RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 GPR19Q15760 415 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 B3GNT8Q7Z7M8 397 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 GGNQ86UU5 652 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 OSTM1Q86WC4 334 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 PANK1Q8TE04 598 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 SGPP1Q9BX95 441 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 SLKQ9H2G2 1235 aaPredicted RBP6.69□□□□□ -1.34
PCM1-219ENST00000523540 SAMD15Q9P1V8 674 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 DSEQ9UL01 958 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 SLC27A2O14975 620 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 ASGR2P07307 311 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 JAM2P57087 298 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 CRY1Q16526 586 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 TMEM177Q53S58 311 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 CDCA2Q69YH5 1023 aaPredicted RBP6.68□□□□□ -1.34
PCM1-219ENST00000523540 ARHGAP36Q6ZRI8 547 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 ZNF662Q6ZS27 426 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 DDX53Q86TM3 631 aaKnown RBP6.68□□□□□ -1.34
PCM1-219ENST00000523540 ALG3Q92685 438 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 TARS2Q9BW92 718 aaKnown RBP6.68□□□□□ -1.34
PCM1-219ENST00000523540 MTFR1LQ9H019 292 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 SMURF1Q9HCE7 757 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 MYOTQ9UBF9 498 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 ASH2LQ9UBL3 628 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 PCDHB4Q9Y5E5 795 aa6.68□□□□□ -1.34
PCM1-219ENST00000523540 GSG1L2A8MUP6 293 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 GLRX3O76003 335 aaKnown RBP6.67□□□□□ -1.34
PCM1-219ENST00000523540 JMJD7P0C870 316 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 PMLP29590 882 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 MASP1P48740 699 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 MECP2P51608 486 aaKnown RBP6.67□□□□□ -1.34
PCM1-219ENST00000523540 EPHB3P54753 998 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 EPHA5P54756 1037 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 HTRA3P83110 453 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 CACNB2Q08289 660 aaPredicted RBP6.67□□□□□ -1.34
PCM1-219ENST00000523540 TAF7LQ5H9L4 462 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 CNNM4Q6P4Q7 775 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 TRIM48Q8IWZ4 208 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 FAM126BQ8IXS8 530 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 RBM12BQ8IXT5 1001 aaKnown RBP6.67□□□□□ -1.34
PCM1-219ENST00000523540 TMEFF1Q8IYR6 380 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 CISD2Q8N5K1 135 aaKnown RBP6.67□□□□□ -1.34
PCM1-219ENST00000523540 ARRDC4Q8NCT1 418 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 CLEC4DQ8WXI8 215 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 TELO2Q9Y4R8 837 aa6.67□□□□□ -1.34
PCM1-219ENST00000523540 OTOL1A6NHN0 477 aaPredicted RBP6.66□□□□□ -1.34
PCM1-219ENST00000523540 M0R2C6 588 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 TRAF5O00463 557 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 MAN2B1O00754 1011 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 MYCLP1P12525 358 aaPredicted RBP6.66□□□□□ -1.34
PCM1-219ENST00000523540 FLT3P36888 993 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 TUSC3Q13454 348 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 CFAP100Q494V2 611 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 PIK3R6Q5UE93 754 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 ETV3LQ6ZN32 361 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 UBE2R2Q712K3 238 aaPredicted RBP6.66□□□□□ -1.34
PCM1-219ENST00000523540 PRRT2Q7Z6L0 340 aaPredicted RBP6.66□□□□□ -1.34
PCM1-219ENST00000523540 FAM129CQ86XR2 697 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 PTRH1Q86Y79 214 aaKnown RBP6.66□□□□□ -1.34
PCM1-219ENST00000523540 THNSL2Q86YJ6 484 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 FAM177A1Q8N128 213 aaPredicted RBP6.66□□□□□ -1.34
PCM1-219ENST00000523540 DACT3Q96B18 629 aaPredicted RBP6.66□□□□□ -1.34
PCM1-219ENST00000523540 WNK4Q96J92 1243 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 ORAI3Q9BRQ5 295 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 SRPK3Q9UPE1 567 aa6.66□□□□□ -1.34
PCM1-219ENST00000523540 BUB1BO60566 1050 aaPredicted RBP6.65□□□□□ -1.34
PCM1-219ENST00000523540 PDE8AO60658 829 aa6.65□□□□□ -1.34
PCM1-219ENST00000523540 LTFP02788 710 aa6.65□□□□□ -1.34
PCM1-219ENST00000523540 ATF2P15336 505 aa6.65□□□□□ -1.34
PCM1-219ENST00000523540 KRT15P19012 456 aa6.65□□□□□ -1.34
PCM1-219ENST00000523540 NCKAP1LP55160 1127 aa6.65□□□□□ -1.34
PCM1-219ENST00000523540 PCBP1Q15365 356 aaKnown RBP eCLIP6.65□□□□□ -1.34
PCM1-219ENST00000523540 HHIPL2Q6UWX4 724 aa6.65□□□□□ -1.34
PCM1-219ENST00000523540 KCTD1Q719H9 257 aa6.65□□□□□ -1.34
PCM1-219ENST00000523540 ZC3H18Q86VM9 953 aaKnown RBP6.65□□□□□ -1.34
PCM1-219ENST00000523540 PPM1KQ8N3J5 372 aa6.65□□□□□ -1.34
PCM1-219ENST00000523540 CD244Q9BZW8 370 aa6.65□□□□□ -1.34
PCM1-219ENST00000523540 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.65□□□□□ -1.34
PCM1-219ENST00000523540 PRKAB1Q9Y478 270 aa6.65□□□□□ -1.34
PCM1-219ENST00000523540 CBX4O00257 560 aa6.64□□□□□ -1.35
PCM1-219ENST00000523540 KPNA6O60684 536 aa6.64□□□□□ -1.35
PCM1-219ENST00000523540 PI3P19957 117 aa6.64□□□□□ -1.35
PCM1-219ENST00000523540 NEK4P51957 841 aa6.64□□□□□ -1.35
PCM1-219ENST00000523540 FIGNQ5HY92 759 aa6.64□□□□□ -1.35
PCM1-219ENST00000523540 OTOP1Q7RTM1 612 aa6.64□□□□□ -1.35
PCM1-219ENST00000523540 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.64□□□□□ -1.35
PCM1-219ENST00000523540 NLGN4XQ8N0W4 816 aa6.64□□□□□ -1.35
PCM1-219ENST00000523540 LINC00482Q8N8I6 264 aa6.64□□□□□ -1.35
PCM1-219ENST00000523540 EPB41L4AQ9HCS5 686 aaPredicted RBP6.64□□□□□ -1.35
PCM1-219ENST00000523540 MAPRE3Q9UPY8 281 aa6.64□□□□□ -1.35
PCM1-219ENST00000523540 KCNK3O14649 394 aa6.63□□□□□ -1.35
PCM1-219ENST00000523540 SASH1O94885 1247 aa6.63□□□□□ -1.35
PCM1-219ENST00000523540 CELA3BP08861 270 aa6.63□□□□□ -1.35
PCM1-219ENST00000523540 VIL1P09327 827 aaKnown RBP6.63□□□□□ -1.35
PCM1-219ENST00000523540 ZBTB48P10074 688 aaPredicted RBP6.63□□□□□ -1.35
PCM1-219ENST00000523540 MC3RP41968 323 aa6.63□□□□□ -1.35
PCM1-219ENST00000523540 GRIN1Q05586 938 aa6.63□□□□□ -1.35
PCM1-219ENST00000523540 FSTL4Q6MZW2 842 aa6.63□□□□□ -1.35
PCM1-219ENST00000523540 RNF180Q86T96 592 aa6.63□□□□□ -1.35
PCM1-219ENST00000523540 KIF18BQ86Y91 864 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms