RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 GPR3P46089 330 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 ODF1Q14990 250 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 MINDY4Q4G0A6 757 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 CC2D1AQ6P1N0 951 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 SLC4A10Q6U841 1118 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 FRMD7Q6ZUT3 714 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 CMIPQ8IY22 773 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 AMOTL1Q8IY63 956 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 ZZZ3Q8IYH5 903 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 CMTR2Q8IYT2 770 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 UHMK1Q8TAS1 419 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 LINC01599Q8WXQ3 324 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 MS4A5Q9H3V2 200 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 ZMAT4Q9H898 229 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 PIM2Q9P1W9 311 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 STK17AQ9UEE5 414 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 DSEQ9UL01 958 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 PCDHGA9Q9Y5G4 932 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 PCDHGA8Q9Y5G5 932 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 PCDHGA7Q9Y5G6 932 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 PCDHGA6Q9Y5G7 932 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 PCDHGA3Q9Y5H0 932 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 PCDHGA2Q9Y5H1 932 aa6.53□□□□□ -1.36
CTNNA1-233ENST00000522052 KLHL33A6NCF5 533 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 KRIT1O00522 736 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 H2AFYO75367 372 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 LTFP02788 710 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 FOSL1P15407 271 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 CD40P25942 277 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 PTX3P26022 381 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 PRKCQQ04759 706 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 DUSP4Q13115 394 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 GTF2H3Q13889 308 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 AOC3Q16853 763 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 CPZQ66K79 652 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 PPP4R4Q6NUP7 873 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 KSR2Q6VAB6 950 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 SMC5Q8IY18 1101 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 LZTR1Q8N653 840 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 CLIP3Q96DZ5 547 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 HSPBAP1Q96EW2 488 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 NUP88Q99567 741 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 ZNF700Q9H0M5 742 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 SP110Q9HB58 689 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 PRDM11Q9NQV5 511 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 VAV3Q9UKW4 847 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 ATP23Q9Y6H3 246 aa6.52□□□□□ -1.37
CTNNA1-233ENST00000522052 PRR19A6NJB7 356 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 XPOTO43592 962 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 KDM1AO60341 852 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 EIF3JO75822 258 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 H2AFB1P0C5Y9 115 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 H2AFB2P0C5Z0 115 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 PDCD1Q15116 288 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 EMC4Q5J8M3 183 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 EFCAB2Q5VUJ9 269 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 CYP4F22Q6NT55 531 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 ESRP1Q6NXG1 681 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 SLC51AQ86UW1 340 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 ZDHHC13Q8IUH4 622 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 USP33Q8TEY7 942 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 ASIC4Q96FT7 647 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 SLC39A13Q96H72 371 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 AIFM3Q96NN9 605 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 ORAI2Q96SN7 254 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 CD244Q9BZW8 370 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 KCNH7Q9NS40 1196 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 EBF1Q9UH73 591 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 ZBTB21Q9ULJ3 1066 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 NUB1Q9Y5A7 615 aa6.51□□□□□ -1.37
CTNNA1-233ENST00000522052 IL33O95760 270 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 LPOP22079 712 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 EPHA5P54756 1037 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 RTP1P59025 263 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 HTRA3P83110 453 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 IKZF1Q13422 519 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 OS9Q13438 667 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 CHRNA2Q15822 529 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 CLUL1Q15846 466 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 HSF5Q4G112 596 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 SYCP2LQ5T4T6 812 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 KCTD1Q719H9 257 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 EPM2AIP1Q7L775 607 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 SAMD3Q8N6K7 520 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 MISP3Q96FF7 219 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 ACAP3Q96P50 834 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 CARS2Q9HA77 564 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 CHST12Q9NRB3 414 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 CCM2LQ9NUG4 571 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 LMCD1Q9NZU5 365 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 FBLN5Q9UBX5 448 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 INVSQ9Y283 1065 aa6.5□□□□□ -1.37
CTNNA1-233ENST00000522052 A0A1W2PQ27 194 aa6.49□□□□□ -1.37
CTNNA1-233ENST00000522052 A0A1W2PQ64 194 aa6.49□□□□□ -1.37
CTNNA1-233ENST00000522052 A0A1W2PQC6 194 aa6.49□□□□□ -1.37
CTNNA1-233ENST00000522052 A0A1W2PQD8 194 aa6.49□□□□□ -1.37
CTNNA1-233ENST00000522052 LCHNA4D1U4 455 aa6.49□□□□□ -1.37
CTNNA1-233ENST00000522052 FAM181BA6NEQ2 426 aa6.49□□□□□ -1.37
CTNNA1-233ENST00000522052 ERC2O15083 957 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms