RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-208ENST00000504813 CYP2W1Q8TAV3 490 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 AFAP1L1Q8TED9 768 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 ZNF274Q96GC6 653 aaPredicted RBP16.8■□□□□ 0.28
CNBP-208ENST00000504813 INTS4Q96HW7 963 aaKnown RBP16.8■□□□□ 0.28
CNBP-208ENST00000504813 MXRA8Q9BRK3 442 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 TMEM265A0A087WTH1 108 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 PPFIA3O75145 1194 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 CKBP12277 381 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 SREBF1P36956 1147 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 SP4Q02446 784 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 GPNMBQ14956 572 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 TRIM71Q2Q1W2 868 aaKnown RBP16.8■□□□□ 0.28
CNBP-208ENST00000504813 TRIM50Q86XT4 487 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 WNT8BQ93098 351 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 LARP6Q9BRS8 491 aaKnown RBP16.8■□□□□ 0.28
CNBP-208ENST00000504813 MTIF3Q9H2K0 278 aaKnown RBP16.8■□□□□ 0.28
CNBP-208ENST00000504813 KCNH7Q9NS40 1196 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 STXBP5LQ9Y2K9 1186 aa16.8■□□□□ 0.28
CNBP-208ENST00000504813 EYSQ5T1H1 3165 aa16.79■□□□□ 0.28
CNBP-208ENST00000504813 GSTTP1A0A1W2PQM5 241 aa16.79■□□□□ 0.28
CNBP-208ENST00000504813 SMIM10L2AP0DMW4 78 aa16.79■□□□□ 0.28
CNBP-208ENST00000504813 SMIM10L2BP0DMW5 78 aa16.79■□□□□ 0.28
CNBP-208ENST00000504813 TCF7P36402 384 aaPredicted RBP16.79■□□□□ 0.28
CNBP-208ENST00000504813 PBX2P40425 430 aa16.79■□□□□ 0.28
CNBP-208ENST00000504813 CCDC12Q8WUD4 166 aaPredicted RBP16.79■□□□□ 0.28
CNBP-208ENST00000504813 CRYGNQ8WXF5 182 aa16.79■□□□□ 0.28
CNBP-208ENST00000504813 SLC26A6Q9BXS9 759 aa16.79■□□□□ 0.28
CNBP-208ENST00000504813 PBX4Q9BYU1 374 aa16.79■□□□□ 0.28
CNBP-208ENST00000504813 RNPEPQ9H4A4 650 aa16.79■□□□□ 0.28
CNBP-208ENST00000504813 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.79■□□□□ 0.28
CNBP-208ENST00000504813 C17orf102A2RUQ5 167 aa16.78■□□□□ 0.28
CNBP-208ENST00000504813 SELPP16109 830 aa16.78■□□□□ 0.28
CNBP-208ENST00000504813 AKAP17AQ02040 695 aaKnown RBP16.78■□□□□ 0.28
CNBP-208ENST00000504813 CEP55Q53EZ4 464 aa16.78■□□□□ 0.28
CNBP-208ENST00000504813 UTP14CQ5TAP6 766 aaKnown RBP16.78■□□□□ 0.28
CNBP-208ENST00000504813 JAKMIP3Q5VZ66 844 aa16.78■□□□□ 0.28
CNBP-208ENST00000504813 TRAF7Q6Q0C0 670 aa16.78■□□□□ 0.28
CNBP-208ENST00000504813 LRRC8DQ7L1W4 858 aa16.78■□□□□ 0.28
CNBP-208ENST00000504813 SERINC5Q86VE9 423 aa16.78■□□□□ 0.28
CNBP-208ENST00000504813 SEPT1Q8WYJ6 367 aa16.78■□□□□ 0.28
CNBP-208ENST00000504813 C6orf50Q9HD87 102 aa16.78■□□□□ 0.28
CNBP-208ENST00000504813 PKD2L1Q9P0L9 805 aa16.78■□□□□ 0.28
CNBP-208ENST00000504813 ZNF215Q9UL58 517 aaPredicted RBP16.78■□□□□ 0.28
CNBP-208ENST00000504813 WDR81Q562E7 1941 aa16.78■□□□□ 0.28
CNBP-208ENST00000504813 MEIS1O00470 390 aa16.77■□□□□ 0.28
CNBP-208ENST00000504813 ARP10275 920 aa16.77■□□□□ 0.28
CNBP-208ENST00000504813 ARHGAP4P98171 946 aa16.77■□□□□ 0.28
CNBP-208ENST00000504813 CDX2Q99626 313 aaPredicted RBP16.77■□□□□ 0.28
CNBP-208ENST00000504813 SLC4A7Q9Y6M7 1214 aa16.77■□□□□ 0.28
CNBP-208ENST00000504813 NFASCO94856 1347 aa16.77■□□□□ 0.27
CNBP-208ENST00000504813 SIP14410 1827 aa16.76■□□□□ 0.27
CNBP-208ENST00000504813 TREHO43280 583 aa16.76■□□□□ 0.27
CNBP-208ENST00000504813 PARNO95453 639 aaKnown RBP16.76■□□□□ 0.27
CNBP-208ENST00000504813 CYP3A4P08684 503 aa16.76■□□□□ 0.27
CNBP-208ENST00000504813 GNA11P29992 359 aa16.76■□□□□ 0.27
CNBP-208ENST00000504813 ADAM17P78536 824 aa16.76■□□□□ 0.27
CNBP-208ENST00000504813 ZNF618Q5T7W0 954 aa16.76■□□□□ 0.27
CNBP-208ENST00000504813 MCTP2Q6DN12 878 aa16.76■□□□□ 0.27
CNBP-208ENST00000504813 REXO1Q8N1G1 1221 aaKnown RBP16.76■□□□□ 0.27
CNBP-208ENST00000504813 ATP6V0A1Q93050 837 aa16.76■□□□□ 0.27
CNBP-208ENST00000504813 TIFAQ96CG3 184 aa16.76■□□□□ 0.27
CNBP-208ENST00000504813 AGO4Q9HCK5 861 aaKnown RBP16.76■□□□□ 0.27
CNBP-208ENST00000504813 TPCN1Q9ULQ1 816 aa16.76■□□□□ 0.27
CNBP-208ENST00000504813 CHD9Q3L8U1 2897 aa16.76■□□□□ 0.27
CNBP-208ENST00000504813 IGLV3-22A0A075B6J6 115 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 ZBBXA8MT70 800 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 FAM86B1E9PN63 330 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 NBNO60934 754 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 CXCL10P02778 98 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 FAM86B2P0C5J1 330 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 ACTN1P12814 892 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 DDIT3P35638 169 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 STK3Q13188 491 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 ITGB3BPQ13352 177 aaPredicted RBP16.75■□□□□ 0.27
CNBP-208ENST00000504813 NIPA1Q7RTP0 329 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 CCDC148Q8NFR7 591 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 FTOQ9C0B1 505 aaKnown RBP eCLIP16.75■□□□□ 0.27
CNBP-208ENST00000504813 ZNF576Q9H609 170 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 JPH1Q9HDC5 661 aaPredicted RBP16.75■□□□□ 0.27
CNBP-208ENST00000504813 SH3GLB2Q9NR46 395 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 SETD4Q9NVD3 440 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 VPS54Q9P1Q0 977 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 SLC9A2Q9UBY0 812 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 MICAL3Q7RTP6 2002 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 ZNF76P36508 570 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 NUCB2P80303 420 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 SSRP1Q08945 709 aaKnown RBP16.75■□□□□ 0.27
CNBP-208ENST00000504813 MBTPS1Q14703 1052 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 ME3Q16798 604 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 CCDC83Q8IWF9 413 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 RASGRP4Q8TDF6 673 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 PCYT2Q99447 389 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 SMC3Q9UQE7 1217 aa16.75■□□□□ 0.27
CNBP-208ENST00000504813 MYH9P35579 1960 aaKnown RBP16.74■□□□□ 0.27
CNBP-208ENST00000504813 EMSYQ7Z589 1322 aa16.74■□□□□ 0.27
CNBP-208ENST00000504813 RBAK-RBAKDNI3L0D1 243 aa16.74■□□□□ 0.27
CNBP-208ENST00000504813 LGR5O75473 907 aa16.74■□□□□ 0.27
CNBP-208ENST00000504813 GNAT1P11488 350 aa16.74■□□□□ 0.27
CNBP-208ENST00000504813 ATP2A2P16615 1042 aaKnown RBP16.74■□□□□ 0.27
CNBP-208ENST00000504813 RAB30Q15771 203 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms