00000556102 ANO2Q9NQ90 1003 aa21.62■■□□□ 1.05
CDKN3-209ENST00000556102 NRCAMQ92823 1304 aa21.61■■□□□ 1.05
CDKN3-209ENST00000556102 ATP9AO75110 1047 aa21.61■■□□□ 1.05
CDKN3-209ENST00000556102 ITGB5P18084 799 aa21.61■■□□□ 1.05
CDKN3-209ENST00000556102 FAM26DQ5JW98 314 aa21.61■■□□□ 1.05
CDKN3-209ENST00000556102 FANCBQ8NB91 859 aa21.61■■□□□ 1.05
CDKN3-209ENST00000556102 OSBPL7Q9BZF2 842 aa21.61■■□□□ 1.05
CDKN3-209ENST00000556102 UBIAD1Q9Y5Z9 338 aa21.61■■□□□ 1.05
CDKN3-209ENST00000556102 hCG_1642624A0A1W2PR95 340 aa21.6■■□□□ 1.05
CDKN3-209ENST00000556102 SPDYE3A6NKU9 549 aa21.6■■□□□ 1.05
CDKN3-209ENST00000556102 UBE2SQ16763 222 aa21.6■■□□□ 1.05
CDKN3-209ENST00000556102 MICU3Q86XE3 530 aa21.6■■□□□ 1.05
CDKN3-209ENST00000556102 CCDC82Q8N4S0 544 aa21.6■■□□□ 1.05
CDKN3-209ENST00000556102 FBXO22Q8NEZ5 403 aa21.6■■□□□ 1.05
CDKN3-209ENST00000556102 APBB2Q92870 758 aa21.6■■□□□ 1.05
CDKN3-209ENST00000556102 C17orf80Q9BSJ5 609 aa21.6■■□□□ 1.05
CDKN3-209ENST00000556102 COL4A6Q14031 1691 aa21.6■■□□□ 1.05
CDKN3-209ENST00000556102 MTMR1Q13613 665 aa21.59■■□□□ 1.05
CDKN3-209ENST00000556102 RPAINQ86UA6 219 aa21.59■■□□□ 1.05
CDKN3-209ENST00000556102 NLRC5Q86WI3 1866 aa21.59■■□□□ 1.05
CDKN3-209ENST00000556102 SEPT1Q8WYJ6 367 aa21.59■■□□□ 1.05
CDKN3-209ENST00000556102 TOP1MTQ969P6 601 aa21.59■■□□□ 1.05
CDKN3-209ENST00000556102 SAMD11Q96NU1 681 aa21.59■■□□□ 1.05
CDKN3-209ENST00000556102 PCDHA6Q9UN73 950 aa21.59■■□□□ 1.05
CDKN3-209ENST00000556102 PCDHA8Q9Y5H6 950 aa21.59■■□□□ 1.05
CDKN3-209ENST00000556102 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.58■■□□□ 1.05
CDKN3-209ENST00000556102 GSTTP1A0A1W2PQM5 241 aa21.58■■□□□ 1.05
CDKN3-209ENST00000556102 MAFGO15525 162 aa21.58■■□□□ 1.05
CDKN3-209ENST00000556102 PPFIA1Q13136 1202 aa21.58■■□□□ 1.05
CDKN3-209ENST00000556102 RNF20Q5VTR2 975 aa21.58■■□□□ 1.05
CDKN3-209ENST00000556102 TAF2Q6P1X5 1199 aa21.58■■□□□ 1.05
CDKN3-209ENST00000556102 SYNE3Q6ZMZ3 975 aa21.58■■□□□ 1.05
CDKN3-209ENST00000556102 HEATR3Q7Z4Q2 680 aa21.58■■□□□ 1.05
CDKN3-209ENST00000556102 YME1L1Q96TA2 773 aa21.58■■□□□ 1.05
CDKN3-209ENST00000556102 IFIH1Q9BYX4 1025 aaKnown RBP21.58■■□□□ 1.05
CDKN3-209ENST00000556102 EHMT1Q9H9B1 1298 aa21.58■■□□□ 1.05
CDKN3-209ENST00000556102 JADE2Q9NQC1 790 aa21.58■■□□□ 1.05
CDKN3-209ENST00000556102 ERAP1Q9NZ08 941 aa21.58■■□□□ 1.05
CDKN3-209ENST00000556102 UPP2O95045 317 aa21.57■■□□□ 1.04
CDKN3-209ENST00000556102 COL9A1P20849 921 aa21.57■■□□□ 1.04
CDKN3-209ENST00000556102 BMP2KLQ5H9B9 411 aa21.57■■□□□ 1.04
CDKN3-209ENST00000556102 APOA5Q6Q788 366 aa21.57■■□□□ 1.04
CDKN3-209ENST00000556102 RBM28Q9NW13 759 aaKnown RBP21.57■■□□□ 1.04
CDKN3-209ENST00000556102 PKD2L1Q9P0L9 805 aa21.57■■□□□ 1.04
CDKN3-209ENST00000556102 RALGAPA2Q2PPJ7 1873 aa21.57■■□□□ 1.04
CDKN3-209ENST00000556102 CNTNAP5Q8WYK1 1306 aa21.56■■□□□ 1.04
CDKN3-209ENST00000556102 CHRNA1P02708 482 aa21.56■■□□□ 1.04
CDKN3-209ENST00000556102 GRIK4Q16099 956 aa21.56■■□□□ 1.04
CDKN3-209ENST00000556102 EPC2Q52LR7 807 aa21.56■■□□□ 1.04
CDKN3-209ENST00000556102 RUFY4Q6ZNE9 571 aa21.56■■□□□ 1.04
CDKN3-209ENST00000556102 RSPH3Q86UC2 560 aa21.56■■□□□ 1.04
CDKN3-209ENST00000556102 GLG1Q92896 1179 aa21.56■■□□□ 1.04
CDKN3-209ENST00000556102 NEK1Q96PY6 1258 aa21.56■■□□□ 1.04
CDKN3-209ENST00000556102 SMARCAD1Q9H4L7 1026 aa21.56■■□□□ 1.04
CDKN3-209ENST00000556102 MBLAC1A4D2B0 266 aaPredicted RBP21.55■■□□□ 1.04
CDKN3-209ENST00000556102 MARK3P27448 753 aa21.55■■□□□ 1.04
CDKN3-209ENST00000556102 MGAT3Q09327 533 aa21.55■■□□□ 1.04
CDKN3-209ENST00000556102 WWC2Q6AWC2 1192 aa21.55■■□□□ 1.04
CDKN3-209ENST00000556102 TEX2Q8IWB9 1127 aa21.55■■□□□ 1.04
CDKN3-209ENST00000556102 MRPL38Q96DV4 380 aaKnown RBP21.55■■□□□ 1.04
CDKN3-209ENST00000556102 UBE2ZQ9H832 354 aaPredicted RBP21.55■■□□□ 1.04
CDKN3-209ENST00000556102 TUBE1Q9UJT0 475 aa21.55■■□□□ 1.04
CDKN3-209ENST00000556102 GHRP10912 638 aa21.54■■□□□ 1.04
CDKN3-209ENST00000556102 PTPROQ16827 1216 aa21.54■■□□□ 1.04
CDKN3-209ENST00000556102 PPP1R18Q6NYC8 613 aa21.54■■□□□ 1.04
CDKN3-209ENST00000556102 MXRA8Q9BRK3 442 aa21.54■■□□□ 1.04
CDKN3-209ENST00000556102 JPH1Q9HDC5 661 aaPredicted RBP21.54■■□□□ 1.04
CDKN3-209ENST00000556102 RIC8AQ9NPQ8 531 aa21.54■■□□□ 1.04
CDKN3-209ENST00000556102 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.53■■□□□ 1.04
CDKN3-209ENST00000556102 NAPAP54920 295 aa21.53■■□□□ 1.04
CDKN3-209ENST00000556102 EXOSC10Q01780 885 aaKnown RBP21.53■■□□□ 1.04
CDKN3-209ENST00000556102 LPIN1Q14693 890 aa21.53■■□□□ 1.04
CDKN3-209ENST00000556102 RTN1Q16799 776 aa21.53■■□□□ 1.04
CDKN3-209ENST00000556102 MARCH8Q5T0T0 291 aa21.53■■□□□ 1.04
CDKN3-209ENST00000556102 DHX32Q7L7V1 743 aaKnown RBP21.53■■□□□ 1.04
CDKN3-209ENST00000556102 TMEM192Q8IY95 271 aa21.53■■□□□ 1.04
CDKN3-209ENST00000556102 KCNH7Q9NS40 1196 aa21.53■■□□□ 1.04
CDKN3-209ENST00000556102 SLC9A2Q9UBY0 812 aa21.53■■□□□ 1.04
CDKN3-209ENST00000556102 TTC3P53804 2025 aa21.53■■□□□ 1.04
CDKN3-209ENST00000556102 RRN3P2A6NIE6 340 aa21.52■■□□□ 1.04
CDKN3-209ENST00000556102 H3BNC9 293 aa21.52■■□□□ 1.04
CDKN3-209ENST00000556102 hCG_1984214I3L0E3 225 aa21.52■■□□□ 1.04
CDKN3-209ENST00000556102 ZBTB43O43298 467 aa21.52■■□□□ 1.04
CDKN3-209ENST00000556102 FOSP01100 380 aaPredicted RBP21.52■■□□□ 1.04
CDKN3-209ENST00000556102 RPLP2P05387 115 aaKnown RBP21.52■■□□□ 1.04
CDKN3-209ENST00000556102 FUT2Q10981 343 aa21.52■■□□□ 1.04
CDKN3-209ENST00000556102 GPM6BQ13491 265 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms