RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 SP2Q02086 613 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 HYAL1Q12794 435 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 TRDNQ13061 729 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 NECTIN1Q15223 517 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 CTC1Q2NKJ3 1217 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 IFIT1BQ5T764 474 aaKnown RBP13.92□□□□□ -0.18
THBS3-209ENST00000498500 ERICH6BQ5W0A0 696 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 CREB3L3Q68CJ9 461 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 NCOA7Q8NI08 942 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 PHOX2BQ99453 314 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 C11orf84Q9BUA3 381 aaPredicted RBP13.92□□□□□ -0.18
THBS3-209ENST00000498500 AMNQ9BXJ7 453 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 LMAN2LQ9H0V9 348 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 JMJD4Q9H9V9 463 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 RWDD3Q9Y3V2 267 aa13.92□□□□□ -0.18
THBS3-209ENST00000498500 BAZ2BQ9UIF8 2168 aaKnown RBP13.92□□□□□ -0.18
THBS3-209ENST00000498500 C5orf67F2Z3F1 127 aa13.91□□□□□ -0.18
THBS3-209ENST00000498500 STXBP3O00186 592 aa13.91□□□□□ -0.18
THBS3-209ENST00000498500 NOP56O00567 594 aaKnown RBP13.91□□□□□ -0.18
THBS3-209ENST00000498500 GRM6O15303 877 aa13.91□□□□□ -0.18
THBS3-209ENST00000498500 LGALS2P05162 132 aa13.91□□□□□ -0.18
THBS3-209ENST00000498500 TGFB3P10600 412 aa13.91□□□□□ -0.18
THBS3-209ENST00000498500 GNAT1P11488 350 aa13.91□□□□□ -0.18
THBS3-209ENST00000498500 UBA1P22314 1058 aaKnown RBP13.91□□□□□ -0.18
THBS3-209ENST00000498500 BMPR1AP36894 532 aa13.91□□□□□ -0.18
THBS3-209ENST00000498500 SMAD4Q13485 552 aaKnown RBP13.91□□□□□ -0.18
THBS3-209ENST00000498500 PGM5Q15124 567 aa13.91□□□□□ -0.18
THBS3-209ENST00000498500 RALYLQ86SE5 291 aaKnown RBP13.91□□□□□ -0.18
THBS3-209ENST00000498500 VSIG10LQ86VR7 867 aa13.91□□□□□ -0.18
THBS3-209ENST00000498500 EDAQ92838 391 aa13.91□□□□□ -0.18
THBS3-209ENST00000498500 ZFP91Q96JP5 570 aaPredicted RBP13.91□□□□□ -0.18
THBS3-209ENST00000498500 MAP3K20Q9NYL2 800 aaKnown RBP13.91□□□□□ -0.18
THBS3-209ENST00000498500 CD207Q9UJ71 328 aa13.91□□□□□ -0.18
THBS3-209ENST00000498500 CCND2P30279 289 aa13.9□□□□□ -0.18
THBS3-209ENST00000498500 HOXA13P31271 388 aaPredicted RBP13.9□□□□□ -0.18
THBS3-209ENST00000498500 HOXC8P31273 242 aa13.9□□□□□ -0.18
THBS3-209ENST00000498500 PTPN5P54829 565 aa13.9□□□□□ -0.18
THBS3-209ENST00000498500 SLC35G1Q2M3R5 365 aa13.9□□□□□ -0.18
THBS3-209ENST00000498500 STAG2Q8N3U4 1231 aa13.9□□□□□ -0.18
THBS3-209ENST00000498500 IGDCC4Q8TDY8 1250 aa13.9□□□□□ -0.18
THBS3-209ENST00000498500 GPKOWQ92917 476 aaPredicted RBP eCLIP13.9□□□□□ -0.18
THBS3-209ENST00000498500 PBXIP1Q96AQ6 731 aa13.9□□□□□ -0.18
THBS3-209ENST00000498500 USP26Q9BXU7 913 aa13.9□□□□□ -0.18
THBS3-209ENST00000498500 SETD4Q9NVD3 440 aa13.9□□□□□ -0.18
THBS3-209ENST00000498500 TTC3P53804 2025 aa13.9□□□□□ -0.18
THBS3-209ENST00000498500 KIAA1671Q9BY89 1806 aa13.9□□□□□ -0.18
THBS3-209ENST00000498500 ADGRA3Q8IWK6 1321 aa13.9□□□□□ -0.19
THBS3-209ENST00000498500 OPLAHO14841 1288 aa13.89□□□□□ -0.19
THBS3-209ENST00000498500 IFIT3O14879 490 aaKnown RBP13.89□□□□□ -0.19
THBS3-209ENST00000498500 TBX10O75333 385 aa13.89□□□□□ -0.19
THBS3-209ENST00000498500 GTF2F1P35269 517 aaKnown RBP eCLIP13.89□□□□□ -0.19
THBS3-209ENST00000498500 NDUFV1P49821 464 aa13.89□□□□□ -0.19
THBS3-209ENST00000498500 GRM4Q14833 912 aa13.89□□□□□ -0.19
THBS3-209ENST00000498500 SUGP1Q8IWZ8 645 aaKnown RBP13.89□□□□□ -0.19
THBS3-209ENST00000498500 PRSS33Q8NF86 280 aa13.89□□□□□ -0.19
THBS3-209ENST00000498500 IL31RAQ8NI17 732 aa13.89□□□□□ -0.19
THBS3-209ENST00000498500 PRRX2Q99811 253 aa13.89□□□□□ -0.19
THBS3-209ENST00000498500 LY9Q9HBG7 655 aa13.89□□□□□ -0.19
THBS3-209ENST00000498500 MAD2L2Q9UI95 211 aa13.89□□□□□ -0.19
THBS3-209ENST00000498500 PCDHA1Q9Y5I3 950 aa13.89□□□□□ -0.19
THBS3-209ENST00000498500 LOXHD1Q8IVV2 1947 aa13.89□□□□□ -0.19
THBS3-209ENST00000498500 TMEM221A6NGB7 291 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 M0R296 226 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 SH2B2O14492 632 aaPredicted RBP13.88□□□□□ -0.19
THBS3-209ENST00000498500 LINC01565O15544 149 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 ST18O60284 1047 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 ARHGAP4P98171 946 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 GHRHRQ02643 423 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 TROAPQ12815 778 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 ADAM15Q13444 863 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 BTG3Q14201 252 aaPredicted RBP13.88□□□□□ -0.19
THBS3-209ENST00000498500 WTAPQ15007 396 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 IER5LQ5T953 404 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 CASC1Q6TDU7 716 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 TRIM67Q6ZTA4 783 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 BMP8AQ7Z5Y6 402 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 FCHSD1Q86WN1 690 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 PPP2R3CQ969Q6 453 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 MTMR8Q96EF0 704 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 BCAS3Q9H6U6 928 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 ALG13Q9NP73 1137 aaKnown RBP13.88□□□□□ -0.19
THBS3-209ENST00000498500 ZNF215Q9UL58 517 aaPredicted RBP13.88□□□□□ -0.19
THBS3-209ENST00000498500 KMT2EQ8IZD2 1858 aa13.88□□□□□ -0.19
THBS3-209ENST00000498500 PALM3A6NDB9 673 aaPredicted RBP13.87□□□□□ -0.19
THBS3-209ENST00000498500 GCOM1H8Y6P7 765 aaPredicted RBP13.87□□□□□ -0.19
THBS3-209ENST00000498500 ZBTB5O15062 677 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 PRC1O43663 620 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 MMP1P03956 469 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 LINC00271P0C7V0 271 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 POLR2MP0CAP2 368 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 GHRP10912 638 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 NEDD9Q14511 834 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 PKN1Q16512 942 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 GNPTABQ3T906 1256 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 FAM26DQ5JW98 314 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 UTP14CQ5TAP6 766 aaKnown RBP13.87□□□□□ -0.19
THBS3-209ENST00000498500 CYFIP1Q7L576 1253 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 SAMD3Q8N6K7 520 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms