RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 DDX39AO00148 427 aaKnown RBP18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 CYP3A7P24462 503 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 CYP2C18P33260 490 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 ACTR2P61160 394 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 HMGN5P82970 282 aaKnown RBP18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 PTGISQ16647 500 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 MFSD5Q6N075 450 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 PIK3AP1Q6ZUJ8 805 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 TRIM50Q86XT4 487 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 LENG9Q96B70 501 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 NOC4LQ9BVI4 516 aaKnown RBP18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 HIPK3Q9H422 1215 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 BRMS1Q9HCU9 246 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 TBC1D22BQ9NU19 505 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 GTF2IRD1Q9UHL9 959 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 MMP1P03956 469 aa18.4■□□□□ 0.54
SSSCA1-202ENST00000526433 GUCY1B3Q02153 619 aa18.4■□□□□ 0.54
SSSCA1-202ENST00000526433 NR5A1Q13285 461 aa18.4■□□□□ 0.54
SSSCA1-202ENST00000526433 Q4G0T1 1027 aa18.4■□□□□ 0.54
SSSCA1-202ENST00000526433 HABP4Q5JVS0 413 aaKnown RBP18.4■□□□□ 0.54
SSSCA1-202ENST00000526433 FAM184AQ8NB25 1140 aa18.4■□□□□ 0.54
SSSCA1-202ENST00000526433 SMARCAD1Q9H4L7 1026 aa18.4■□□□□ 0.54
SSSCA1-202ENST00000526433 NOD1Q9Y239 953 aa18.4■□□□□ 0.54
SSSCA1-202ENST00000526433 BTBD18B2RXH4 712 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 MSH4O15457 936 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 LGR5O75473 907 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 ATG7O95352 703 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 TDP2O95551 362 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 CCNE2O96020 404 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 SMIM10L2AP0DMW4 78 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 SMIM10L2BP0DMW5 78 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 ZNF200P98182 395 aaPredicted RBP18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 HIC1Q14526 733 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 LETM2Q2VYF4 491 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 EARS2Q5JPH6 523 aaKnown RBP18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 MOXD1Q6UVY6 613 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 DIS3L2Q8IYB7 885 aaKnown RBP18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 GLG1Q92896 1179 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 TNFRSF25Q93038 417 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 C8orf76Q96K31 380 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 MBOAT7Q96N66 472 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 PCYT2Q99447 389 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 RNPEPQ9H4A4 650 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 UMODL1Q5DID0 1318 aa18.39■□□□□ 0.53
SSSCA1-202ENST00000526433 RANBP2P49792 3224 aaKnown RBP18.38■□□□□ 0.53
SSSCA1-202ENST00000526433 A0A1W2PPC1 479 aa18.38■□□□□ 0.53
SSSCA1-202ENST00000526433 CCL23P55773 120 aa18.38■□□□□ 0.53
SSSCA1-202ENST00000526433 FPGSQ05932 587 aa18.38■□□□□ 0.53
SSSCA1-202ENST00000526433 ABHD15Q6UXT9 468 aa18.38■□□□□ 0.53
SSSCA1-202ENST00000526433 NEK8Q86SG6 692 aa18.38■□□□□ 0.53
SSSCA1-202ENST00000526433 TMEM199Q8N511 208 aa18.38■□□□□ 0.53
SSSCA1-202ENST00000526433 CTAGE1Q96RT6 745 aa18.38■□□□□ 0.53
SSSCA1-202ENST00000526433 C17orf102A2RUQ5 167 aa18.37■□□□□ 0.53
SSSCA1-202ENST00000526433 FAM205CA6NFA0 338 aa18.37■□□□□ 0.53
SSSCA1-202ENST00000526433 STAT5BP51692 787 aa18.37■□□□□ 0.53
SSSCA1-202ENST00000526433 EPHB4P54760 987 aa18.37■□□□□ 0.53
SSSCA1-202ENST00000526433 SAFBQ15424 915 aaKnown RBP eCLIP18.37■□□□□ 0.53
SSSCA1-202ENST00000526433 FBXO18Q8NFZ0 1043 aa18.37■□□□□ 0.53
SSSCA1-202ENST00000526433 SLC5A5Q92911 643 aa18.37■□□□□ 0.53
SSSCA1-202ENST00000526433 AZI2Q9H6S1 392 aa18.37■□□□□ 0.53
SSSCA1-202ENST00000526433 SETD4Q9NVD3 440 aa18.37■□□□□ 0.53
SSSCA1-202ENST00000526433 ERAP1Q9NZ08 941 aa18.37■□□□□ 0.53
SSSCA1-202ENST00000526433 DDX25Q9UHL0 483 aaKnown RBP18.37■□□□□ 0.53
SSSCA1-202ENST00000526433 IGKV6D-21A0A0A0MT36 114 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 CSF2RAP15509 400 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 MARK3P27448 753 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 KRT76Q01546 638 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 PPIGQ13427 754 aaKnown RBP eCLIP18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 BFSP2Q13515 415 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 PPP4R3AQ6IN85 833 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 ZNF746Q6NUN9 644 aaPredicted RBP18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 MIS18BP1Q6P0N0 1132 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 PLPPR4Q7Z2D5 763 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 EMSYQ7Z589 1322 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 TDHQ8IZJ6 230 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 RETREG2Q8NC44 543 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 ATP6V0A1Q93050 837 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 GJA10Q969M2 543 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 RIT2Q99578 217 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 WNT8AQ9H1J5 351 aa18.36■□□□□ 0.53
SSSCA1-202ENST00000526433 BACH1O14867 736 aa18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 CCNT1O60563 726 aaKnown RBP18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 GAS7O60861 476 aa18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 GNAT1P11488 350 aa18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 GCFC2P16383 781 aaKnown RBP18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 HOXC8P31273 242 aa18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 PTK7Q13308 1070 aa18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 SHHQ15465 462 aa18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 LRCH2Q5VUJ6 765 aa18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 SWSAP1Q6NVH7 229 aa18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 C16orf59Q7L2K0 433 aa18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 DHX38Q92620 1227 aaKnown RBP18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 SCLYQ96I15 445 aa18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 NAP1L4Q99733 375 aaKnown RBP18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 TEKT3Q9BXF9 490 aa18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 TCEAL9Q9UHQ7 104 aa18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 MYH9P35579 1960 aaKnown RBP18.35■□□□□ 0.53
SSSCA1-202ENST00000526433 PITPNM1O00562 1244 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 TREHO43280 583 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms