RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 NKX3-2P78367 333 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 PURAQ00577 322 aaKnown RBP9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 MFSD10Q14728 455 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 CALCRLQ16602 461 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 TMEM266Q2M3C6 531 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 HSDL1Q3SXM5 330 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 TMEM63BQ5T3F8 832 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 CKAP2LQ8IYA6 745 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 SMAP1Q8IYB5 467 aaPredicted RBP9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 CCDC155Q8N6L0 562 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 SPRYD3Q8NCJ5 442 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 GPR20Q99678 358 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 SMARCAD1Q9H4L7 1026 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 CYP3A7-CYP3A51PA0A087WV96 503 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 H3BRB1 525 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 TBX3O15119 743 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 MSH4O15457 936 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 DKC1O60832 514 aaKnown RBP eCLIP9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 ATP9AO75110 1047 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 TDP2O95551 362 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 LGALS2P05162 132 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 PTGS1P23219 599 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 CYP3A7P24462 503 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 SFNP31947 248 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 MCM7P33993 719 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 ANP32AP39687 249 aaKnown RBP9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 JAK3P52333 1124 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 ACTR2P61160 394 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 PSMC6P62333 389 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 IRX5P78411 483 aaPredicted RBP9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 PTPN11Q06124 597 aaPredicted RBP9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 SEMA3FQ13275 785 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 ORC2Q13416 577 aaPredicted RBP9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 NPY5RQ15761 445 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 LRRC26Q2I0M4 334 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 KIAA0753Q2KHM9 967 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 NBPF20Q3BBV1 942 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 TRIM60Q495X7 471 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 RILPL1Q5EBL4 403 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 TTC38Q5R3I4 469 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 C1orf53Q5VUE5 145 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 CCSAPQ6IQ19 270 aaPredicted RBP9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 ZNF746Q6NUN9 644 aaPredicted RBP9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 NFRKBQ6P4R8 1299 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 MIER3Q7Z3K6 550 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 BRAPQ7Z569 592 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 FAM20AQ96MK3 541 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 UIMC1Q96RL1 719 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 RIT2Q99578 217 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 LBHD1Q9BQE6 289 aaPredicted RBP9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 RAB34Q9BZG1 259 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 TUT1Q9H6E5 874 aaKnown RBP9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 TMEM39AQ9NV64 488 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 ERAP1Q9NZ08 941 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 TRPC6Q9Y210 931 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 PCDHA10Q9Y5I2 948 aa9.18□□□□□ -0.94
TM4SF1-204ENST00000493348 SCN10AQ9Y5Y9 1956 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 WDR81Q562E7 1941 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 ALPK3Q96L96 1907 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 IGLV3-22A0A075B6J6 115 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 C17orf102A2RUQ5 167 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 ADAMTS3O15072 1205 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 CTAGE5O15320 804 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 CLTBP09497 229 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 MNX1P50219 401 aaPredicted RBP9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 SLC26A2P50443 739 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 STAT5BP51692 787 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 ITGB3BPQ13352 177 aaPredicted RBP9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 UBE2Q1Q7Z7E8 422 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 ERMNQ8TAM6 284 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 CRYGNQ8WXF5 182 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 CCDC43Q96MW1 224 aaKnown RBP9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 TOX2Q96NM4 488 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 ZNF302Q9NR11 478 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 DISC1Q9NRI5 854 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 PCDHA12Q9UN75 941 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 CEP131Q9UPN4 1083 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 DNAH12Q6ZR08 3092 aa9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 TRIP12Q14669 1992 aaPredicted RBP9.17□□□□□ -0.94
TM4SF1-204ENST00000493348 STX6O43752 255 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 SLC37A4O43826 429 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 BMP15O95972 392 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 F2P00734 622 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 RAG1P15918 1043 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 SYT1P21579 422 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 U2AF2P26368 475 aaKnown RBP eCLIP9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 MARK3P27448 753 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 TXKP42681 527 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 TLE2Q04725 743 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 BFSP2Q13515 415 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 ZNF174Q15697 407 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 PTGISQ16647 500 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 NCAPH2Q6IBW4 605 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 SWSAP1Q6NVH7 229 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 PDXDC2PQ6P474 469 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 PLPPR4Q7Z2D5 763 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 RETREG2Q8NC44 543 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 RDM1Q8NG50 284 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 SLC5A5Q92911 643 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 TNFRSF25Q93038 417 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms