RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 TECPR2O15040 1411 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 STRCP1A6NGW2 1772 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 XRN1Q8IZH2 1706 aaKnown RBP6.03□□□□□ -1.44
USP48-211ENST00000526044 TRAV20A0A0B4J274 112 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 TCAF2A6NFQ2 919 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 NUDT19A8MXV4 375 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 PPP1R11O60927 126 aaPredicted RBP6.03□□□□□ -1.44
USP48-211ENST00000526044 FGFR1P11362 822 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 ATF3P18847 181 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 TACR1P25103 407 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 MAP4K2Q12851 820 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 IFRD2Q12894 506 aaPredicted RBP6.03□□□□□ -1.44
USP48-211ENST00000526044 KCNAB2Q13303 367 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 CBX2Q14781 532 aaPredicted RBP6.03□□□□□ -1.44
USP48-211ENST00000526044 INF2Q27J81 1249 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 PRSS53Q2L4Q9 553 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 SLC35F1Q5T1Q4 408 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 MBLAC2Q68D91 279 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 PPIL6Q8IXY8 311 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 TMEM145Q8NBT3 493 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 USP33Q8TEY7 942 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 UBXN4Q92575 508 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 PUS7Q96PZ0 661 aaKnown RBP6.03□□□□□ -1.44
USP48-211ENST00000526044 DEPDC7Q96QD5 511 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 MCOLN1Q9GZU1 580 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 ARHGEF4Q9NR80 690 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.03□□□□□ -1.44
USP48-211ENST00000526044 KLHL14Q9P2G3 628 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 GULP1Q9UBP9 304 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 RWDD3Q9Y3V2 267 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 QRICH2Q9H0J4 1663 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 CPS1P31327 1500 aa6.03□□□□□ -1.44
USP48-211ENST00000526044 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.02□□□□□ -1.45
USP48-211ENST00000526044 PTCH1Q13635 1447 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 NCOA3Q9Y6Q9 1424 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 TEX51A0A1B0GUA7 166 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 MYOCOSA0A1B0GUC4 107 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 ARNTLO00327 626 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 PRODHO43272 600 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 SRGAP3O43295 1099 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 DLX3O60479 287 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 CYBBP04839 570 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 LTBRP36941 435 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 SRSF3P84103 164 aaKnown RBP6.02□□□□□ -1.45
USP48-211ENST00000526044 SSRP1Q08945 709 aaKnown RBP6.02□□□□□ -1.45
USP48-211ENST00000526044 RASA3Q14644 834 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 TESK1Q15569 626 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 KCNA10Q16322 511 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 DENND5AQ6IQ26 1287 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 PAQR3Q6TCH7 311 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 NSMFQ6X4W1 530 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 CABP7Q86V35 215 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 CCDC103Q8IW40 242 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 C1orf159Q96HA4 380 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 SRPK1Q96SB4 655 aaKnown RBP6.02□□□□□ -1.45
USP48-211ENST00000526044 MTA3Q9BTC8 594 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 SIRT5Q9NXA8 310 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 SNTG2Q9NY99 539 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 PFDN2Q9UHV9 154 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 TMEFF2Q9UIK5 374 aaPredicted RBP6.02□□□□□ -1.45
USP48-211ENST00000526044 TIMM13Q9Y5L4 95 aaPredicted RBP6.02□□□□□ -1.45
USP48-211ENST00000526044 TMEM94Q12767 1356 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 SBNO2Q9Y2G9 1366 aa6.02□□□□□ -1.45
USP48-211ENST00000526044 NKTRP30414 1462 aaKnown RBP6.02□□□□□ -1.45
USP48-211ENST00000526044 NWD1Q149M9 1564 aa6.01□□□□□ -1.45
USP48-211ENST00000526044 LRRC7Q96NW7 1537 aa6.01□□□□□ -1.45
USP48-211ENST00000526044 FAM221BA6H8Z2 402 aa6.01□□□□□ -1.45
USP48-211ENST00000526044 MYO1BO43795 1136 aa6.01□□□□□ -1.45
USP48-211ENST00000526044 SEMA7AO75326 666 aa6.01□□□□□ -1.45
USP48-211ENST00000526044 FUCA1P04066 466 aa6.01□□□□□ -1.45
USP48-211ENST00000526044 DBHP09172 617 aa6.01□□□□□ -1.45
USP48-211ENST00000526044 PABPC1P11940 636 aaKnown RBP6.01□□□□□ -1.45
USP48-211ENST00000526044 VIPR1P32241 457 aa6.01□□□□□ -1.45
USP48-211ENST00000526044 MAPKAPK2P49137 400 aa6.01□□□□□ -1.45
USP48-211ENST00000526044 GTF2A2P52657 109 aa6.01□□□□□ -1.45
USP48-211ENST00000526044 RPL11P62913 178 aaKnown RBP6.01□□□□□ -1.45
USP48-211ENST00000526044 RPTNQ6XPR3 784 aa6.01□□□□□ -1.45
USP48-211ENST00000526044 DPF3Q92784 378 aa6.01□□□□□ -1.45
USP48-211ENST00000526044 KIF7Q2M1P5 1343 aa6□□□□□ -1.45
USP48-211ENST00000526044 WASHC2AQ641Q2 1341 aa6□□□□□ -1.45
USP48-211ENST00000526044 ETV2O00321 342 aaPredicted RBP6□□□□□ -1.45
USP48-211ENST00000526044 GLI4P10075 376 aa6□□□□□ -1.45
USP48-211ENST00000526044 CDK11BP21127 795 aaKnown RBP6□□□□□ -1.45
USP48-211ENST00000526044 GLDCP23378 1020 aa6□□□□□ -1.45
USP48-211ENST00000526044 DDX10Q13206 875 aaKnown RBP6□□□□□ -1.45
USP48-211ENST00000526044 ATG14Q6ZNE5 492 aa6□□□□□ -1.45
USP48-211ENST00000526044 ZBTB38Q8NAP3 1195 aaPredicted RBP6□□□□□ -1.45
USP48-211ENST00000526044 RCBTB1Q8NDN9 531 aa6□□□□□ -1.45
USP48-211ENST00000526044 OSBP2Q969R2 916 aa6□□□□□ -1.45
USP48-211ENST00000526044 IPO9Q96P70 1041 aaKnown RBP6□□□□□ -1.45
USP48-211ENST00000526044 OSBPL2Q9H1P3 480 aa6□□□□□ -1.45
USP48-211ENST00000526044 MARCH2Q9P0N8 246 aa6□□□□□ -1.45
USP48-211ENST00000526044 DBR1Q9UK59 544 aaKnown RBP6□□□□□ -1.45
USP48-211ENST00000526044 NPFFR2Q9Y5X5 522 aa6□□□□□ -1.45
USP48-211ENST00000526044 MSH6P52701 1360 aa6□□□□□ -1.45
USP48-211ENST00000526044 CCDC7Q96M83 1385 aa6□□□□□ -1.45
USP48-211ENST00000526044 DISP3Q9P2K9 1392 aa6□□□□□ -1.45
USP48-211ENST00000526044 KDM2BQ8NHM5 1336 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 XIRP1Q702N8 1843 aaKnown RBP5.99□□□□□ -1.45
USP48-211ENST00000526044 RGPD8O14715 1765 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms