RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 HOXC8P31273 242 aa25.46■■□□□ 1.67
CKLF-206ENST00000526149 CCL23P55773 120 aa25.46■■□□□ 1.67
CKLF-206ENST00000526149 SHHQ15465 462 aa25.46■■□□□ 1.67
CKLF-206ENST00000526149 PRR16Q569H4 304 aa25.46■■□□□ 1.67
CKLF-206ENST00000526149 C16orf59Q7L2K0 433 aa25.46■■□□□ 1.67
CKLF-206ENST00000526149 DHX38Q92620 1227 aaKnown RBP25.46■■□□□ 1.67
CKLF-206ENST00000526149 SDF4Q9BRK5 362 aa25.46■■□□□ 1.67
CKLF-206ENST00000526149 CCNE2O96020 404 aa25.45■■□□□ 1.66
CKLF-206ENST00000526149 XBP1P17861 261 aa25.45■■□□□ 1.66
CKLF-206ENST00000526149 VWCEQ96DN2 955 aa25.45■■□□□ 1.66
CKLF-206ENST00000526149 RNPEPQ9H4A4 650 aa25.45■■□□□ 1.66
CKLF-206ENST00000526149 SH2B1Q9NRF2 756 aaPredicted RBP25.45■■□□□ 1.66
CKLF-206ENST00000526149 IPO5O00410 1097 aaKnown RBP25.44■■□□□ 1.66
CKLF-206ENST00000526149 SOX1O00570 391 aaPredicted RBP25.44■■□□□ 1.66
CKLF-206ENST00000526149 LGR5O75473 907 aa25.44■■□□□ 1.66
CKLF-206ENST00000526149 ATG7O95352 703 aa25.44■■□□□ 1.66
CKLF-206ENST00000526149 SMIM10L2AP0DMW4 78 aa25.44■■□□□ 1.66
CKLF-206ENST00000526149 SMIM10L2BP0DMW5 78 aa25.44■■□□□ 1.66
CKLF-206ENST00000526149 ACTR2P61160 394 aa25.44■■□□□ 1.66
CKLF-206ENST00000526149 SETQ01105 290 aaPredicted RBP25.44■■□□□ 1.66
CKLF-206ENST00000526149 NONOQ15233 471 aaKnown RBP eCLIP25.44■■□□□ 1.66
CKLF-206ENST00000526149 EARS2Q5JPH6 523 aaKnown RBP25.44■■□□□ 1.66
CKLF-206ENST00000526149 KRT25Q7Z3Z0 450 aa25.44■■□□□ 1.66
CKLF-206ENST00000526149 TMEM199Q8N511 208 aa25.44■■□□□ 1.66
CKLF-206ENST00000526149 SCLYQ96I15 445 aa25.44■■□□□ 1.66
CKLF-206ENST00000526149 LLPHQ9BRT6 129 aaKnown RBP25.44■■□□□ 1.66
CKLF-206ENST00000526149 ZNF577Q9BSK1 485 aa25.44■■□□□ 1.66
CKLF-206ENST00000526149 DDX39AO00148 427 aaKnown RBP25.43■■□□□ 1.66
CKLF-206ENST00000526149 TDP2O95551 362 aa25.43■■□□□ 1.66
CKLF-206ENST00000526149 INF2Q27J81 1249 aa25.43■■□□□ 1.66
CKLF-206ENST00000526149 TNFRSF25Q93038 417 aa25.43■■□□□ 1.66
CKLF-206ENST00000526149 WNT8BQ93098 351 aa25.43■■□□□ 1.66
CKLF-206ENST00000526149 MBOAT7Q96N66 472 aa25.43■■□□□ 1.66
CKLF-206ENST00000526149 NOD1Q9Y239 953 aa25.43■■□□□ 1.66
CKLF-206ENST00000526149 EMSYQ7Z589 1322 aa25.42■■□□□ 1.66
CKLF-206ENST00000526149 CYP3A7-CYP3A51PA0A087WV96 503 aa25.42■■□□□ 1.66
CKLF-206ENST00000526149 MSH4O15457 936 aa25.42■■□□□ 1.66
CKLF-206ENST00000526149 CYP3A7P24462 503 aa25.42■■□□□ 1.66
CKLF-206ENST00000526149 FOSBP53539 338 aa25.42■■□□□ 1.66
CKLF-206ENST00000526149 NR5A1Q13285 461 aa25.42■■□□□ 1.66
CKLF-206ENST00000526149 TRIM71Q2Q1W2 868 aaKnown RBP25.42■■□□□ 1.66
CKLF-206ENST00000526149 LRIT3Q3SXY7 679 aa25.42■■□□□ 1.66
CKLF-206ENST00000526149 KRT40Q6A162 431 aa25.42■■□□□ 1.66
CKLF-206ENST00000526149 ZNF215Q9UL58 517 aaPredicted RBP25.42■■□□□ 1.66
CKLF-206ENST00000526149 C17orf102A2RUQ5 167 aa25.41■■□□□ 1.66
CKLF-206ENST00000526149 FAM205CA6NFA0 338 aa25.41■■□□□ 1.66
CKLF-206ENST00000526149 ST18O60284 1047 aa25.41■■□□□ 1.66
CKLF-206ENST00000526149 ACRP10323 421 aa25.41■■□□□ 1.66
CKLF-206ENST00000526149 ADAM17P78536 824 aa25.41■■□□□ 1.66
CKLF-206ENST00000526149 PPIGQ13427 754 aaKnown RBP eCLIP25.41■■□□□ 1.66
CKLF-206ENST00000526149 Q4G0T1 1027 aa25.41■■□□□ 1.66
CKLF-206ENST00000526149 ABHD15Q6UXT9 468 aa25.41■■□□□ 1.66
CKLF-206ENST00000526149 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.41■■□□□ 1.662e-10■□□□□ 8.1
CKLF-206ENST00000526149 SMARCAD1Q9H4L7 1026 aa25.41■■□□□ 1.66
CKLF-206ENST00000526149 TBC1D22BQ9NU19 505 aa25.41■■□□□ 1.66
CKLF-206ENST00000526149 SETD4Q9NVD3 440 aa25.41■■□□□ 1.66
CKLF-206ENST00000526149 IGKV6D-21A0A0A0MT36 114 aa25.4■■□□□ 1.66
CKLF-206ENST00000526149 PITPNM1O00562 1244 aa25.4■■□□□ 1.66
CKLF-206ENST00000526149 MMP1P03956 469 aa25.4■■□□□ 1.66
CKLF-206ENST00000526149 RBL2Q08999 1139 aa25.4■■□□□ 1.66
CKLF-206ENST00000526149 PTK7Q13308 1070 aa25.4■■□□□ 1.66
CKLF-206ENST00000526149 TMEM240Q5SV17 173 aa25.4■■□□□ 1.66
CKLF-206ENST00000526149 MOXD1Q6UVY6 613 aa25.4■■□□□ 1.66
CKLF-206ENST00000526149 PIK3AP1Q6ZUJ8 805 aa25.4■■□□□ 1.66
CKLF-206ENST00000526149 GJA10Q969M2 543 aa25.4■■□□□ 1.66
CKLF-206ENST00000526149 IL23AQ9NPF7 189 aa25.4■■□□□ 1.66
CKLF-206ENST00000526149 CCDC194A0A1B0GVG4 234 aa25.39■■□□□ 1.66
CKLF-206ENST00000526149 RBAK-RBAKDNI3L0D1 243 aa25.39■■□□□ 1.66
CKLF-206ENST00000526149 TREHO43280 583 aa25.39■■□□□ 1.66
CKLF-206ENST00000526149 MARK3P27448 753 aa25.39■■□□□ 1.66
CKLF-206ENST00000526149 KRT2P35908 639 aa25.39■■□□□ 1.66
CKLF-206ENST00000526149 SERINC5Q86VE9 423 aa25.39■■□□□ 1.66
CKLF-206ENST00000526149 IL27Q8NEV9 243 aa25.39■■□□□ 1.66
CKLF-206ENST00000526149 GLG1Q92896 1179 aa25.39■■□□□ 1.66
CKLF-206ENST00000526149 SLC5A5Q92911 643 aa25.39■■□□□ 1.66
CKLF-206ENST00000526149 ERAP1Q9NZ08 941 aa25.39■■□□□ 1.66
CKLF-206ENST00000526149 LAMA3Q16787 3333 aa25.38■■□□□ 1.65
CKLF-206ENST00000526149 BTBD18B2RXH4 712 aa25.38■■□□□ 1.65
CKLF-206ENST00000526149 IQCF3P0C7M6 154 aa25.38■■□□□ 1.65
CKLF-206ENST00000526149 BFSP2Q13515 415 aa25.38■■□□□ 1.65
CKLF-206ENST00000526149 GPNMBQ14956 572 aa25.38■■□□□ 1.65
CKLF-206ENST00000526149 TRAF7Q6Q0C0 670 aa25.38■■□□□ 1.65
CKLF-206ENST00000526149 ZNF365Q70YC5 407 aa25.38■■□□□ 1.65
CKLF-206ENST00000526149 PLPPR4Q7Z2D5 763 aa25.38■■□□□ 1.65
CKLF-206ENST00000526149 CAGE1Q8TC20 777 aa25.38■■□□□ 1.65
CKLF-206ENST00000526149 ATP6V0A1Q93050 837 aa25.38■■□□□ 1.65
CKLF-206ENST00000526149 LRCH3Q96II8 777 aa25.38■■□□□ 1.65
CKLF-206ENST00000526149 TMX3Q96JJ7 454 aa25.38■■□□□ 1.65
CKLF-206ENST00000526149 STAT5BP51692 787 aa25.37■■□□□ 1.65
CKLF-206ENST00000526149 GUCY1B3Q02153 619 aa25.37■■□□□ 1.65
CKLF-206ENST00000526149 LETM2Q2VYF4 491 aa25.37■■□□□ 1.65
CKLF-206ENST00000526149 ZNF746Q6NUN9 644 aaPredicted RBP25.37■■□□□ 1.65
CKLF-206ENST00000526149 NEK8Q86SG6 692 aa25.37■■□□□ 1.65
CKLF-206ENST00000526149 CCDC60Q8IWA6 550 aaPredicted RBP25.37■■□□□ 1.65
CKLF-206ENST00000526149 DIS3L2Q8IYB7 885 aaKnown RBP25.37■■□□□ 1.65
CKLF-206ENST00000526149 RETREG2Q8NC44 543 aa25.37■■□□□ 1.65
CKLF-206ENST00000526149 LMBR1Q8WVP7 490 aa25.37■■□□□ 1.65
CKLF-206ENST00000526149 TRIP12Q14669 1992 aaPredicted RBP25.36■■□□□ 1.65
CKLF-206ENST00000526149 SLC37A4O43826 429 aa25.36■■□□□ 1.65
CKLF-206ENST00000526149 CKBP12277 381 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms