RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ARRDC4Q8NCT1 418 aa5.27□□□□□ -1.57
VPS13B-207ENST00000518569 MZB1Q8WU39 189 aa5.27□□□□□ -1.57
VPS13B-207ENST00000518569 CHAC2Q8WUX2 184 aa5.27□□□□□ -1.57
VPS13B-207ENST00000518569 CLEC4DQ8WXI8 215 aa5.27□□□□□ -1.57
VPS13B-207ENST00000518569 TOE1Q96GM8 510 aaKnown RBP5.27□□□□□ -1.57
VPS13B-207ENST00000518569 KPNA6O60684 536 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 DNAJC6O75061 913 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 F2P00734 622 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 TMEM253P0C7T8 217 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 FAHP16930 419 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 KRT15P19012 456 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 IGFBP6P24592 240 aaPredicted RBP5.26□□□□□ -1.57
VPS13B-207ENST00000518569 RAP1GAPP47736 663 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 PCBP1Q15365 356 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS13B-207ENST00000518569 FBLN7Q53RD9 439 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 SPOCD1Q6ZMY3 1216 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 SYDE1Q6ZW31 735 aaPredicted RBP5.26□□□□□ -1.57
VPS13B-207ENST00000518569 ZC3H18Q86VM9 953 aaKnown RBP5.26□□□□□ -1.57
VPS13B-207ENST00000518569 NOSTRINQ8IVI9 506 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 IGDCC3Q8IVU1 814 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 YIPF4Q9BSR8 244 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 BOCQ9BWV1 1114 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 CD244Q9BZW8 370 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 KCNK12Q9HB15 430 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 ZKSCAN5Q9Y2L8 839 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 TELO2Q9Y4R8 837 aa5.26□□□□□ -1.57
VPS13B-207ENST00000518569 ETV2O00321 342 aaPredicted RBP5.25□□□□□ -1.57
VPS13B-207ENST00000518569 BUB1BO60566 1050 aaPredicted RBP5.25□□□□□ -1.57
VPS13B-207ENST00000518569 LRG1P02750 347 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 ZBTB48P10074 688 aaPredicted RBP5.25□□□□□ -1.57
VPS13B-207ENST00000518569 PTPN1P18031 435 aaKnown RBP5.25□□□□□ -1.57
VPS13B-207ENST00000518569 NKX3-2P78367 333 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 DHCR24Q15392 516 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 PAN2Q504Q3 1202 aaKnown RBP5.25□□□□□ -1.57
VPS13B-207ENST00000518569 BTBD8Q5XKL5 378 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 PKN3Q6P5Z2 889 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 DDX46Q7L014 1031 aaKnown RBP5.25□□□□□ -1.57
VPS13B-207ENST00000518569 FILIP1Q7Z7B0 1213 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 B3GNT8Q7Z7M8 397 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 OR2W6PQ8NHA6 318 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 DLG3Q92796 817 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 TOX2Q96NM4 488 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 BCAS3Q9H6U6 928 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 IFT57Q9NWB7 429 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 PLA2G2DQ9UNK4 145 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 B3GALT1Q9Y5Z6 326 aa5.25□□□□□ -1.57
VPS13B-207ENST00000518569 PTPDC1A2A3K4 754 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 FAM90A27PA6NNH2 459 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 NFIBO00712 420 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 GAS7O60861 476 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 HIP1RO75146 1068 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 LTFP02788 710 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 ATF2P15336 505 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 SCNN1BP51168 640 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 EPHB3P54753 998 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 HERVK_113P62684 666 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 IRF9Q00978 393 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 DSG1Q02413 1049 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 SEPT7Q16181 437 aaKnown RBP5.24□□□□□ -1.57
VPS13B-207ENST00000518569 CR1LQ2VPA4 569 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 CC2D1AQ6P1N0 951 aaPredicted RBP5.24□□□□□ -1.57
VPS13B-207ENST00000518569 TEPPQ6URK8 271 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 RBM12BQ8IXT5 1001 aaKnown RBP5.24□□□□□ -1.57
VPS13B-207ENST00000518569 ZSCAN18Q8TBC5 510 aaPredicted RBP5.24□□□□□ -1.57
VPS13B-207ENST00000518569 DDX11Q96FC9 970 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 SIGLEC10Q96LC7 697 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 SGPP1Q9BX95 441 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 KCNH7Q9NS40 1196 aa5.24□□□□□ -1.57
VPS13B-207ENST00000518569 ANKRD62A6NC57 917 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 H7C1D1 291 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 ACOT7O00154 380 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 TSPAN15O95858 294 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 KRT1P04264 644 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 C8BP07358 591 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 CYP2C8P10632 490 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 CPEP16870 476 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 SDHAP31040 664 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 NCKAP1LP55160 1127 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 FOXO4P98177 505 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 CAP1Q01518 475 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 GRIN1Q05586 938 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 CD300LDQ6UXZ3 194 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 AFAP1L2Q8N4X5 818 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 LEO1Q8WVC0 666 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-207ENST00000518569 SCYL1Q96KG9 808 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 BRINP2Q9C0B6 783 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS13B-207ENST00000518569 ACSS2Q9NR19 701 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 RIC8BQ9NVN3 520 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 FAN1Q9Y2M0 1017 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 IRAK3Q9Y616 596 aa5.23□□□□□ -1.57
VPS13B-207ENST00000518569 TCAF2A6NFQ2 919 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 SCDO00767 359 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 KCNK3O14649 394 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 ZEB2O60315 1214 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 C4BPAP04003 597 aaKnown RBP5.22□□□□□ -1.57
VPS13B-207ENST00000518569 ATP2A2P16615 1042 aaKnown RBP5.22□□□□□ -1.57
VPS13B-207ENST00000518569 BPIP17213 487 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 MC3RP41968 323 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 STAT5AP42229 794 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms