RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 IFIT3O14879 490 aaKnown RBP9.42□□□□□ -0.9
BEST3-211ENST00000552295 NMT2O60551 498 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 LARGE1O95461 756 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 RPLP1P05386 114 aaKnown RBP9.42□□□□□ -0.9
BEST3-211ENST00000552295 TSPY3P0CV98 308 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 TSPY8P0CW00 308 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 BMP3P12645 472 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 AKR1B1P15121 316 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 VEGFAP15692 232 aaPredicted RBP9.42□□□□□ -0.9
BEST3-211ENST00000552295 LIFRP42702 1097 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 EVCP57679 992 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 FGD1P98174 961 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 APOBRQ0VD83 1088 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 BECN1Q14457 450 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 RRP1BQ14684 758 aaKnown RBP9.42□□□□□ -0.9
BEST3-211ENST00000552295 SART3Q15020 963 aaKnown RBP9.42□□□□□ -0.9
BEST3-211ENST00000552295 EAPPQ56P03 285 aaPredicted RBP9.42□□□□□ -0.9
BEST3-211ENST00000552295 TMEM67Q5HYA8 995 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 NBPF12Q5TAG4 269 aaPredicted RBP9.42□□□□□ -0.9
BEST3-211ENST00000552295 PRAMEF18Q5VWM3 479 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.42□□□□□ -0.9
BEST3-211ENST00000552295 SGMS1Q86VZ5 419 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 IQCA1Q86XH1 822 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 ENAHQ8N8S7 591 aaPredicted RBP9.42□□□□□ -0.9
BEST3-211ENST00000552295 DCPSQ96C86 337 aaKnown RBP9.42□□□□□ -0.9
BEST3-211ENST00000552295 CCDC17Q96LX7 622 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 IPO9Q96P70 1041 aaKnown RBP9.42□□□□□ -0.9
BEST3-211ENST00000552295 UBAC1Q9BSL1 405 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 RNF208Q9H0X6 261 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 KCNF1Q9H3M0 494 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.42□□□□□ -0.9
BEST3-211ENST00000552295 IL17RBQ9NRM6 502 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 TCP11L1Q9NUJ3 509 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 TPCN1Q9ULQ1 816 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 ANGEL1Q9UNK9 670 aaKnown RBP9.42□□□□□ -0.9
BEST3-211ENST00000552295 LIMCH1Q9UPQ0 1083 aa9.42□□□□□ -0.9
BEST3-211ENST00000552295 ADM5C9JUS6 153 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 NOVP48745 357 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 JAG1P78504 1218 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 WTAPQ15007 396 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 ME3Q16798 604 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 SHROOM1Q2M3G4 852 aaPredicted RBP9.41□□□□□ -0.9
BEST3-211ENST00000552295 CERKLQ49MI3 558 aaPredicted RBP9.41□□□□□ -0.9
BEST3-211ENST00000552295 RCSD1Q6JBY9 416 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 BEND4Q6ZU67 534 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 MIGA2Q7L4E1 593 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 SHKBP1Q8TBC3 707 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 ANKS1AQ92625 1134 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 TMX3Q96JJ7 454 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 ZSCAN31Q96LW9 406 aaPredicted RBP9.41□□□□□ -0.9
BEST3-211ENST00000552295 KRTAP9-9Q9BYP9 154 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 KRTAP9-4Q9BYQ2 154 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 NMRK2Q9NPI5 230 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 BRPF3Q9ULD4 1205 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 UTRNP46939 3433 aa9.41□□□□□ -0.9
BEST3-211ENST00000552295 KLF18A0A0U1RQI7 1052 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 ERICH2A1L162 156 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 PDIA3P30101 505 aaKnown RBP9.4□□□□□ -0.9
BEST3-211ENST00000552295 GUCY1A2P33402 732 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 PREPP48147 710 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 ST3GAL1Q11201 340 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 CUL4AQ13619 759 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 CCDC178Q5BJE1 867 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 DCAF15Q66K64 600 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 FDX2Q6P4F2 183 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 APOA5Q6Q788 366 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 DLK2Q6UY11 383 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 KRT26Q7Z3Y9 468 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 DGKHQ86XP1 1220 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 DTX1Q86Y01 620 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 TMTC2Q8N394 836 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 HOOK2Q96ED9 719 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 ZNF274Q96GC6 653 aaPredicted RBP9.4□□□□□ -0.9
BEST3-211ENST00000552295 CEP95Q96GE4 821 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 RUSC1Q9BVN2 902 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 CNTN3Q9P232 1028 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 SALL4Q9UJQ4 1053 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 HIF3AQ9Y2N7 669 aa9.4□□□□□ -0.9
BEST3-211ENST00000552295 PHIPQ8WWQ0 1821 aa9.4□□□□□ -0.91
BEST3-211ENST00000552295 NID2Q14112 1375 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 CCDC69A6NI79 296 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 MPHOSPH10O00566 681 aaKnown RBP9.39□□□□□ -0.91
BEST3-211ENST00000552295 PFKFB2O60825 505 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 ADAMTS4O75173 837 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 CES1P23141 567 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 CAP2P40123 477 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 NLRP12P59046 1061 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 SEPT2Q15019 361 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 ABCB5Q2M3G0 1257 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 IFIT1BQ5T764 474 aaKnown RBP9.39□□□□□ -0.91
BEST3-211ENST00000552295 NFXL1Q6ZNB6 911 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 TMEM179Q6ZVK1 233 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 USP48Q86UV5 1035 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 ZNF526Q8TF50 670 aaPredicted RBP9.39□□□□□ -0.91
BEST3-211ENST00000552295 SLC7A3Q8WY07 619 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 CDCA5Q96FF9 252 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 GLIS2Q9BZE0 524 aaPredicted RBP9.39□□□□□ -0.91
BEST3-211ENST00000552295 MTMR4Q9NYA4 1195 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 ZNF112Q9UJU3 913 aa9.39□□□□□ -0.91
BEST3-211ENST00000552295 GOLGA8BA8MQT2 603 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms