RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
CTNNA1-233ENST00000522052 AEBP2Q6ZN18 517 aaPredicted RBP19.5■□□□□ 0.71
CTNNA1-233ENST00000522052 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
CTNNA1-233ENST00000522052 SENP3Q9H4L4 574 aaPredicted RBP16.46■□□□□ 0.23
CTNNA1-233ENST00000522052 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.2
CTNNA1-233ENST00000522052 ADRA2BP18089 450 aa15.2■□□□□ 0.02
CTNNA1-233ENST00000522052 FOXD1Q16676 465 aa15.19■□□□□ 0.02
CTNNA1-233ENST00000522052 PPP6R1Q9UPN7 881 aa15.12■□□□□ 0.01
CTNNA1-233ENST00000522052 KCNA4P22459 653 aa14.8□□□□□ -0.04
CTNNA1-233ENST00000522052 EHMT2Q96KQ7 1210 aa14.52□□□□□ -0.09
CTNNA1-233ENST00000522052 PIAS4Q8N2W9 510 aaPredicted RBP14.48□□□□□ -0.09
CTNNA1-233ENST00000522052 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
CTNNA1-233ENST00000522052 NCBP3Q53F19 620 aaKnown RBP14.22□□□□□ -0.13
CTNNA1-233ENST00000522052 SLC4A1APQ9BWU0 796 aaKnown RBP14.21□□□□□ -0.13
CTNNA1-233ENST00000522052 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
CTNNA1-233ENST00000522052 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
CTNNA1-233ENST00000522052 POTEDQ86YR6 584 aa13.97□□□□□ -0.17
CTNNA1-233ENST00000522052 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
CTNNA1-233ENST00000522052 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
CTNNA1-233ENST00000522052 MSH5O43196 834 aa13.77□□□□□ -0.21
CTNNA1-233ENST00000522052 ZBTB22O15209 634 aa13.63□□□□□ -0.23
CTNNA1-233ENST00000522052 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
CTNNA1-233ENST00000522052 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-233ENST00000522052 RNF216Q9NWF9 866 aaPredicted RBP13.45□□□□□ -0.26
CTNNA1-233ENST00000522052 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
CTNNA1-233ENST00000522052 DMRT2Q9Y5R5 561 aa13.25□□□□□ -0.29
CTNNA1-233ENST00000522052 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
CTNNA1-233ENST00000522052 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
CTNNA1-233ENST00000522052 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-233ENST00000522052 ATXN8OSP0DMR3 200 aa12.94□□□□□ -0.34
CTNNA1-233ENST00000522052 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
CTNNA1-233ENST00000522052 FKBP8Q14318 412 aa12.68□□□□□ -0.38
CTNNA1-233ENST00000522052 RTN4Q9NQC3 1192 aaKnown RBP12.68□□□□□ -0.38
CTNNA1-233ENST00000522052 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
CTNNA1-233ENST00000522052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.49e-8■□□□□ 9.6
CTNNA1-233ENST00000522052 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
CTNNA1-233ENST00000522052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-233ENST00000522052 HNRNPUL2Q1KMD3 747 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-233ENST00000522052 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
CTNNA1-233ENST00000522052 SLC24A1O60721 1099 aa12.49□□□□□ -0.41
CTNNA1-233ENST00000522052 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
CTNNA1-233ENST00000522052 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
CTNNA1-233ENST00000522052 APLP2Q06481 763 aa12.25□□□□□ -0.45
CTNNA1-233ENST00000522052 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
CTNNA1-233ENST00000522052 FBXO3Q9UK99 471 aa12.07□□□□□ -0.48
CTNNA1-233ENST00000522052 MKRN4PQ13434 485 aaPredicted RBP12.03□□□□□ -0.48
CTNNA1-233ENST00000522052 PROM2Q8N271 834 aa11.98□□□□□ -0.49
CTNNA1-233ENST00000522052 FBLN2P98095 1184 aa11.97□□□□□ -0.49
CTNNA1-233ENST00000522052 CACNB1Q02641 598 aaPredicted RBP11.96□□□□□ -0.49
CTNNA1-233ENST00000522052 TRHP20396 242 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-233ENST00000522052 SPINK5Q9NQ38 1064 aaPredicted RBP11.91□□□□□ -0.5
CTNNA1-233ENST00000522052 POLA2Q14181 598 aa11.89□□□□□ -0.51
CTNNA1-233ENST00000522052 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-233ENST00000522052 RNF39Q9H2S5 420 aa11.85□□□□□ -0.51
CTNNA1-233ENST00000522052 CAPN15O75808 1086 aa11.83□□□□□ -0.52
CTNNA1-233ENST00000522052 IFNLR1Q8IU57 520 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-233ENST00000522052 ZBTB12Q9Y330 459 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-233ENST00000522052 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
CTNNA1-233ENST00000522052 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
CTNNA1-233ENST00000522052 ABCB7O75027 752 aa11.66□□□□□ -0.54
CTNNA1-233ENST00000522052 PKD2Q13563 968 aa11.63□□□□□ -0.55
CTNNA1-233ENST00000522052 DCAF8L2P0C7V8 631 aa11.6□□□□□ -0.55
CTNNA1-233ENST00000522052 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
CTNNA1-233ENST00000522052 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
CTNNA1-233ENST00000522052 HAP1P54257 671 aaPredicted RBP11.52□□□□□ -0.57
CTNNA1-233ENST00000522052 KLHL34Q8N239 644 aa11.52□□□□□ -0.57
CTNNA1-233ENST00000522052 STAG3Q9UJ98 1225 aa11.52□□□□□ -0.57
CTNNA1-233ENST00000522052 DSG3P32926 999 aa11.5□□□□□ -0.57
CTNNA1-233ENST00000522052 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
CTNNA1-233ENST00000522052 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
CTNNA1-233ENST00000522052 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
CTNNA1-233ENST00000522052 SSUH2Q9Y2M2 353 aa11.47□□□□□ -0.57
CTNNA1-233ENST00000522052 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
CTNNA1-233ENST00000522052 ECM2O94769 699 aaPredicted RBP11.43□□□□□ -0.58
CTNNA1-233ENST00000522052 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
CTNNA1-233ENST00000522052 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
CTNNA1-233ENST00000522052 VSIG10Q8N0Z9 540 aa11.39□□□□□ -0.59
CTNNA1-233ENST00000522052 BBXQ8WY36 941 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-233ENST00000522052 MIER1Q8N108 512 aa11.37□□□□□ -0.59
CTNNA1-233ENST00000522052 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-233ENST00000522052 NPM1P06748 294 aaKnown RBP eCLIP11.32□□□□□ -0.6
CTNNA1-233ENST00000522052 BCANQ96GW7 911 aa11.32□□□□□ -0.6
CTNNA1-233ENST00000522052 RGL2O15211 777 aa11.3□□□□□ -0.6
CTNNA1-233ENST00000522052 PAXIP1Q6ZW49 1069 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-233ENST00000522052 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-233ENST00000522052 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
CTNNA1-233ENST00000522052 CFAP44Q96MT7 982 aa11.24□□□□□ -0.61
CTNNA1-233ENST00000522052 CIZ1Q9ULV3 898 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-233ENST00000522052 KDM2AQ9Y2K7 1162 aa11.2□□□□□ -0.62
CTNNA1-233ENST00000522052 SPRYD3Q8NCJ5 442 aa11.19□□□□□ -0.62
CTNNA1-233ENST00000522052 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
CTNNA1-233ENST00000522052 TAOK2Q9UL54 1235 aa11.15□□□□□ -0.62
CTNNA1-233ENST00000522052 CHGAP10645 457 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-233ENST00000522052 PRKCSHP14314 528 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-233ENST00000522052 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
CTNNA1-233ENST00000522052 GSE1Q14687 1217 aa11.08□□□□□ -0.64
CTNNA1-233ENST00000522052 HS6ST3Q8IZP7 471 aa11.06□□□□□ -0.64
CTNNA1-233ENST00000522052 NUBP1P53384 320 aa11.03□□□□□ -0.64
CTNNA1-233ENST00000522052 DNAJC5Q9H3Z4 198 aa11.02□□□□□ -0.65
CTNNA1-233ENST00000522052 RNF25Q96BH1 459 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms