RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 LINC00271P0C7V0 271 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 SMIM10L2AP0DMW4 78 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 SMIM10L2BP0DMW5 78 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 LTBRP36941 435 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 SP2Q02086 613 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 PGM5Q15124 567 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 SMAD2Q15796 467 aaKnown RBP9.53□□□□□ -0.88
USP39-216ENST00000490193 HERC4Q5GLZ8 1057 aaPredicted RBP9.53□□□□□ -0.88
USP39-216ENST00000490193 FAM26DQ5JW98 314 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 FBXL18Q96ME1 805 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 UIMC1Q96RL1 719 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 ZSCAN10Q96SZ4 725 aaPredicted RBP9.53□□□□□ -0.88
USP39-216ENST00000490193 RNPEPQ9H4A4 650 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 TUT1Q9H6E5 874 aaKnown RBP9.53□□□□□ -0.88
USP39-216ENST00000490193 RC3H2Q9HBD1 1191 aaKnown RBP9.53□□□□□ -0.88
USP39-216ENST00000490193 KAT6AQ92794 2004 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 KIAA1671Q9BY89 1806 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 RBAK-RBAKDNI3L0D1 243 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 TREHO43280 583 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 PPP1R11O60927 126 aaPredicted RBP9.52□□□□□ -0.89
USP39-216ENST00000490193 TECTAO75443 2155 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 LGALS2P05162 132 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 MYCLP12524 364 aaPredicted RBP9.52□□□□□ -0.89
USP39-216ENST00000490193 ICAM3P32942 547 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 IRS1P35568 1242 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 TTC3P53804 2025 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 ADAM17P78536 824 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 ANKRD45Q5TZF3 282 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 DIEXFQ68CQ4 756 aaKnown RBP9.52□□□□□ -0.89
USP39-216ENST00000490193 RPAINQ86UA6 219 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 IL31RAQ8NI17 732 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 CLP1Q92989 425 aaKnown RBP9.52□□□□□ -0.89
USP39-216ENST00000490193 POP1Q99575 1024 aaKnown RBP9.52□□□□□ -0.89
USP39-216ENST00000490193 C11orf84Q9BUA3 381 aaPredicted RBP9.52□□□□□ -0.89
USP39-216ENST00000490193 USP26Q9BXU7 913 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 IFIH1Q9BYX4 1025 aaKnown RBP9.52□□□□□ -0.89
USP39-216ENST00000490193 OSBPL7Q9BZF2 842 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 CLDND1Q9NY35 253 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 ZSWIM5Q9P217 1185 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 RWDD3Q9Y3V2 267 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 FRMPD4Q14CM0 1322 aa9.52□□□□□ -0.89
USP39-216ENST00000490193 B4E1Z4 1266 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 ZBTB5O15062 677 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 MBTPS2O43462 519 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 DHX16O60231 1041 aaKnown RBP9.51□□□□□ -0.89
USP39-216ENST00000490193 STAM2O75886 525 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 UPP2O95045 317 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 GNAT1P11488 350 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 SDSP20132 328 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 CCND2P30279 289 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 BMPR1AP36894 532 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 HYAL1Q12794 435 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 TRAF1Q13077 416 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 HDAC1Q13547 482 aaPredicted RBP9.51□□□□□ -0.89
USP39-216ENST00000490193 METTL7BQ6UX53 244 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 HFE2Q6ZVN8 426 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 BMP8AQ7Z5Y6 402 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 STAG2Q8N3U4 1231 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 FIBCD1Q8N539 461 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 GPKOWQ92917 476 aaPredicted RBP eCLIP9.51□□□□□ -0.89
USP39-216ENST00000490193 IL17RAQ96F46 866 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 MFSD14AQ96MC6 490 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 INPP4AQ96PE3 977 aaPredicted RBP9.51□□□□□ -0.89
USP39-216ENST00000490193 MLXIPQ9HAP2 919 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 VAT1LQ9HCJ6 419 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 PCDHA1Q9Y5I3 950 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 USP34Q70CQ2 3546 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 ADGRA3Q8IWK6 1321 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 KMT2EQ8IZD2 1858 aa9.51□□□□□ -0.89
USP39-216ENST00000490193 PALM3A6NDB9 673 aaPredicted RBP9.5□□□□□ -0.89
USP39-216ENST00000490193 TRIM6-TRIM34B2RNG4 842 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 KLRF2D3W0D1 207 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 GRM6O15303 877 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 MMP1P03956 469 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 CTSHP09668 335 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 HOXA13P31271 388 aaPredicted RBP9.5□□□□□ -0.89
USP39-216ENST00000490193 CTNNB1P35222 781 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 MRPS9P82933 396 aaKnown RBP9.5□□□□□ -0.89
USP39-216ENST00000490193 SMAD4Q13485 552 aaKnown RBP9.5□□□□□ -0.89
USP39-216ENST00000490193 NEDD9Q14511 834 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 SEC23AQ15436 765 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 GNPTABQ3T906 1256 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 ZNF689Q96CS4 500 aaPredicted RBP9.5□□□□□ -0.89
USP39-216ENST00000490193 GPR20Q99678 358 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 DSCC1Q9BVC3 393 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 KRT23Q9C075 422 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 BCAS3Q9H6U6 928 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 CNNM2Q9H8M5 875 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 EHMT1Q9H9B1 1298 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 SETD4Q9NVD3 440 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 MAD2L2Q9UI95 211 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 ZNF215Q9UL58 517 aaPredicted RBP9.5□□□□□ -0.89
USP39-216ENST00000490193 NRCAMQ92823 1304 aa9.5□□□□□ -0.89
USP39-216ENST00000490193 BAZ2BQ9UIF8 2168 aaKnown RBP9.49□□□□□ -0.89
USP39-216ENST00000490193 SPATA31C2B4DYI2 1134 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 GCOM1H8Y6P7 765 aaPredicted RBP9.49□□□□□ -0.89
USP39-216ENST00000490193 NOP56O00567 594 aaKnown RBP9.49□□□□□ -0.89
USP39-216ENST00000490193 FIBPO43427 364 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 SORBS3O60504 671 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 TBX10O75333 385 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms