RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 DLL4Q9NR61 685 aa6.24□□□□□ -1.41
SUB1-204ENST00000504016 PDPK1O15530 556 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 C6P13671 934 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 BMS1Q14692 1282 aaKnown RBP6.23□□□□□ -1.41
SUB1-204ENST00000504016 CDSNQ15517 529 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 SLFN13Q68D06 897 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 OTOP3Q7RTS5 596 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 PROSER1Q86XN7 944 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 DTX3Q8N9I9 347 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 NUDT10Q8NFP7 164 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 NUDT11Q96G61 164 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 SRPK1Q96SB4 655 aaKnown RBP6.23□□□□□ -1.41
SUB1-204ENST00000504016 KCNJ15Q99712 375 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 CD248Q9HCU0 757 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 SIRPGQ9P1W8 387 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 NUB1Q9Y5A7 615 aa6.23□□□□□ -1.41
SUB1-204ENST00000504016 CKMP06732 381 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 GNAT1P11488 350 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 COL6A1P12109 1028 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 COL6A2P12110 1019 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 GDF5P43026 501 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 SPIRE1Q08AE8 756 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 TUSC3Q13454 348 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 SMAD2Q15796 467 aaKnown RBP6.22□□□□□ -1.41
SUB1-204ENST00000504016 MTERF2Q49AM1 385 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 PALM2Q8IXS6 379 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 DNERQ8NFT8 737 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 DCAF4Q8WV16 495 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 ARMC5Q96C12 935 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 ADAM29Q9UKF5 820 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 TCAF1Q9Y4C2 921 aa6.22□□□□□ -1.41
SUB1-204ENST00000504016 IQCA1LA6NCM1 817 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 PRODHO43272 600 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 DIAPH1O60610 1272 aaKnown RBP6.21□□□□□ -1.42
SUB1-204ENST00000504016 KLHL18O94889 574 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 LTFP02788 710 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 FAHP16930 419 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 TACR2P21452 398 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 GRK2P25098 689 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 GRK3P35626 688 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 GLRBP48167 497 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 SERINC3Q13530 473 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 SKIDA1Q1XH10 827 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 KIZQ2M2Z5 673 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 PAN2Q504Q3 1202 aaKnown RBP6.21□□□□□ -1.42
SUB1-204ENST00000504016 KCNT2Q6UVM3 1135 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 LBX2Q6XYB7 198 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 Q6ZUG5 572 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 RALYLQ86SE5 291 aaKnown RBP6.21□□□□□ -1.42
SUB1-204ENST00000504016 UBXN4Q92575 508 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 SGSM3Q96HU1 749 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 DEPDC7Q96QD5 511 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 AARSD1Q9BTE6 412 aaKnown RBP6.21□□□□□ -1.42
SUB1-204ENST00000504016 ZSWIM4Q9H7M6 989 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 SNTG2Q9NY99 539 aa6.21□□□□□ -1.42
SUB1-204ENST00000504016 PATE3B3GLJ2 98 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 ZNF623O75123 536 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 CHGBP05060 677 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 ENO2P09104 434 aaPredicted RBP6.2□□□□□ -1.42
SUB1-204ENST00000504016 CCDC144BQ3MJ40 725 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 YOD1Q5VVQ6 348 aaPredicted RBP6.2□□□□□ -1.42
SUB1-204ENST00000504016 NBPF6Q5VWK0 638 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 UHMK1Q8TAS1 419 aaKnown RBP6.2□□□□□ -1.42
SUB1-204ENST00000504016 NBPF4Q96M43 638 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 SORCS2Q96PQ0 1159 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 DNAJC7Q99615 494 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 CCDC113Q9H0I3 377 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 OSBPL2Q9H1P3 480 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 ARHGAP20Q9P2F6 1191 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 ZFP69BQ9UJL9 534 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 MSRB2Q9Y3D2 182 aa6.2□□□□□ -1.42
SUB1-204ENST00000504016 NKRFO15226 690 aaKnown RBP eCLIP6.19□□□□□ -1.42
SUB1-204ENST00000504016 KNG1P01042 644 aa6.19□□□□□ -1.42
SUB1-204ENST00000504016 SELENOPP49908 381 aa6.19□□□□□ -1.42
SUB1-204ENST00000504016 PFKPQ01813 784 aa6.19□□□□□ -1.42
SUB1-204ENST00000504016 SSRP1Q08945 709 aaKnown RBP6.19□□□□□ -1.42
SUB1-204ENST00000504016 IFRD2Q12894 506 aaPredicted RBP6.19□□□□□ -1.42
SUB1-204ENST00000504016 RASA3Q14644 834 aa6.19□□□□□ -1.42
SUB1-204ENST00000504016 SOGA3Q5TF21 947 aa6.19□□□□□ -1.42
SUB1-204ENST00000504016 NSMFQ6X4W1 530 aa6.19□□□□□ -1.42
SUB1-204ENST00000504016 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.19□□□□□ -1.42
SUB1-204ENST00000504016 IFNL3Q8IZI9 196 aa6.19□□□□□ -1.42
SUB1-204ENST00000504016 STPG3Q8N7X2 389 aa6.19□□□□□ -1.42
SUB1-204ENST00000504016 ZFYVE21Q9BQ24 234 aa6.19□□□□□ -1.42
SUB1-204ENST00000504016 SCAND2PQ9GZW5 306 aaPredicted RBP6.19□□□□□ -1.42
SUB1-204ENST00000504016 MEGF9Q9H1U4 602 aa6.19□□□□□ -1.42
SUB1-204ENST00000504016 VPS11Q9H270 941 aa6.19□□□□□ -1.42
SUB1-204ENST00000504016 DSEQ9UL01 958 aa6.19□□□□□ -1.42
SUB1-204ENST00000504016 BLACEA4D250 179 aa6.18□□□□□ -1.42
SUB1-204ENST00000504016 MUSKO15146 869 aa6.18□□□□□ -1.42
SUB1-204ENST00000504016 AMHP03971 560 aa6.18□□□□□ -1.42
SUB1-204ENST00000504016 FGFR1P11362 822 aa6.18□□□□□ -1.42
SUB1-204ENST00000504016 PABPC1P11940 636 aaKnown RBP6.18□□□□□ -1.42
SUB1-204ENST00000504016 HMGA2P52926 109 aa6.18□□□□□ -1.42
SUB1-204ENST00000504016 GPR85P60893 370 aa6.18□□□□□ -1.42
SUB1-204ENST00000504016 RASGRF1Q13972 1273 aa6.18□□□□□ -1.42
SUB1-204ENST00000504016 CD276Q5ZPR3 534 aa6.18□□□□□ -1.42
SUB1-204ENST00000504016 CRIP3Q6Q6R5 217 aa6.18□□□□□ -1.42
SUB1-204ENST00000504016 DPH6Q7L8W6 267 aa6.18□□□□□ -1.42
SUB1-204ENST00000504016 IFNL2Q8IZJ0 200 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms