RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SMARCA1P28370 1054 aa15.14■□□□□ 0.01
DDX41-204ENST00000504807 HOXC8P31273 242 aa15.14■□□□□ 0.01
DDX41-204ENST00000504807 ICAM3P32942 547 aa15.14■□□□□ 0.01
DDX41-204ENST00000504807 IRS1P35568 1242 aa15.14■□□□□ 0.01
DDX41-204ENST00000504807 KCNJ6P48051 423 aa15.14■□□□□ 0.01
DDX41-204ENST00000504807 RBL2Q08999 1139 aa15.14■□□□□ 0.01
DDX41-204ENST00000504807 WWC2Q6AWC2 1192 aa15.14■□□□□ 0.01
DDX41-204ENST00000504807 APOA5Q6Q788 366 aa15.14■□□□□ 0.01
DDX41-204ENST00000504807 CYFIP1Q7L576 1253 aa15.14■□□□□ 0.01
DDX41-204ENST00000504807 GPR20Q99678 358 aa15.14■□□□□ 0.01
DDX41-204ENST00000504807 UPF3BQ9BZI7 483 aaKnown RBP15.14■□□□□ 0.01
DDX41-204ENST00000504807 MYO15AQ9UKN7 3530 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 TRIP12Q14669 1992 aaPredicted RBP15.13■□□□□ 0.01
DDX41-204ENST00000504807 C19orf67A6NJJ6 358 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 PPFIA4O75335 1185 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 CDC45O75419 566 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 LGALS2P05162 132 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 CDC27P30260 824 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 KIF5BP33176 963 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 DEFB103AP81534 67 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 ZNF618Q5T7W0 954 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 PCNX4Q63HM2 1172 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 LRRC8DQ7L1W4 858 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 ADHFE1Q8IWW8 467 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 C7orf31Q8N865 590 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 PGBD1Q96JS3 809 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 NEK1Q96PY6 1258 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 NOD1Q9Y239 953 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 SLC12A7Q9Y666 1083 aa15.13■□□□□ 0.01
DDX41-204ENST00000504807 TGFB3P10600 412 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 SELPP16109 830 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 RFC2P35250 354 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 BFSP2Q13515 415 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 TSGA10IPQ3SY00 556 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 SMARCC2Q8TAQ2 1214 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 AFAP1L1Q8TED9 768 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 KCNB2Q92953 911 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 TGS1Q96RS0 853 aaKnown RBP15.12■□□□□ 0.01
DDX41-204ENST00000504807 LZTS2Q9BRK4 669 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 MLXIPQ9HAP2 919 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 PRKAG3Q9UGI9 489 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 FAM50BQ9Y247 325 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 CACNA1HO95180 2353 aa15.12■□□□□ 0.01
DDX41-204ENST00000504807 TREHO43280 583 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 FIBPO43427 364 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 CXCL10P02778 98 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 SMIM10L2AP0DMW4 78 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 SMIM10L2BP0DMW5 78 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 KCNA2P16389 499 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 ERVK-21P61565 698 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 WDR5P61964 334 aaKnown RBP15.11■□□□□ 0.01
DDX41-204ENST00000504807 SP4Q02446 784 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 PTK7Q13308 1070 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
DDX41-204ENST00000504807 KCNV1Q6PIU1 500 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 METTL7BQ6UX53 244 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 DHX32Q7L7V1 743 aaKnown RBP15.11■□□□□ 0.01
DDX41-204ENST00000504807 HEATR3Q7Z4Q2 680 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 SERINC5Q86VE9 423 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 TMTC2Q8N394 836 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 RETREG2Q8NC44 543 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 CYP2W1Q8TAV3 490 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 CAGE1Q8TC20 777 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 PBXIP1Q96AQ6 731 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 PRRX2Q99811 253 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 PSTPIP2Q9H939 334 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 TMEM260Q9NX78 707 aa15.11■□□□□ 0.01
DDX41-204ENST00000504807 SEC63Q9UGP8 760 aaKnown RBP15.11■□□□□ 0.01
DDX41-204ENST00000504807 H3BRB1 525 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 BAIAP3O94812 1187 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 CALM1P0DP23 149 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 CALM2P0DP24 149 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 CALM3P0DP25 149 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 GNAQP50148 359 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 TRAF1Q13077 416 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 HERC4Q5GLZ8 1057 aaPredicted RBP15.1■□□□□ 0.01
DDX41-204ENST00000504807 ERMP1Q7Z2K6 904 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 SUGP1Q8IWZ8 645 aaKnown RBP15.1■□□□□ 0.01
DDX41-204ENST00000504807 ATOH1Q92858 354 aaPredicted RBP15.1■□□□□ 0.01
DDX41-204ENST00000504807 ZBTB10Q96DT7 871 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 KATNAL1Q9BW62 490 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 RNPEPQ9H4A4 650 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 TUT1Q9H6E5 874 aaKnown RBP15.1■□□□□ 0.01
DDX41-204ENST00000504807 PKD2L1Q9P0L9 805 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 PCDHA6Q9UN73 950 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 PCDHA8Q9Y5H6 950 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 SNX14Q9Y5W7 946 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 UBIAD1Q9Y5Z9 338 aa15.1■□□□□ 0.01
DDX41-204ENST00000504807 TECTAO75443 2155 aa15.09■□□□□ 0.01
DDX41-204ENST00000504807 CACNA1GO43497 2377 aa15.09■□□□□ 0.01
DDX41-204ENST00000504807 KLF18A0A0U1RQI7 1052 aa15.09■□□□□ 0.01
DDX41-204ENST00000504807 GSTTP1A0A1W2PQM5 241 aa15.09■□□□□ 0.01
DDX41-204ENST00000504807 LINC01553A4QN01 128 aa15.09■□□□□ 0.01
DDX41-204ENST00000504807 TMEM221A6NGB7 291 aa15.09■□□□□ 0.01
DDX41-204ENST00000504807 M0R296 226 aa15.09■□□□□ 0.01
DDX41-204ENST00000504807 STXBP3O00186 592 aa15.09■□□□□ 0.01
DDX41-204ENST00000504807 ADAM17P78536 824 aa15.09■□□□□ 0.01
DDX41-204ENST00000504807 GNPTABQ3T906 1256 aa15.09■□□□□ 0.01
DDX41-204ENST00000504807 UTP14CQ5TAP6 766 aaKnown RBP15.09■□□□□ 0.01
DDX41-204ENST00000504807 FAM117BQ6P1L5 589 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms