RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 RNPEPQ9H4A4 650 aa28.13■■■□□ 2.09
UPF3A-209ENST00000492270 JPH1Q9HDC5 661 aaPredicted RBP28.13■■■□□ 2.09
UPF3A-209ENST00000492270 ZNF215Q9UL58 517 aaPredicted RBP28.13■■■□□ 2.09
UPF3A-209ENST00000492270 IGLV3-22A0A075B6J6 115 aa28.12■■■□□ 2.09
UPF3A-209ENST00000492270 GRXCR1A8MXD5 290 aa28.12■■■□□ 2.09
UPF3A-209ENST00000492270 CYP3A4P08684 503 aa28.12■■■□□ 2.09
UPF3A-209ENST00000492270 NLRP5P59047 1200 aa28.12■■■□□ 2.09
UPF3A-209ENST00000492270 PTK7Q13308 1070 aa28.12■■■□□ 2.09
UPF3A-209ENST00000492270 BICD2Q8TD16 824 aa28.12■■■□□ 2.09
UPF3A-209ENST00000492270 AFAP1L1Q8TED9 768 aa28.12■■■□□ 2.09
UPF3A-209ENST00000492270 SEPT1Q8WYJ6 367 aa28.12■■■□□ 2.09
UPF3A-209ENST00000492270 UIMC1Q96RL1 719 aa28.12■■■□□ 2.09
UPF3A-209ENST00000492270 SLC9A2Q9UBY0 812 aa28.12■■■□□ 2.09
UPF3A-209ENST00000492270 SIP14410 1827 aa28.11■■■□□ 2.09
UPF3A-209ENST00000492270 CKBP12277 381 aa28.11■■■□□ 2.09
UPF3A-209ENST00000492270 NEK4P51957 841 aa28.11■■■□□ 2.09
UPF3A-209ENST00000492270 RBL2Q08999 1139 aa28.11■■■□□ 2.09
UPF3A-209ENST00000492270 ANKRD1Q15327 319 aa28.11■■■□□ 2.09
UPF3A-209ENST00000492270 MCTP2Q6DN12 878 aa28.11■■■□□ 2.09
UPF3A-209ENST00000492270 PLA2G4DQ86XP0 818 aa28.11■■■□□ 2.09
UPF3A-209ENST00000492270 FAM161BQ96MY7 647 aa28.11■■■□□ 2.09
UPF3A-209ENST00000492270 SETD4Q9NVD3 440 aa28.11■■■□□ 2.09
UPF3A-209ENST00000492270 NFASCO94856 1347 aa28.11■■■□□ 2.09
UPF3A-209ENST00000492270 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.1■■■□□ 2.09
UPF3A-209ENST00000492270 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.1■■■□□ 2.09
UPF3A-209ENST00000492270 TREHO43280 583 aa28.1■■■□□ 2.09
UPF3A-209ENST00000492270 SELPP16109 830 aa28.1■■■□□ 2.09
UPF3A-209ENST00000492270 RFC2P35250 354 aa28.1■■■□□ 2.09
UPF3A-209ENST00000492270 GPNMBQ14956 572 aa28.1■■■□□ 2.09
UPF3A-209ENST00000492270 LRRC8DQ7L1W4 858 aa28.1■■■□□ 2.09
UPF3A-209ENST00000492270 NIPA1Q7RTP0 329 aa28.1■■■□□ 2.09
UPF3A-209ENST00000492270 SERINC5Q86VE9 423 aa28.1■■■□□ 2.09
UPF3A-209ENST00000492270 ATP6V0A1Q93050 837 aa28.1■■■□□ 2.09
UPF3A-209ENST00000492270 PCYT2Q99447 389 aa28.1■■■□□ 2.09
UPF3A-209ENST00000492270 SDF4Q9BRK5 362 aa28.1■■■□□ 2.09
UPF3A-209ENST00000492270 MTMR10Q9NXD2 777 aa28.1■■■□□ 2.09
UPF3A-209ENST00000492270 DDX39AO00148 427 aaKnown RBP28.09■■■□□ 2.09
UPF3A-209ENST00000492270 CTDNEP1O95476 244 aa28.09■■■□□ 2.09
UPF3A-209ENST00000492270 MARK3P27448 753 aa28.09■■■□□ 2.09
UPF3A-209ENST00000492270 NPY5RQ15761 445 aa28.09■■■□□ 2.09
UPF3A-209ENST00000492270 ME3Q16798 604 aa28.09■■■□□ 2.09
UPF3A-209ENST00000492270 NECAB1Q8N987 351 aa28.09■■■□□ 2.09
UPF3A-209ENST00000492270 MYH9P35579 1960 aaKnown RBP28.09■■■□□ 2.09
UPF3A-209ENST00000492270 EDIL3O43854 480 aa28.08■■■□□ 2.09
UPF3A-209ENST00000492270 CDKL5O76039 1030 aa28.08■■■□□ 2.09
UPF3A-209ENST00000492270 PFKMP08237 780 aa28.08■■■□□ 2.09
UPF3A-209ENST00000492270 ACTR2P61160 394 aa28.08■■■□□ 2.09
UPF3A-209ENST00000492270 ZNF618Q5T7W0 954 aa28.08■■■□□ 2.09
UPF3A-209ENST00000492270 ZNF697Q5TEC3 545 aa28.08■■■□□ 2.09
UPF3A-209ENST00000492270 TRAF7Q6Q0C0 670 aa28.08■■■□□ 2.09
UPF3A-209ENST00000492270 PCDHA4Q9UN74 947 aa28.08■■■□□ 2.09
UPF3A-209ENST00000492270 EMSYQ7Z589 1322 aa28.08■■■□□ 2.09
UPF3A-209ENST00000492270 STK36Q9NRP7 1315 aa28.08■■■□□ 2.09
UPF3A-209ENST00000492270 ZBBXA8MT70 800 aa28.07■■■□□ 2.08
UPF3A-209ENST00000492270 PBX2P40425 430 aa28.07■■■□□ 2.08
UPF3A-209ENST00000492270 LMBR1Q8WVP7 490 aa28.07■■■□□ 2.08
UPF3A-209ENST00000492270 GLG1Q92896 1179 aa28.07■■■□□ 2.08
UPF3A-209ENST00000492270 FTOQ9C0B1 505 aaKnown RBP eCLIP28.07■■■□□ 2.08
UPF3A-209ENST00000492270 MTIF3Q9H2K0 278 aaKnown RBP28.07■■■□□ 2.08
UPF3A-209ENST00000492270 TTYH1Q9H313 450 aaPredicted RBP28.07■■■□□ 2.08
UPF3A-209ENST00000492270 KCNJ14Q9UNX9 436 aa28.07■■■□□ 2.08
UPF3A-209ENST00000492270 DHX15O43143 795 aaKnown RBP28.06■■■□□ 2.08
UPF3A-209ENST00000492270 LGR5O75473 907 aa28.06■■■□□ 2.08
UPF3A-209ENST00000492270 CCNE2O96020 404 aa28.06■■■□□ 2.08
UPF3A-209ENST00000492270 DNAJB2P25686 324 aa28.06■■■□□ 2.08
UPF3A-209ENST00000492270 ADAM17P78536 824 aa28.06■■■□□ 2.08
UPF3A-209ENST00000492270 BLIDQ8IZY5 108 aa28.06■■■□□ 2.08
UPF3A-209ENST00000492270 GTF3C6Q969F1 213 aa28.06■■■□□ 2.08
UPF3A-209ENST00000492270 GUCD1Q96NT3 240 aa28.06■■■□□ 2.08
UPF3A-209ENST00000492270 PBX4Q9BYU1 374 aa28.06■■■□□ 2.08
UPF3A-209ENST00000492270 SMARCAD1Q9H4L7 1026 aa28.06■■■□□ 2.08
UPF3A-209ENST00000492270 GJB4Q9NTQ9 266 aa28.06■■■□□ 2.08
UPF3A-209ENST00000492270 ERAP1Q9NZ08 941 aa28.06■■■□□ 2.08
UPF3A-209ENST00000492270 M0R2N6 131 aa28.05■■■□□ 2.08
UPF3A-209ENST00000492270 NBNO60934 754 aa28.05■■■□□ 2.08
UPF3A-209ENST00000492270 CIITAP33076 1130 aa28.05■■■□□ 2.08
UPF3A-209ENST00000492270 THPOP40225 353 aa28.05■■■□□ 2.08
UPF3A-209ENST00000492270 MBTPS1Q14703 1052 aa28.05■■■□□ 2.08
UPF3A-209ENST00000492270 PRR16Q569H4 304 aa28.05■■■□□ 2.08
UPF3A-209ENST00000492270 DAGLBQ8NCG7 672 aa28.05■■■□□ 2.08
UPF3A-209ENST00000492270 LENG9Q96B70 501 aa28.05■■■□□ 2.08
UPF3A-209ENST00000492270 CDH23Q9H251 3354 aa28.05■■■□□ 2.08
UPF3A-209ENST00000492270 MICAL3Q7RTP6 2002 aa28.04■■■□□ 2.08
UPF3A-209ENST00000492270 LOXHD1Q8IVV2 1947 aa28.04■■■□□ 2.08
UPF3A-209ENST00000492270 COL6A3P12111 3177 aa28.04■■■□□ 2.08
UPF3A-209ENST00000492270 IPO5O00410 1097 aaKnown RBP28.04■■■□□ 2.08
UPF3A-209ENST00000492270 SETQ01105 290 aaPredicted RBP28.04■■■□□ 2.08
UPF3A-209ENST00000492270 TCTN1Q2MV58 587 aa28.04■■■□□ 2.08
UPF3A-209ENST00000492270 TBCKQ8TEA7 893 aa28.04■■■□□ 2.08
UPF3A-209ENST00000492270 ZNF577Q9BSK1 485 aa28.04■■■□□ 2.08
UPF3A-209ENST00000492270 SLC4A7Q9Y6M7 1214 aa28.04■■■□□ 2.08
UPF3A-209ENST00000492270 NRCAMQ92823 1304 aa28.03■■■□□ 2.08
UPF3A-209ENST00000492270 PPFIA1Q13136 1202 aa28.03■■■□□ 2.08
UPF3A-209ENST00000492270 PHF20Q9BVI0 1012 aa28.03■■■□□ 2.08
UPF3A-209ENST00000492270 SEMA6BQ9H3T3 888 aa28.03■■■□□ 2.08
UPF3A-209ENST00000492270 ORC3Q9UBD5 711 aaPredicted RBP28.03■■■□□ 2.08
UPF3A-209ENST00000492270 CHD9Q3L8U1 2897 aa28.02■■■□□ 2.08
UPF3A-209ENST00000492270 ATG7O95352 703 aa28.02■■■□□ 2.08
UPF3A-209ENST00000492270 CXCL10P02778 98 aa28.02■■■□□ 2.08
UPF3A-209ENST00000492270 GNAT1P11488 350 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms