RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 ITGB5P18084 799 aa13.2□□□□□ -0.3
LRP1-209ENST00000555941 TCF7P36402 384 aaPredicted RBP13.2□□□□□ -0.3
LRP1-209ENST00000555941 ARHGAP4P98171 946 aa13.2□□□□□ -0.3
LRP1-209ENST00000555941 TFF2Q03403 129 aa13.2□□□□□ -0.3
LRP1-209ENST00000555941 MTMR1Q13613 665 aa13.2□□□□□ -0.3
LRP1-209ENST00000555941 UTP14CQ5TAP6 766 aaKnown RBP13.2□□□□□ -0.3
LRP1-209ENST00000555941 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.2□□□□□ -0.3
LRP1-209ENST00000555941 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
LRP1-209ENST00000555941 LMBR1Q8WVP7 490 aa13.2□□□□□ -0.3
LRP1-209ENST00000555941 TNPO1Q92973 898 aaKnown RBP13.2□□□□□ -0.3
LRP1-209ENST00000555941 TOP1MTQ969P6 601 aa13.2□□□□□ -0.3
LRP1-209ENST00000555941 RBM28Q9NW13 759 aaKnown RBP13.2□□□□□ -0.3
LRP1-209ENST00000555941 ERAP1Q9NZ08 941 aa13.2□□□□□ -0.3
LRP1-209ENST00000555941 UBIAD1Q9Y5Z9 338 aa13.2□□□□□ -0.3
LRP1-209ENST00000555941 COL4A4P53420 1690 aaPredicted RBP13.19□□□□□ -0.3
LRP1-209ENST00000555941 MUC3AQ02505 3323 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 ATP9AO75110 1047 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 RXRAP19793 462 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 TSGA10IPQ3SY00 556 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 KRT40Q6A162 431 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 PPP1R18Q6NYC8 613 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 FAM117BQ6P1L5 589 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 RSPH3Q86UC2 560 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 TRIM50Q86XT4 487 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 MYOCDQ8IZQ8 938 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 CMTR1Q8N1G2 835 aaKnown RBP13.19□□□□□ -0.3
LRP1-209ENST00000555941 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 GLT8D2Q9H1C3 349 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 SMARCAD1Q9H4L7 1026 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 JADE2Q9NQC1 790 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 PCDHA6Q9UN73 950 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 PCDHA8Q9Y5H6 950 aa13.19□□□□□ -0.3
LRP1-209ENST00000555941 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 TCF20Q9UGU0 1960 aaKnown RBP13.18□□□□□ -0.3
LRP1-209ENST00000555941 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 hCG_1984214I3L0E3 225 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 FOSP01100 380 aaPredicted RBP13.18□□□□□ -0.3
LRP1-209ENST00000555941 SP4Q02446 784 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 KRT32Q14532 448 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 APOA5Q6Q788 366 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 FAM43BQ6ZT52 329 aaPredicted RBP13.18□□□□□ -0.3
LRP1-209ENST00000555941 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
LRP1-209ENST00000555941 DHX32Q7L7V1 743 aaKnown RBP13.18□□□□□ -0.3
LRP1-209ENST00000555941 HEATR3Q7Z4Q2 680 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 SPRED2Q7Z698 418 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 MICU3Q86XE3 530 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 CCDC82Q8N4S0 544 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 ZNF713Q8N859 430 aaPredicted RBP13.18□□□□□ -0.3
LRP1-209ENST00000555941 FBXO22Q8NEZ5 403 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 GDPD5Q8WTR4 605 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 GLG1Q92896 1179 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 IFIH1Q9BYX4 1025 aaKnown RBP13.18□□□□□ -0.3
LRP1-209ENST00000555941 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
LRP1-209ENST00000555941 MBLAC1A4D2B0 266 aaPredicted RBP13.17□□□□□ -0.3
LRP1-209ENST00000555941 RRN3P2A6NIE6 340 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 HMGB1P09429 215 aaKnown RBP13.17□□□□□ -0.3
LRP1-209ENST00000555941 CTSHP09668 335 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 KCNQ1P51787 676 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 RCAN1P53805 252 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 EXOSC10Q01780 885 aaKnown RBP13.17□□□□□ -0.3
LRP1-209ENST00000555941 PPFIA1Q13136 1202 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 UBE2SQ16763 222 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 PTPROQ16827 1216 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 YME1L1Q96TA2 773 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 MXRA8Q9BRK3 442 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 LRRC2Q9BYS8 371 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 JPH1Q9HDC5 661 aaPredicted RBP13.17□□□□□ -0.3
LRP1-209ENST00000555941 RIC8AQ9NPQ8 531 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 TUBE1Q9UJT0 475 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 XIRP2A4UGR9 3374 aa13.17□□□□□ -0.3
LRP1-209ENST00000555941 NFASCO94856 1347 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.16□□□□□ -0.3
LRP1-209ENST00000555941 hCG_1642624A0A1W2PR95 340 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 ZBTB43O43298 467 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 CHRNA1P02708 482 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
LRP1-209ENST00000555941 GRIK4Q16099 956 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 RTN1Q16799 776 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 EPC2Q52LR7 807 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 MRPL38Q96DV4 380 aaKnown RBP13.16□□□□□ -0.3
LRP1-209ENST00000555941 SDF4Q9BRK5 362 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 C17orf80Q9BSJ5 609 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 C1QTNF1Q9BXJ1 281 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 AZI2Q9H6S1 392 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 KCNH7Q9NS40 1196 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 SLC9A2Q9UBY0 812 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 TELO2Q9Y4R8 837 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 SQORQ9Y6N5 450 aa13.16□□□□□ -0.3
LRP1-209ENST00000555941 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.15□□□□□ -0.3
LRP1-209ENST00000555941 H3BNC9 293 aa13.15□□□□□ -0.3
LRP1-209ENST00000555941 SLC26A2P50443 739 aa13.15□□□□□ -0.3
LRP1-209ENST00000555941 ADCY7P51828 1080 aa13.15□□□□□ -0.3
LRP1-209ENST00000555941 NAPAP54920 295 aa13.15□□□□□ -0.3
LRP1-209ENST00000555941 MGAT3Q09327 533 aa13.15□□□□□ -0.3
LRP1-209ENST00000555941 FUT2Q10981 343 aa13.15□□□□□ -0.3
LRP1-209ENST00000555941 AP3B2Q13367 1082 aa13.15□□□□□ -0.3
LRP1-209ENST00000555941 CEP55Q53EZ4 464 aa13.15□□□□□ -0.3
LRP1-209ENST00000555941 MARCH8Q5T0T0 291 aa13.15□□□□□ -0.3
LRP1-209ENST00000555941 IER5Q5VY09 327 aa13.15□□□□□ -0.3
LRP1-209ENST00000555941 WWC2Q6AWC2 1192 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms