RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 CXCL10P02778 98 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 IGFBP4P22692 258 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 GNA11P29992 359 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 CUL4AQ13619 759 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 HIC1Q14526 733 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 MFSD10Q14728 455 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 KIAA0753Q2KHM9 967 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 TRIM71Q2Q1W2 868 aaKnown RBP17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 KCNV1Q6PIU1 500 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 LRRC8DQ7L1W4 858 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 HERC6Q8IVU3 1022 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 PPM1EQ8WY54 764 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 SYMPKQ92797 1274 aaKnown RBP17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 WNT8BQ93098 351 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 FTOQ9C0B1 505 aaKnown RBP eCLIP17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 VPS54Q9P1Q0 977 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 REV3LO60673 3130 aa17.15■□□□□ 0.34
CDC42SE1-205ENST00000491825 SMCO2A6NFE2 343 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 K7ELQ4 463 aaPredicted RBP17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 NBNO60934 754 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 PPFIA4O75335 1185 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 GGPS1O95749 300 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 TGFB3P10600 412 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 CKBP12277 381 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 XBP1P17861 261 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 CCND2P30279 289 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 CLK2P49760 499 aaKnown RBP17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 AP3B2Q13367 1082 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 TCTN1Q2MV58 587 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 MCTP2Q6DN12 878 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 GALNT17Q6IS24 598 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 C7orf31Q8N865 590 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 DAGLBQ8NCG7 672 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 BICD2Q8TD16 824 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 ATXN2LQ8WWM7 1075 aaKnown RBP17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 SPATA33Q96N06 139 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 C16orf70Q9BSU1 422 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 ALG1Q9BT22 464 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 C6orf50Q9HD87 102 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 THEGQ9P2T0 379 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 TRANK1O15050 2925 aa17.14■□□□□ 0.33
CDC42SE1-205ENST00000491825 EPOPA6NHQ4 379 aa17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 RBAK-RBAKDNI3L0D1 243 aa17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 POU3F3P20264 500 aaPredicted RBP17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 HOXC8P31273 242 aa17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 WDR5P61964 334 aaKnown RBP17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 MRPS9P82933 396 aaKnown RBP17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 TAP1Q03518 808 aa17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 PTK7Q13308 1070 aa17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 MBTPS1Q14703 1052 aa17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 CCDC85BQ15834 202 aaPredicted RBP17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 USP17L6PQ6QN14 398 aa17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 FCHSD1Q86WN1 690 aa17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 ZFP91Q96JP5 570 aaPredicted RBP17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 AIFM3Q96NN9 605 aa17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 INPP4AQ96PE3 977 aaPredicted RBP17.13■□□□□ 0.33
CDC42SE1-205ENST00000491825 TET1Q8NFU7 2136 aa17.12■□□□□ 0.33
CDC42SE1-205ENST00000491825 SPDYE3A6NKU9 549 aa17.12■□□□□ 0.33
CDC42SE1-205ENST00000491825 SORBS3O60504 671 aa17.12■□□□□ 0.33
CDC42SE1-205ENST00000491825 PARNO95453 639 aaKnown RBP17.12■□□□□ 0.33
CDC42SE1-205ENST00000491825 FOSP01100 380 aaPredicted RBP17.12■□□□□ 0.33
CDC42SE1-205ENST00000491825 ICAM3P32942 547 aa17.12■□□□□ 0.33
CDC42SE1-205ENST00000491825 ZNF200P98182 395 aaPredicted RBP17.12■□□□□ 0.33
CDC42SE1-205ENST00000491825 UBE2SQ16763 222 aa17.12■□□□□ 0.33
CDC42SE1-205ENST00000491825 REXO1Q8N1G1 1221 aaKnown RBP17.12■□□□□ 0.33
CDC42SE1-205ENST00000491825 PHF20Q9BVI0 1012 aa17.12■□□□□ 0.33
CDC42SE1-205ENST00000491825 BCAS3Q9H6U6 928 aa17.12■□□□□ 0.33
CDC42SE1-205ENST00000491825 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.12■□□□□ 0.33
CDC42SE1-205ENST00000491825 RFXAPO00287 272 aa17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 NLRP5P59047 1200 aa17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 DEFB103AP81534 67 aa17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 SEMA3FQ13275 785 aa17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 NPY5RQ15761 445 aa17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 ZNF618Q5T7W0 954 aa17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 CNKSR3Q6P9H4 555 aa17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 SPRED2Q7Z698 418 aa17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 HSCBQ8IWL3 235 aa17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 INTS4Q96HW7 963 aaKnown RBP17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 ASB2Q96Q27 587 aa17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 PCDHA4Q9UN74 947 aa17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 KIF3AQ9Y496 699 aa17.11■□□□□ 0.33
CDC42SE1-205ENST00000491825 STAM2O75886 525 aa17.1■□□□□ 0.33
CDC42SE1-205ENST00000491825 KCNJ6P48051 423 aa17.1■□□□□ 0.33
CDC42SE1-205ENST00000491825 MKRN4PQ13434 485 aaPredicted RBP17.1■□□□□ 0.33
CDC42SE1-205ENST00000491825 XRRA1Q6P2D8 792 aa17.1■□□□□ 0.33
CDC42SE1-205ENST00000491825 TMCO2Q7Z6W1 182 aaPredicted RBP17.1■□□□□ 0.33
CDC42SE1-205ENST00000491825 SERINC5Q86VE9 423 aa17.1■□□□□ 0.33
CDC42SE1-205ENST00000491825 EHMT1Q9H9B1 1298 aa17.1■□□□□ 0.33
CDC42SE1-205ENST00000491825 CERS4Q9HA82 394 aa17.1■□□□□ 0.33
CDC42SE1-205ENST00000491825 MTCH2Q9Y6C9 303 aa17.1■□□□□ 0.33
CDC42SE1-205ENST00000491825 LCHNA4D1U4 455 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 SPATA31C2B4DYI2 1134 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 KIF28PB7ZC32 967 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 M0R2N6 131 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 DTNBO60941 627 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 LGALS2P05162 132 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 TRIM29Q14134 588 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 GNPTABQ3T906 1256 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 PCNX4Q63HM2 1172 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 METTL7BQ6UX53 244 aa17.09■□□□□ 0.33
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