RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 Q7L0L9 218 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 OTOP2Q7RTS6 562 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 NECAB1Q8N987 351 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 RETREG2Q8NC44 543 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 BICD2Q8TD16 824 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 DHX38Q92620 1227 aaKnown RBP11.63□□□□□ -0.55
LINC00517-201ENST00000553396 IL17RAQ96F46 866 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 SDF4Q9BRK5 362 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 JPH1Q9HDC5 661 aaPredicted RBP11.63□□□□□ -0.55
LINC00517-201ENST00000553396 SH3GLB2Q9NR46 395 aa11.63□□□□□ -0.55
LINC00517-201ENST00000553396 ZNF215Q9UL58 517 aaPredicted RBP11.63□□□□□ -0.55
LINC00517-201ENST00000553396 GSTTP1A0A1W2PQM5 241 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 C17orf102A2RUQ5 167 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 MEIS1O00470 390 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 MAFGO15525 162 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 MARK3P27448 753 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 ITGB3BPQ13352 177 aaPredicted RBP11.62□□□□□ -0.55
LINC00517-201ENST00000553396 ME3Q16798 604 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 FAM109BQ6ICB4 259 aaPredicted RBP11.62□□□□□ -0.55
LINC00517-201ENST00000553396 PLA2G4DQ86XP0 818 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 CCDC155Q8N6L0 562 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 CAGE1Q8TC20 777 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 CRYGNQ8WXF5 182 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 GLG1Q92896 1179 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 WNT8BQ93098 351 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 AGO4Q9HCK5 861 aaKnown RBP11.62□□□□□ -0.55
LINC00517-201ENST00000553396 CXXC1Q9P0U4 656 aaPredicted RBP11.62□□□□□ -0.55
LINC00517-201ENST00000553396 SLC9A2Q9UBY0 812 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 PCDHA4Q9UN74 947 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 MYO9BQ13459 2157 aa11.62□□□□□ -0.55
LINC00517-201ENST00000553396 NFASCO94856 1347 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 STK36Q9NRP7 1315 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 MYH9P35579 1960 aaKnown RBP11.61□□□□□ -0.55
LINC00517-201ENST00000553396 WDR81Q562E7 1941 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 IGLV3-22A0A075B6J6 115 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 CTDNEP1O95476 244 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 FGBP02675 491 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 CYP3A4P08684 503 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 IQCF3P0C7M6 154 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 PTK7Q13308 1070 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 PRR16Q569H4 304 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 MCTP2Q6DN12 878 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 LRRC8DQ7L1W4 858 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 RPUSD2Q8IZ73 545 aaKnown RBP11.61□□□□□ -0.55
LINC00517-201ENST00000553396 DEFB123Q8N688 67 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 AFAP1L1Q8TED9 768 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 SEPT1Q8WYJ6 367 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 ATP6V0A1Q93050 837 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 VWCEQ96DN2 955 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 FAM161BQ96MY7 647 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 RNPEPQ9H4A4 650 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 GJB4Q9NTQ9 266 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 SETD4Q9NVD3 440 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 KCNJ14Q9UNX9 436 aa11.61□□□□□ -0.55
LINC00517-201ENST00000553396 LAMA2P24043 3122 aaKnown RBP11.61□□□□□ -0.55
LINC00517-201ENST00000553396 ZBBXA8MT70 800 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 GRXCR1A8MXD5 290 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 IPO5O00410 1097 aaKnown RBP11.6□□□□□ -0.55
LINC00517-201ENST00000553396 TREHO43280 583 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 CKBP12277 381 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 SELPP16109 830 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 ACTR2P61160 394 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 SMAD3P84022 425 aaKnown RBP11.6□□□□□ -0.55
LINC00517-201ENST00000553396 SETQ01105 290 aaPredicted RBP11.6□□□□□ -0.55
LINC00517-201ENST00000553396 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 NIPA1Q7RTP0 329 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 BLIDQ8IZY5 108 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 TBCKQ8TEA7 893 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 LMBR1Q8WVP7 490 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 HERVK_113Q902F9 699 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 GTF3C6Q969F1 213 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 ZNF577Q9BSK1 485 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 FTOQ9C0B1 505 aaKnown RBP eCLIP11.6□□□□□ -0.55
LINC00517-201ENST00000553396 ORC3Q9UBD5 711 aaPredicted RBP11.6□□□□□ -0.55
LINC00517-201ENST00000553396 CDH23Q9H251 3354 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 EMSYQ7Z589 1322 aa11.6□□□□□ -0.55
LINC00517-201ENST00000553396 PTPRSQ13332 1948 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.59□□□□□ -0.55
LINC00517-201ENST00000553396 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.59□□□□□ -0.55
LINC00517-201ENST00000553396 CCNE2O96020 404 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 PFKMP08237 780 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 CTSHP09668 335 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 HOXC8P31273 242 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 RFC2P35250 354 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 THPOP40225 353 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 CLCN6P51797 869 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 FOSBP53539 338 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 PPFIA1Q13136 1202 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 NPY5RQ15761 445 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 TRIM71Q2Q1W2 868 aaKnown RBP11.59□□□□□ -0.55
LINC00517-201ENST00000553396 ZNF618Q5T7W0 954 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 ZNF697Q5TEC3 545 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 RASIP1Q5U651 963 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 SERINC5Q86VE9 423 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 DAGLBQ8NCG7 672 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 PCYT2Q99447 389 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 C22orf23Q9BZE7 217 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 MTIF3Q9H2K0 278 aaKnown RBP11.59□□□□□ -0.55
LINC00517-201ENST00000553396 SMARCAD1Q9H4L7 1026 aa11.59□□□□□ -0.55
LINC00517-201ENST00000553396 AZI2Q9H6S1 392 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms