RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 TIGD5Q53EQ6 642 aa17.63■□□□□ 0.41
TRAPPC9-213ENST00000522504 PABPC5Q96DU9 382 aaKnown RBP17.63■□□□□ 0.41
TRAPPC9-213ENST00000522504 MYL10Q9BUA6 226 aa17.63■□□□□ 0.41
TRAPPC9-213ENST00000522504 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC9-213ENST00000522504 COL4A6Q14031 1691 aa17.63■□□□□ 0.41
TRAPPC9-213ENST00000522504 DOCK5Q9H7D0 1870 aa17.63■□□□□ 0.41
TRAPPC9-213ENST00000522504 ATP9AO75110 1047 aa17.62■□□□□ 0.41
TRAPPC9-213ENST00000522504 GHRP10912 638 aa17.62■□□□□ 0.41
TRAPPC9-213ENST00000522504 GNAT1P11488 350 aa17.62■□□□□ 0.41
TRAPPC9-213ENST00000522504 CHMLP26374 656 aa17.62■□□□□ 0.41
TRAPPC9-213ENST00000522504 LTBRP36941 435 aa17.62■□□□□ 0.41
TRAPPC9-213ENST00000522504 PCNX4Q63HM2 1172 aa17.62■□□□□ 0.41
TRAPPC9-213ENST00000522504 EHMT1Q9H9B1 1298 aa17.62■□□□□ 0.41
TRAPPC9-213ENST00000522504 ERICH2A1L162 156 aa17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 MGAT3Q09327 533 aa17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 LPIN1Q14693 890 aa17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 EP400NLQ6ZTU2 488 aa17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 CATIPQ7Z7H3 387 aa17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 RALYLQ86SE5 291 aaKnown RBP17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 MB21D2Q8IYB1 491 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 NCOA7Q8NI08 942 aa17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 APBB2Q92870 758 aa17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 ZBTB10Q96DT7 871 aa17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 IL17RAQ96F46 866 aa17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 SENP7Q9BQF6 1050 aa17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 NSUN3Q9H649 340 aaKnown RBP17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 RC3H2Q9HBD1 1191 aaKnown RBP17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 ZNF215Q9UL58 517 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC9-213ENST00000522504 GSTTP1A0A1W2PQM5 241 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 POTEB3A0JP26 581 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 PRR33A8MZF0 331 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 PIK3CDO00329 1044 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 GRM6O15303 877 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 PLEKHA8P1O95397 391 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 KCNA2P16389 499 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 ITGB5P18084 799 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 CTNNB1P35222 781 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 ZP2Q05996 745 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 DLX2Q07687 328 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 PUS10Q3MIT2 529 aaKnown RBP17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 MARCH8Q5T0T0 291 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 POTEBQ6S5H4 581 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 RPAINQ86UA6 219 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 SMARCC2Q8TAQ2 1214 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 SPZ1Q9BXG8 430 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 LY9Q9HBG7 655 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 NRCAMQ92823 1304 aa17.6■□□□□ 0.41
TRAPPC9-213ENST00000522504 C5orf67F2Z3F1 127 aa17.59■□□□□ 0.41
TRAPPC9-213ENST00000522504 ENPP3O14638 875 aa17.59■□□□□ 0.41
TRAPPC9-213ENST00000522504 MARK3P27448 753 aa17.59■□□□□ 0.41
TRAPPC9-213ENST00000522504 GTF2F1P35269 517 aaKnown RBP eCLIP17.59■□□□□ 0.412e-7■■■■■ 33.7
TRAPPC9-213ENST00000522504 TCF7P36402 384 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC9-213ENST00000522504 BMPR1AP36894 532 aa17.59■□□□□ 0.41
TRAPPC9-213ENST00000522504 XRRA1Q6P2D8 792 aa17.59■□□□□ 0.41
TRAPPC9-213ENST00000522504 ZNF654Q8IZM8 581 aa17.59■□□□□ 0.41
TRAPPC9-213ENST00000522504 CMTR1Q8N1G2 835 aaKnown RBP17.59■□□□□ 0.41
TRAPPC9-213ENST00000522504 FIBCD1Q8N539 461 aa17.59■□□□□ 0.41
TRAPPC9-213ENST00000522504 SRBD1Q8N5C6 995 aaKnown RBP17.59■□□□□ 0.41
TRAPPC9-213ENST00000522504 RRP36Q96EU6 259 aaKnown RBP17.59■□□□□ 0.41
TRAPPC9-213ENST00000522504 CLDND1Q9NY35 253 aa17.59■□□□□ 0.41
TRAPPC9-213ENST00000522504 SGSM2O43147 1006 aa17.58■□□□□ 0.4
TRAPPC9-213ENST00000522504 HYAL1Q12794 435 aa17.58■□□□□ 0.4
TRAPPC9-213ENST00000522504 PPFIA1Q13136 1202 aa17.58■□□□□ 0.4
TRAPPC9-213ENST00000522504 SART3Q15020 963 aaKnown RBP17.58■□□□□ 0.4
TRAPPC9-213ENST00000522504 CLUL1Q15846 466 aa17.58■□□□□ 0.4
TRAPPC9-213ENST00000522504 GRIK4Q16099 956 aa17.58■□□□□ 0.4
TRAPPC9-213ENST00000522504 CTC1Q2NKJ3 1217 aa17.58■□□□□ 0.4
TRAPPC9-213ENST00000522504 DNAJB3Q8WWF6 145 aa17.58■□□□□ 0.4
TRAPPC9-213ENST00000522504 LINC01599Q8WXQ3 324 aa17.58■□□□□ 0.4
TRAPPC9-213ENST00000522504 AGO3Q9H9G7 860 aaKnown RBP17.58■□□□□ 0.4
TRAPPC9-213ENST00000522504 PKD2L1Q9P0L9 805 aa17.58■□□□□ 0.4
TRAPPC9-213ENST00000522504 ADGRA3Q8IWK6 1321 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 hCG_1642624A0A1W2PR95 340 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 MBLAC1A4D2B0 266 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 C19orf67A6NJJ6 358 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 CSPG5O95196 566 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 ALADP13716 330 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 CAMK1Q14012 370 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 UBE2SQ16763 222 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 FBXO47Q5MNV8 452 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 TAF2Q6P1X5 1199 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 NLRX1Q86UT6 975 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 MAP4K1Q92918 833 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 CLP1Q92989 425 aaKnown RBP17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 CUL5Q93034 780 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 ZNF689Q96CS4 500 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 GPRASP2Q96D09 838 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 UIMC1Q96RL1 719 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 PCYT2Q99447 389 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 MAP3K14Q99558 947 aa17.57■□□□□ 0.4
TRAPPC9-213ENST00000522504 NLRC5Q86WI3 1866 aa17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 DCXO43602 365 aa17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 DDAH1O94760 285 aa17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 RB1P06400 928 aa17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 RXRAP19793 462 aa17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 RTN4RL1Q86UN2 441 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 CRIPAKQ8N1N5 446 aa17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 CTCFLQ8NI51 663 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 RUFY2Q8WXA3 655 aa17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 SEPT1Q8WYJ6 367 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms