RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 TRIM61Q5EBN2 209 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 CD300LDQ6UXZ3 194 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 ADGRG2Q8IZP9 1017 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 GSTCDQ8NEC7 633 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 ZSWIM2Q8NEG5 633 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 PCDH19Q8TAB3 1148 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 UHMK1Q8TAS1 419 aaKnown RBP6.19□□□□□ -1.42
NFKB1-208ENST00000509165 CLEC4DQ8WXI8 215 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 IPO9Q96P70 1041 aaKnown RBP6.19□□□□□ -1.42
NFKB1-208ENST00000509165 KCNJ15Q99712 375 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 C11orf84Q9BUA3 381 aaPredicted RBP6.19□□□□□ -1.42
NFKB1-208ENST00000509165 SLC52A2Q9HAB3 445 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 PCDH18Q9HCL0 1135 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 WASF3Q9UPY6 502 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 TELO2Q9Y4R8 837 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 PTCH2Q9Y6C5 1203 aa6.19□□□□□ -1.42
NFKB1-208ENST00000509165 A0A1B0GTL3 188 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.18□□□□□ -1.42
NFKB1-208ENST00000509165 TCRBV5S4A2TA0A5A2 114 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 SLC27A2O14975 620 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 BMP7P18075 431 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 ITGA1P56199 1179 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 PAK1Q13153 545 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 CCDC144BQ3MJ40 725 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 TEPPQ6URK8 271 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 LIPIQ6XZB0 460 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 TTLL11Q8NHH1 800 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 SLC7A14Q8TBB6 771 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 SH3RF2Q8TEC5 729 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 ZBTB8AQ96BR9 441 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 ALG1Q9BT22 464 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 PCDHA8Q9Y5H6 950 aa6.18□□□□□ -1.42
NFKB1-208ENST00000509165 ABCA10Q8WWZ4 1543 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 CCDC163A0A0D9SF12 145 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 KCNQ2O43526 872 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 MAFKO60675 156 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 CRTAMO95727 393 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 GNAT1P11488 350 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 EPHA5P54756 1037 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 SPIRE1Q08AE8 756 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 ADAM9Q13443 819 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 ZC3H18Q86VM9 953 aaKnown RBP6.17□□□□□ -1.42
NFKB1-208ENST00000509165 PROSER1Q86XN7 944 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 RBM12BQ8IXT5 1001 aaKnown RBP6.17□□□□□ -1.42
NFKB1-208ENST00000509165 KYQ8NBH2 561 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 TOE1Q96GM8 510 aaKnown RBP6.17□□□□□ -1.42
NFKB1-208ENST00000509165 C20orf173Q96LM9 149 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 XYLT2Q9H1B5 865 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 PIF1Q9H611 641 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 ZSWIM4Q9H7M6 989 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 KANSL2Q9H9L4 492 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 PARD6AQ9NPB6 346 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 NGRNQ9NPE2 291 aaKnown RBP6.17□□□□□ -1.42
NFKB1-208ENST00000509165 LUC7LQ9NQ29 371 aaKnown RBP6.17□□□□□ -1.42
NFKB1-208ENST00000509165 PCDHA9Q9Y5H5 950 aa6.17□□□□□ -1.42
NFKB1-208ENST00000509165 LTFP02788 710 aa6.16□□□□□ -1.42
NFKB1-208ENST00000509165 THBS2P35442 1172 aa6.16□□□□□ -1.42
NFKB1-208ENST00000509165 SLURP1P55000 103 aa6.16□□□□□ -1.42
NFKB1-208ENST00000509165 NKX3-2P78367 333 aa6.16□□□□□ -1.42
NFKB1-208ENST00000509165 GUCY1A3Q02108 690 aa6.16□□□□□ -1.42
NFKB1-208ENST00000509165 TUSC3Q13454 348 aa6.16□□□□□ -1.42
NFKB1-208ENST00000509165 SMAD4Q13485 552 aaKnown RBP6.16□□□□□ -1.42
NFKB1-208ENST00000509165 SQSTM1Q13501 440 aa6.16□□□□□ -1.42
NFKB1-208ENST00000509165 PRR31Q5SQ13 230 aa6.16□□□□□ -1.42
NFKB1-208ENST00000509165 MTDHQ86UE4 582 aaKnown RBP6.16□□□□□ -1.42
NFKB1-208ENST00000509165 STK32CQ86UX6 486 aa6.16□□□□□ -1.42
NFKB1-208ENST00000509165 TRIM48Q8IWZ4 208 aa6.16□□□□□ -1.42
NFKB1-208ENST00000509165 SCLYQ96I15 445 aa6.16□□□□□ -1.42
NFKB1-208ENST00000509165 MRPL4Q9BYD3 311 aaKnown RBP6.16□□□□□ -1.42
NFKB1-208ENST00000509165 MADDQ8WXG6 1647 aa6.16□□□□□ -1.42
NFKB1-208ENST00000509165 RUSC2Q8N2Y8 1516 aa6.15□□□□□ -1.42
NFKB1-208ENST00000509165 CUL7Q14999 1698 aa6.15□□□□□ -1.42
NFKB1-208ENST00000509165 NAT1P18440 290 aa6.15□□□□□ -1.42
NFKB1-208ENST00000509165 HOXA5P20719 270 aa6.15□□□□□ -1.42
NFKB1-208ENST00000509165 RTP5Q14D33 572 aa6.15□□□□□ -1.42
NFKB1-208ENST00000509165 CARFQ8N187 725 aa6.15□□□□□ -1.42
NFKB1-208ENST00000509165 SYT8Q8NBV8 401 aa6.15□□□□□ -1.42
NFKB1-208ENST00000509165 MRFAP1L1Q96HT8 127 aa6.15□□□□□ -1.42
NFKB1-208ENST00000509165 YIPF4Q9BSR8 244 aa6.15□□□□□ -1.42
NFKB1-208ENST00000509165 NCOA5Q9HCD5 579 aaKnown RBP6.15□□□□□ -1.42
NFKB1-208ENST00000509165 DSEQ9UL01 958 aa6.15□□□□□ -1.42
NFKB1-208ENST00000509165 CBLCQ9ULV8 474 aa6.15□□□□□ -1.42
NFKB1-208ENST00000509165 EPRSP07814 1512 aaKnown RBP6.15□□□□□ -1.43
NFKB1-208ENST00000509165 ABCC2Q92887 1545 aa6.15□□□□□ -1.43
NFKB1-208ENST00000509165 OTOL1A6NHN0 477 aaPredicted RBP6.14□□□□□ -1.43
NFKB1-208ENST00000509165 EFCAB14O75071 495 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 AMY2AP04746 511 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 CKMP06732 381 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 PYGMP11217 842 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 AMY2BP19961 511 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 GRIN1Q05586 938 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 KCTD1Q719H9 257 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 C16orf59Q7L2K0 433 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 SP8Q8IXZ3 490 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 FEZF2Q8TBJ5 459 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 FBXW5Q969U6 566 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 SPATA25Q9BR10 227 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 ZCCHC4Q9H5U6 513 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 TRIM39Q9HCM9 518 aa6.14□□□□□ -1.43
NFKB1-208ENST00000509165 RBPJLQ9UBG7 517 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms