RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 COQ6Q9Y2Z9 468 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 TELO2Q9Y4R8 837 aa9.8□□□□□ -0.84
TRAPPC11-206ENST00000509857 ARAP1Q96P48 1450 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 RFXAPO00287 272 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 HSD3B2P26439 372 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 HTRA3P83110 453 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 CAP1Q01518 475 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 CRY1Q16526 586 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 CR1LQ2VPA4 569 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 ZNF385BQ569K4 471 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 FIGNQ5HY92 759 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 ZC3H18Q86VM9 953 aaKnown RBP9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 KRTAP19-1Q8IUB9 90 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 SMARCC2Q8TAQ2 1214 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 CLEC4DQ8WXI8 215 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 SMURF1Q9HCE7 757 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 FAN1Q9Y2M0 1017 aa9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 TNPO3Q9Y5L0 923 aaKnown RBP9.79□□□□□ -0.84
TRAPPC11-206ENST00000509857 ABCA5Q8WWZ7 1642 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 EFCAB5A4FU69 1503 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 MAN2B1O00754 1011 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 LRG1P02750 347 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 CYP2C8P10632 490 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 LIMS1P48059 325 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 DNM2P50570 870 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 DALRD3Q5D0E6 543 aaKnown RBP9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 ZCCHC8Q6NZY4 707 aaKnown RBP9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 HHIPL2Q6UWX4 724 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 OVCH1Q7RTY7 1134 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 OSTM1Q86WC4 334 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 NLGN4XQ8N0W4 816 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 FAM26EQ8N5C1 309 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 TOE1Q96GM8 510 aaKnown RBP9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 KRTAP9-2Q9BYQ4 174 aa9.78□□□□□ -0.84
TRAPPC11-206ENST00000509857 STAT5AP42229 794 aa9.77□□□□□ -0.85
TRAPPC11-206ENST00000509857 JAM2P57087 298 aa9.77□□□□□ -0.85
TRAPPC11-206ENST00000509857 ZNF460Q14592 562 aa9.77□□□□□ -0.85
TRAPPC11-206ENST00000509857 CNKSR3Q6P9H4 555 aa9.77□□□□□ -0.85
TRAPPC11-206ENST00000509857 IGSF22Q8N9C0 903 aa9.77□□□□□ -0.85
TRAPPC11-206ENST00000509857 DACT3Q96B18 629 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC11-206ENST00000509857 YIPF4Q9BSR8 244 aa9.77□□□□□ -0.85
TRAPPC11-206ENST00000509857 CD244Q9BZW8 370 aa9.77□□□□□ -0.85
TRAPPC11-206ENST00000509857 ARHGAP35Q9NRY4 1499 aa9.77□□□□□ -0.85
TRAPPC11-206ENST00000509857 FHAD1B1AJZ9 1412 aa9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 OPA1O60313 960 aa9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 LTFP02788 710 aa9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 PLA2G1BP04054 148 aaKnown RBP9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 TMEM177Q53S58 311 aa9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 TEPPQ6URK8 271 aa9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 CD300LDQ6UXZ3 194 aa9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 DDX53Q86TM3 631 aaKnown RBP9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 PTRH1Q86Y79 214 aaKnown RBP9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 C1QL4Q86Z23 238 aa9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 RBM12BQ8IXT5 1001 aaKnown RBP9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 NIM1KQ8IY84 436 aa9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 CISD2Q8N5K1 135 aaKnown RBP9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 LINC00482Q8N8I6 264 aa9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 TOX2Q96NM4 488 aa9.76□□□□□ -0.85
TRAPPC11-206ENST00000509857 KIF21AQ7Z4S6 1674 aa9.75□□□□□ -0.85
TRAPPC11-206ENST00000509857 MRC2Q9UBG0 1479 aa9.75□□□□□ -0.85
TRAPPC11-206ENST00000509857 YBX3P16989 372 aaKnown RBP eCLIP9.75□□□□□ -0.856e-6■□□□□ 10.9
TRAPPC11-206ENST00000509857 MECP2P51608 486 aaKnown RBP9.75□□□□□ -0.85
TRAPPC11-206ENST00000509857 NKX3-2P78367 333 aa9.75□□□□□ -0.85
TRAPPC11-206ENST00000509857 DDX11Q96FC9 970 aa9.75□□□□□ -0.85
TRAPPC11-206ENST00000509857 GORASP1Q9BQQ3 440 aa9.75□□□□□ -0.85
TRAPPC11-206ENST00000509857 PMF1-BGLAPU3KQ54 211 aa9.75□□□□□ -0.85
TRAPPC11-206ENST00000509857 RAD54L2Q9Y4B4 1467 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 FAM83GA6ND36 823 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 FAHP16930 419 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 KRT15P19012 456 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 POU3F2P20265 443 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 GJA4P35212 333 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 C21orf62-AS1Q17RA5 79 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 PAN2Q504Q3 1202 aaKnown RBP9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 CIAPIN1Q6FI81 312 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 FNIP1Q8TF40 1166 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 MFSD3Q96ES6 412 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 PWWP2AQ96N64 755 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 ORAI3Q9BRQ5 295 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 SAMD15Q9P1V8 674 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 ATP23Q9Y6H3 246 aa9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 TARBP1Q13395 1621 aaKnown RBP9.74□□□□□ -0.85
TRAPPC11-206ENST00000509857 AQRO60306 1485 aaKnown RBP eCLIP9.73□□□□□ -0.856e-6■■■■□ 25.1
TRAPPC11-206ENST00000509857 GAPVD1Q14C86 1478 aa9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 NUAK1O60285 661 aa9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 CLASP2O75122 1294 aaKnown RBP9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 GLRX3O76003 335 aaKnown RBP9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 CFPP27918 469 aa9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 FLT3P36888 993 aa9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 GRIN1Q05586 938 aa9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 TM4SF20Q53R12 229 aa9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 OTOP1Q7RTM1 612 aa9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 NOSTRINQ8IVI9 506 aa9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 TMEM151BQ8IW70 566 aa9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 LRRC56Q8IYG6 542 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 NOX5Q96PH1 765 aa9.73□□□□□ -0.85
TRAPPC11-206ENST00000509857 CTTNBP2Q8WZ74 1663 aa9.72□□□□□ -0.85
TRAPPC11-206ENST00000509857 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC11-206ENST00000509857 ACOT7O00154 380 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms