RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 ACTR2P61160 394 aa15.88■□□□□ 0.13
DDX41-212ENST00000511040 INF2Q27J81 1249 aa15.88■□□□□ 0.13
DDX41-212ENST00000511040 FAM177A1Q8N128 213 aaPredicted RBP15.88■□□□□ 0.13
DDX41-212ENST00000511040 SCLYQ96I15 445 aa15.88■□□□□ 0.13
DDX41-212ENST00000511040 ZNF577Q9BSK1 485 aa15.88■□□□□ 0.13
DDX41-212ENST00000511040 BACH2Q9BYV9 841 aa15.88■□□□□ 0.13
DDX41-212ENST00000511040 WNT8AQ9H1J5 351 aa15.88■□□□□ 0.13
DDX41-212ENST00000511040 NFASCO94856 1347 aa15.88■□□□□ 0.13
DDX41-212ENST00000511040 CCDC194A0A1B0GVG4 234 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 A0A1W2PPC1 479 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 IPO5O00410 1097 aaKnown RBP15.87■□□□□ 0.13
DDX41-212ENST00000511040 SOX1O00570 391 aaPredicted RBP15.87■□□□□ 0.13
DDX41-212ENST00000511040 ST18O60284 1047 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 CD2BP2O95400 341 aaKnown RBP15.87■□□□□ 0.13
DDX41-212ENST00000511040 TDP2O95551 362 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 CCNE2O96020 404 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 ACRP10323 421 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 CIITAP33076 1130 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 FXR1P51114 621 aaKnown RBP eCLIP15.87■□□□□ 0.13
DDX41-212ENST00000511040 NONOQ15233 471 aaKnown RBP eCLIP15.87■□□□□ 0.13
DDX41-212ENST00000511040 KRT25Q7Z3Z0 450 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 TMEM199Q8N511 208 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 DHX38Q92620 1227 aaKnown RBP15.87■□□□□ 0.13
DDX41-212ENST00000511040 GLG1Q92896 1179 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 GJA10Q969M2 543 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 LENG9Q96B70 501 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 PCYT2Q99447 389 aa15.87■□□□□ 0.13
DDX41-212ENST00000511040 SH2B1Q9NRF2 756 aaPredicted RBP15.87■□□□□ 0.13
DDX41-212ENST00000511040 ZNF215Q9UL58 517 aaPredicted RBP15.87■□□□□ 0.13
DDX41-212ENST00000511040 FAM205CA6NFA0 338 aa15.86■□□□□ 0.13
DDX41-212ENST00000511040 DHX15O43143 795 aaKnown RBP15.86■□□□□ 0.13
DDX41-212ENST00000511040 USP11P51784 963 aa15.86■□□□□ 0.13
DDX41-212ENST00000511040 SETQ01105 290 aaPredicted RBP15.86■□□□□ 0.13
DDX41-212ENST00000511040 GUCY1B3Q02153 619 aa15.86■□□□□ 0.13
DDX41-212ENST00000511040 NR5A1Q13285 461 aa15.86■□□□□ 0.13
DDX41-212ENST00000511040 PPIGQ13427 754 aaKnown RBP eCLIP15.86■□□□□ 0.132e-8■■■■□ 19.7
DDX41-212ENST00000511040 PIK3AP1Q6ZUJ8 805 aa15.86■□□□□ 0.13
DDX41-212ENST00000511040 WNT8BQ93098 351 aa15.86■□□□□ 0.13
DDX41-212ENST00000511040 RNPEPQ9H4A4 650 aa15.86■□□□□ 0.13
DDX41-212ENST00000511040 SETD4Q9NVD3 440 aa15.86■□□□□ 0.13
DDX41-212ENST00000511040 TRIP12Q14669 1992 aaPredicted RBP15.86■□□□□ 0.13
DDX41-212ENST00000511040 RANBP2P49792 3224 aaKnown RBP15.85■□□□□ 0.13
DDX41-212ENST00000511040 C17orf102A2RUQ5 167 aa15.85■□□□□ 0.13
DDX41-212ENST00000511040 MSH4O15457 936 aa15.85■□□□□ 0.13
DDX41-212ENST00000511040 KRT2P35908 639 aa15.85■□□□□ 0.13
DDX41-212ENST00000511040 TRIM29Q14134 588 aa15.85■□□□□ 0.13
DDX41-212ENST00000511040 LETM2Q2VYF4 491 aa15.85■□□□□ 0.13
DDX41-212ENST00000511040 EARS2Q5JPH6 523 aaKnown RBP15.85■□□□□ 0.13
DDX41-212ENST00000511040 KRT40Q6A162 431 aa15.85■□□□□ 0.13
DDX41-212ENST00000511040 C16orf59Q7L2K0 433 aa15.85■□□□□ 0.13
DDX41-212ENST00000511040 RETREG2Q8NC44 543 aa15.85■□□□□ 0.13
DDX41-212ENST00000511040 LLPHQ9BRT6 129 aaKnown RBP15.85■□□□□ 0.13
DDX41-212ENST00000511040 SMARCAD1Q9H4L7 1026 aa15.85■□□□□ 0.13
DDX41-212ENST00000511040 TREHO43280 583 aa15.84■□□□□ 0.13
DDX41-212ENST00000511040 LGR5O75473 907 aa15.84■□□□□ 0.13
DDX41-212ENST00000511040 BFSP2Q13515 415 aa15.84■□□□□ 0.13
DDX41-212ENST00000511040 DEFB128Q7Z7B8 93 aa15.84■□□□□ 0.13
DDX41-212ENST00000511040 ATP6V0A1Q93050 837 aa15.84■□□□□ 0.13
DDX41-212ENST00000511040 LRCH3Q96II8 777 aa15.84■□□□□ 0.13
DDX41-212ENST00000511040 RNPC3Q96LT9 517 aaKnown RBP15.84■□□□□ 0.13
DDX41-212ENST00000511040 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.84■□□□□ 0.135e-9■■□□□ 14.4
DDX41-212ENST00000511040 AZI2Q9H6S1 392 aa15.84■□□□□ 0.13
DDX41-212ENST00000511040 BRMS1Q9HCU9 246 aa15.84■□□□□ 0.13
DDX41-212ENST00000511040 IL23AQ9NPF7 189 aa15.84■□□□□ 0.13
DDX41-212ENST00000511040 ERAP1Q9NZ08 941 aa15.84■□□□□ 0.13
DDX41-212ENST00000511040 BTBD18B2RXH4 712 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 BACH1O14867 736 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 SLC37A4O43826 429 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 MMP1P03956 469 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 IQCF3P0C7M6 154 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 IGBP1P78318 339 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 PPFIA1Q13136 1202 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 PTK7Q13308 1070 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 TMEM240Q5SV17 173 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 ZNF365Q70YC5 407 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 NEK8Q86SG6 692 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 DIS3L2Q8IYB7 885 aaKnown RBP15.83■□□□□ 0.12
DDX41-212ENST00000511040 LMBR1Q8WVP7 490 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 TNFRSF25Q93038 417 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 TMX3Q96JJ7 454 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 C8orf76Q96K31 380 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 TBC1D22BQ9NU19 505 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 DDX25Q9UHL0 483 aaKnown RBP15.83■□□□□ 0.12
DDX41-212ENST00000511040 EMSYQ7Z589 1322 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 SCN5AQ14524 2016 aa15.83■□□□□ 0.12
DDX41-212ENST00000511040 CYP3A7-CYP3A51PA0A087WV96 503 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 PITPNM1O00562 1244 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 CHMP2AO43633 222 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 GAS7O60861 476 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 ATG7O95352 703 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 CKBP12277 381 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 CYP3A7P24462 503 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 HOXC8P31273 242 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 STAT5BP51692 787 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 TRIM71Q2Q1W2 868 aaKnown RBP15.82■□□□□ 0.12
DDX41-212ENST00000511040 Q4G0T1 1027 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 LRCH2Q5VUJ6 765 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 MIS18BP1Q6P0N0 1132 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 ABHD15Q6UXT9 468 aa15.82■□□□□ 0.12
DDX41-212ENST00000511040 SERINC5Q86VE9 423 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms