RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CEP72Q9P209 647 aa7.73□□□□□ -1.17
TDP1-213ENST00000555880 HCSTQ9UBK5 93 aa7.73□□□□□ -1.17
TDP1-213ENST00000555880 SERPINB13Q9UIV8 391 aa7.73□□□□□ -1.17
TDP1-213ENST00000555880 FAM184BQ9ULE4 1060 aa7.73□□□□□ -1.17
TDP1-213ENST00000555880 PCDHA12Q9UN75 941 aa7.73□□□□□ -1.17
TDP1-213ENST00000555880 DAGLAQ9Y4D2 1042 aa7.73□□□□□ -1.17
TDP1-213ENST00000555880 SSU72P8A0A1W2PR75 194 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 GOLGA6BA6NDN3 693 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 MPHOSPH10O00566 681 aaKnown RBP7.72□□□□□ -1.17
TDP1-213ENST00000555880 DPYSL4O14531 572 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 ZNF263O14978 683 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 ZBTB5O15062 677 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 PJA2O43164 708 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 MOCS3O95396 460 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 SERPING1P05155 500 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 KRT18P05783 430 aaKnown RBP7.72□□□□□ -1.17
TDP1-213ENST00000555880 AKR1B1P15121 316 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 GTF2IP78347 998 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 ATP2B2Q01814 1243 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 RAD51AP2Q09MP3 1159 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 COASYQ13057 564 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 LRRC41Q15345 812 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 UBE2SQ16763 222 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 CCNI2Q6ZMN8 369 aaPredicted RBP7.72□□□□□ -1.17
TDP1-213ENST00000555880 SLC51AQ86UW1 340 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 OSBPL9Q96SU4 736 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 ZBED2Q9BTP6 218 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 SELENOOQ9BVL4 669 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 MLXIPQ9HAP2 919 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 PCDHGA10Q9Y5H3 936 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 CAPN6Q9Y6Q1 641 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 ARFGEF1Q9Y6D6 1849 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 IGKV6D-41A0A0C4DH26 115 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 PDE2AO00408 941 aaPredicted RBP7.72□□□□□ -1.17
TDP1-213ENST00000555880 EPHB6O15197 1021 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 RPS6KA5O75582 802 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 ZMYND10O75800 440 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 APBA3O96018 575 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 SERPINB2P05120 415 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 GABPAQ06546 454 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 EHHADHQ08426 723 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 CAMK2BQ13554 666 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 CFAP221Q4G0U5 840 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 CREG2Q8IUH2 290 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 SPATA4Q8NEY3 305 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 SMCR8Q8TEV9 937 aaPredicted RBP7.72□□□□□ -1.17
TDP1-213ENST00000555880 BAP1Q92560 729 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 CRAMP1Q96RY5 1269 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 RUFY1Q96T51 708 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 RNF14Q9UBS8 474 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 POLLQ9UGP5 575 aa7.72□□□□□ -1.17
TDP1-213ENST00000555880 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.72□□□□□ -1.17
TDP1-213ENST00000555880 TULP2O00295 520 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 GYS1P13807 737 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 RXRBP28702 533 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 HOXA10P31260 410 aaPredicted RBP7.71□□□□□ -1.18
TDP1-213ENST00000555880 SLC1A4P43007 532 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 MATR3P43243 847 aaKnown RBP eCLIP7.71□□□□□ -1.18
TDP1-213ENST00000555880 CLK2P49760 499 aaKnown RBP7.71□□□□□ -1.18
TDP1-213ENST00000555880 RASSF7Q02833 373 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 GFPT1Q06210 699 aaPredicted RBP7.71□□□□□ -1.18
TDP1-213ENST00000555880 GLE1Q53GS7 698 aaKnown RBP7.71□□□□□ -1.18
TDP1-213ENST00000555880 FAM83BQ5T0W9 1011 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 HAUS3Q68CZ6 603 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 MCTP2Q6DN12 878 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 C8orf74Q6P047 294 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 NFRKBQ6P4R8 1299 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 EMBQ6PCB8 327 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 KCNK18Q7Z418 384 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 GPBP1Q86WP2 473 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 SLFN12Q8IYM2 578 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 ERMNQ8TAM6 284 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 FAM76AQ8TAV0 307 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 AENQ8WTP8 325 aaKnown RBP7.71□□□□□ -1.18
TDP1-213ENST00000555880 ZBTB9Q96C00 473 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 DNAJC19Q96DA6 116 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 LSM14BQ9BX40 385 aaKnown RBP7.71□□□□□ -1.18
TDP1-213ENST00000555880 COA1Q9GZY4 146 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 STIM2Q9P246 746 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 KIAA1024Q9UPX6 916 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 ATAD5Q96QE3 1844 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 LRRC37AA6NMS7 1700 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 QSER1Q2KHR3 1735 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 UBR3Q6ZT12 1888 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 KIF13BQ9NQT8 1826 aa7.71□□□□□ -1.18
TDP1-213ENST00000555880 GOLGA6CA6NDK9 693 aa7.7□□□□□ -1.18
TDP1-213ENST00000555880 F8W031 263 aaPredicted RBP7.7□□□□□ -1.18
TDP1-213ENST00000555880 RBAK-RBAKDNI3L0D1 243 aa7.7□□□□□ -1.18
TDP1-213ENST00000555880 PPEF1O14829 653 aaPredicted RBP7.7□□□□□ -1.18
TDP1-213ENST00000555880 RAD21O60216 631 aa7.7□□□□□ -1.18
TDP1-213ENST00000555880 OPA1O60313 960 aa7.7□□□□□ -1.18
TDP1-213ENST00000555880 PLA2G4BP0C869 781 aa7.7□□□□□ -1.18
TDP1-213ENST00000555880 GOLGA6DP0CG33 693 aa7.7□□□□□ -1.18
TDP1-213ENST00000555880 ERCC3P19447 782 aa7.7□□□□□ -1.18
TDP1-213ENST00000555880 GGCXP38435 758 aa7.7□□□□□ -1.18
TDP1-213ENST00000555880 USP11P51784 963 aa7.7□□□□□ -1.18
TDP1-213ENST00000555880 EPHB4P54760 987 aa7.7□□□□□ -1.18
TDP1-213ENST00000555880 POLR2FP61218 127 aaKnown RBP7.7□□□□□ -1.18
TDP1-213ENST00000555880 RAPGEF1Q13905 1077 aa7.7□□□□□ -1.18
TDP1-213ENST00000555880 ZCWPW2Q504Y3 356 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms