RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 HMGA2P52926 109 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 FOXO4P98177 505 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 ZNF200P98182 395 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 STRN3Q13033 797 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 STAT4Q14765 748 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 KIR3DS1Q14943 382 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 PLEKHN1Q494U1 663 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 VWA3BQ502W6 1294 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 NBPF12Q5TAG4 269 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 ZNF280DQ6N043 979 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 CCDC70Q6NSX1 233 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 VHLLQ6RSH7 139 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 TMC3Q7Z5M5 1100 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 SAPCD2Q86UD0 394 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 SMAP1Q8IYB5 467 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 ENAHQ8N8S7 591 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 PJA1Q8NG27 643 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 FNIP1Q8TF40 1166 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 EXOC2Q96KP1 924 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 CLUHP3Q96NS8 147 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 CDC6Q99741 560 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 SPATA25Q9BR10 227 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 SARGQ9BW04 601 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 RHOBTB2Q9BYZ6 727 aa3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 INO80BQ9C086 356 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 CCDC8Q9H0W5 538 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC4-207ENST00000526141 TRBV23-1A0A0A0MS06 115 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 TRAV20A0A0B4J274 112 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 A0A1W2PQJ5 194 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 VSTM5A8MXK1 200 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 OVOL3O00110 214 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 GABRDO14764 452 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 PRPF3O43395 683 aaKnown RBP3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 ZNF500O60304 480 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 MYL3P08590 195 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 RAG1P15918 1043 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 SDSP20132 328 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 L1CAMP32004 1257 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 CNR2P34972 360 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 GDF5P43026 501 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 GJA9P57773 515 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 ALFQ53S48 1182 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 L1TD1Q5T7N2 865 aaKnown RBP3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 SYDE2Q5VT97 1194 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 FOXB2Q5VYV0 432 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 IL31Q6EBC2 164 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 PAQR3Q6TCH7 311 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 LHFPL2Q6ZUX7 228 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 HDGFL2Q7Z4V5 671 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 TTC9BQ8N6N2 239 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 SAMD11Q96NU1 681 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 CDADC1Q9BWV3 514 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 C1QTNF3Q9BXJ4 246 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 RNF38Q9H0F5 515 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 ERVK13-1Q9NX77 482 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 NRBP1Q9UHY1 535 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 TRHDEQ9UKU6 1024 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 POLR3KQ9Y2Y1 108 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 DAAM1Q9Y4D1 1078 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 PPP2R3BQ9Y5P8 575 aa3.79□□□□□ -1.8
TRAPPC4-207ENST00000526141 RASSF10A6NK89 507 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 SRGAP3O43295 1099 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 NOBOXO60393 691 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 DNAJC8O75937 253 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 UBOX5O94941 541 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 FBXO21O94952 628 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 CYBBP04839 570 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 NCAM1P13591 858 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 PHKG2P15735 406 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 BMP8BP34820 402 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 NEK3P51956 506 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 SUMO1P63165 101 aaKnown RBP3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 TCIRG1Q13488 830 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 HLA-DQA1Q5Y7H0 255 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 CCDC174Q6PII3 467 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 MORC1Q86VD1 984 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 SCUBE1Q8IWY4 988 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 CPXCR1Q8N123 301 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 CNTD1Q8N815 330 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 ANKRD42Q8N9B4 389 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 STRBPQ96SI9 672 aaKnown RBP3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 TTC1Q99614 292 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 ELAC2Q9BQ52 826 aaKnown RBP3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 TRIM8Q9BZR9 551 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 TCF7L1Q9HCS4 588 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 ARHGEF4Q9NR80 690 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 CHST7Q9NS84 486 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 IMPACTQ9P2X3 320 aa3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 PUF60Q9UHX1 559 aaKnown RBP3.78□□□□□ -1.8
TRAPPC4-207ENST00000526141 A0A1B0GTL3 188 aa3.77□□□□□ -1.81
TRAPPC4-207ENST00000526141 FAM83GA6ND36 823 aa3.77□□□□□ -1.81
TRAPPC4-207ENST00000526141 TIMM44O43615 452 aa3.77□□□□□ -1.81
TRAPPC4-207ENST00000526141 ZEB2O60315 1214 aa3.77□□□□□ -1.81
TRAPPC4-207ENST00000526141 CLEC3AO75596 197 aa3.77□□□□□ -1.81
TRAPPC4-207ENST00000526141 ZNF205O95201 554 aa3.77□□□□□ -1.81
TRAPPC4-207ENST00000526141 FAM163BP0C2L3 166 aa3.77□□□□□ -1.81
TRAPPC4-207ENST00000526141 CT47B1P0C2W7 299 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC4-207ENST00000526141 NAT2P11245 290 aa3.77□□□□□ -1.81
TRAPPC4-207ENST00000526141 CASP2P42575 452 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms