RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SERINC5Q86VE9 423 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 TRIM50Q86XT4 487 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 REXO1Q8N1G1 1221 aaKnown RBP15.04■□□□□ -0
ERCC3-209ENST00000494464 SLC26A6Q9BXS9 759 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 PBX4Q9BYU1 374 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 SEMA6BQ9H3T3 888 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 PDRG1Q9NUG6 133 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 TMEM260Q9NX78 707 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 TELO2Q9Y4R8 837 aa15.04■□□□□ -0
ERCC3-209ENST00000494464 TET1Q8NFU7 2136 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 MEIS1O00470 390 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 BAIAP3O94812 1187 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 RAB30Q15771 203 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 TRIM22Q8IYM9 498 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 BICD2Q8TD16 824 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 SEPT1Q8WYJ6 367 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 WNT8BQ93098 351 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 TIFAQ96CG3 184 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 FAM161BQ96MY7 647 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 JPH1Q9HDC5 661 aaPredicted RBP15.03■□□□□ -0
ERCC3-209ENST00000494464 SH3GLB2Q9NR46 395 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 SLC4A7Q9Y6M7 1214 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 PTPRSQ13332 1948 aa15.03■□□□□ -0
ERCC3-209ENST00000494464 GSTTP1A0A1W2PQM5 241 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 GRXCR1A8MXD5 290 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 CAND2O75155 1236 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 CXCL10P02778 98 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 CYP3A4P08684 503 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 GNAT1P11488 350 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 ZNF200P98182 395 aaPredicted RBP15.02■□□□□ -0
ERCC3-209ENST00000494464 GPNMBQ14956 572 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 UTP14CQ5TAP6 766 aaKnown RBP15.02■□□□□ -0
ERCC3-209ENST00000494464 JAKMIP3Q5VZ66 844 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 TRAF7Q6Q0C0 670 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 FAM177A1Q8N128 213 aaPredicted RBP15.02■□□□□ -0
ERCC3-209ENST00000494464 CYP2W1Q8TAV3 490 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 ATP6V0A1Q93050 837 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 SDF4Q9BRK5 362 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 RNPEPQ9H4A4 650 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 PKD2L1Q9P0L9 805 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 SLC9A2Q9UBY0 812 aa15.02■□□□□ -0
ERCC3-209ENST00000494464 IGLV3-22A0A075B6J6 115 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 ZBBXA8MT70 800 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 CPLX1O14810 134 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 LGR5O75473 907 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 DEXIO95424 95 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 ARP10275 920 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 PBX2P40425 430 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 ADAM17P78536 824 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 SETQ01105 290 aaPredicted RBP15.01□□□□□ -0.01
ERCC3-209ENST00000494464 CPLX2Q6PUV4 134 aaKnown RBP15.01□□□□□ -0.01
ERCC3-209ENST00000494464 LMBR1Q8WVP7 490 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 SLC9A7Q96T83 725 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 SMARCAD1Q9H4L7 1026 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 AGO4Q9HCK5 861 aaKnown RBP15.01□□□□□ -0.01
ERCC3-209ENST00000494464 ERAP1Q9NZ08 941 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 VPS54Q9P1Q0 977 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 KAT6AQ92794 2004 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 NRCAMQ92823 1304 aa15.01□□□□□ -0.01
ERCC3-209ENST00000494464 SIP14410 1827 aa15□□□□□ -0.01
ERCC3-209ENST00000494464 FAM86B1E9PN63 330 aa15□□□□□ -0.01
ERCC3-209ENST00000494464 K7ELQ4 463 aaPredicted RBP15□□□□□ -0.01
ERCC3-209ENST00000494464 ADAMTS3O15072 1205 aa15□□□□□ -0.01
ERCC3-209ENST00000494464 TREHO43280 583 aa15□□□□□ -0.01
ERCC3-209ENST00000494464 NBNO60934 754 aa15□□□□□ -0.01
ERCC3-209ENST00000494464 FAM86B2P0C5J1 330 aa15□□□□□ -0.01
ERCC3-209ENST00000494464 ZNF76P36508 570 aa15□□□□□ -0.01
ERCC3-209ENST00000494464 SSRP1Q08945 709 aaKnown RBP15□□□□□ -0.01
ERCC3-209ENST00000494464 ITGB3BPQ13352 177 aaPredicted RBP15□□□□□ -0.01
ERCC3-209ENST00000494464 ZNF618Q5T7W0 954 aa15□□□□□ -0.01
ERCC3-209ENST00000494464 CNKSR3Q6P9H4 555 aa15□□□□□ -0.01
ERCC3-209ENST00000494464 PHOSPHO2Q8TCD6 241 aa15□□□□□ -0.01
ERCC3-209ENST00000494464 CDX2Q99626 313 aaPredicted RBP15□□□□□ -0.01
ERCC3-209ENST00000494464 FTOQ9C0B1 505 aaKnown RBP eCLIP15□□□□□ -0.01
ERCC3-209ENST00000494464 ZNF576Q9H609 170 aa15□□□□□ -0.01
ERCC3-209ENST00000494464 MSRAQ9UJ68 235 aa15□□□□□ -0.01
ERCC3-209ENST00000494464 ST18O60284 1047 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 PPFIA3O75145 1194 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 ATP2A2P16615 1042 aaKnown RBP14.99□□□□□ -0.01
ERCC3-209ENST00000494464 CIITAP33076 1130 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 ACTR2P61160 394 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 STK3Q13188 491 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 MBTPS1Q14703 1052 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 ANKRD1Q15327 319 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 PLA2G4DQ86XP0 818 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 RASGRP4Q8TDF6 673 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 GLG1Q92896 1179 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 PCYT2Q99447 389 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 LARP6Q9BRS8 491 aaKnown RBP14.99□□□□□ -0.01
ERCC3-209ENST00000494464 SETD4Q9NVD3 440 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 PCDHA11Q9Y5I1 949 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 MICAL3Q7RTP6 2002 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 STK36Q9NRP7 1315 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 CHD9Q3L8U1 2897 aa14.99□□□□□ -0.01
ERCC3-209ENST00000494464 PFKFB2O60825 505 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 EFCAB14O75071 495 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 CDKL5O76039 1030 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 ATG7O95352 703 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 THPOP40225 353 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 SCRN1Q12765 414 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms