RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 C11orf91Q3C1V1 193 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 CCDC144BQ3MJ40 725 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 ALDH1L2Q3SY69 923 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 TTC39AQ5SRH9 613 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 B4GALNT3Q6L9W6 998 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 NLRP8Q86W28 1048 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 SIAH1Q8IUQ4 282 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 HERC6Q8IVU3 1022 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 ETFBKMTQ8IXQ9 262 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 SPICE1Q8N0Z3 855 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 MIGA1Q8NAN2 632 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 REPS2Q8NFH8 660 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-214ENST00000540865 DDX11Q96FC9 970 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 IFT43Q96FT9 208 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 MFSD14AQ96MC6 490 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 TEX13BQ9BXU2 312 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 TRPV6Q9H1D0 765 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 UBE2ZQ9H832 354 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-214ENST00000540865 PIH1D3Q9NQM4 214 aaKnown RBP5.56□□□□□ -1.52
SNHG1-214ENST00000540865 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.56□□□□□ -1.52
SNHG1-214ENST00000540865 PPP1R9AQ9ULJ8 1098 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 USP20Q9Y2K6 914 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 MYO15AQ9UKN7 3530 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 BRWD1Q9NSI6 2320 aa5.56□□□□□ -1.52
SNHG1-214ENST00000540865 GRIN2DO15399 1336 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 CACNA1HO95180 2353 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 ZBTB39O15060 712 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 ADCY6O43306 1168 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 ZEB2O60315 1214 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 B4GALT4O60513 344 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 BRD1O95696 1058 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 GNAI3P08754 354 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 SUPT20HL2P0C7V6 817 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 ZAP70P43403 619 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 ICA1Q05084 483 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 CXCL17Q6UXB2 119 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 BTLAQ7Z6A9 289 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 Q8N3U1 123 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 SCLYQ96I15 445 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 CCDC17Q96LX7 622 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 MEIS3Q99687 375 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 KRTAP9-2Q9BYQ4 174 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 API5Q9BZZ5 524 aaKnown RBP5.55□□□□□ -1.52
SNHG1-214ENST00000540865 KATNBL1Q9H079 304 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 ALDH8A1Q9H2A2 487 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-214ENST00000540865 NDFIP2Q9NV92 336 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 FBXO28Q9NVF7 368 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 SWAP70Q9UH65 585 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 DMGDHQ9UI17 866 aaKnown RBP5.55□□□□□ -1.52
SNHG1-214ENST00000540865 PCDHGC4Q9Y5F7 938 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 PTPRZ1P23471 2315 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-214ENST00000540865 PLXNA1Q9UIW2 1896 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 SPTBN4Q9H254 2564 aa5.55□□□□□ -1.52
SNHG1-214ENST00000540865 ASTN1O14525 1302 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 ZNF536O15090 1300 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 TGFBR3LH3BV60 316 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 K7ELQ4 463 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-214ENST00000540865 ATP2A1O14983 1001 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 IDH1O75874 414 aaKnown RBP5.54□□□□□ -1.52
SNHG1-214ENST00000540865 BAIAP3O94812 1187 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 MAPTP10636 758 aaKnown RBP5.54□□□□□ -1.52
SNHG1-214ENST00000540865 IL9P15248 144 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 CD33P20138 364 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 KCNA5P22460 613 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 BEX3Q00994 111 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 TNFAIP2Q03169 654 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 TNP2Q05952 138 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 TYRO3Q06418 890 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 SFSWAPQ12872 951 aaKnown RBP5.54□□□□□ -1.52
SNHG1-214ENST00000540865 LBRQ14739 615 aaKnown RBP5.54□□□□□ -1.52
SNHG1-214ENST00000540865 FSCN1Q16658 493 aaKnown RBP5.54□□□□□ -1.52
SNHG1-214ENST00000540865 TNNI3KQ59H18 835 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 SNRNP48Q6IEG0 339 aaKnown RBP5.54□□□□□ -1.52
SNHG1-214ENST00000540865 HFE2Q6ZVN8 426 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 ARMCX2Q7L311 632 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 DEFB128Q7Z7B8 93 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 ATCAYQ86WG3 371 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 TREML1Q86YW5 311 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 HELQQ8TDG4 1101 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 GMCL1Q96IK5 515 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 FGD4Q96M96 766 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 CEP63Q96MT8 703 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 PSMG3-AS1Q96PY0 264 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 PRRX2Q99811 253 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 DBNDD2Q9BQY9 259 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 RIOK1Q9BRS2 568 aaKnown RBP5.54□□□□□ -1.52
SNHG1-214ENST00000540865 AP5M1Q9H0R1 490 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 MRS2Q9HD23 443 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 SMC4Q9NTJ3 1288 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 MCM9Q9NXL9 1143 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 PRKAG3Q9UGI9 489 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 FBXO40Q9UH90 709 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 GNEQ9Y223 722 aaKnown RBP5.54□□□□□ -1.52
SNHG1-214ENST00000540865 FAM50BQ9Y247 325 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 Q9Y3F1 56 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 GPC6Q9Y625 555 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-214ENST00000540865 FPGT-TNNI3KV9GXZ4 949 aa5.54□□□□□ -1.52
SNHG1-214ENST00000540865 SMCHD1A6NHR9 2005 aa5.53□□□□□ -1.52
SNHG1-214ENST00000540865 TNKSO95271 1327 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms