RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 CMIPQ8IY22 773 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 CPA6Q8N4T0 437 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 CISD2Q8N5K1 135 aaKnown RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 DAGLBQ8NCG7 672 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 C1orf162Q8NEQ5 155 aaPredicted RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 ENOX1Q8TC92 643 aaKnown RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 LENG1Q96BZ8 264 aaPredicted RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 TIFAQ96CG3 184 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 FAXDC2Q96IV6 333 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 HEXIM2Q96MH2 286 aaKnown RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 ALG1Q9BT22 464 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 YIPF2Q9BWQ6 316 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 DUSP15Q9H1R2 295 aaPredicted RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 C19orf44Q9H6X5 657 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 TCF7L1Q9HCS4 588 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 PRDM5Q9NQX1 630 aaPredicted RBP4.28□□□□□ -1.72
GPNMB-212ENST00000487890 ENAMQ9NRM1 1142 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 OXSMQ9NWU1 459 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 USP21Q9UK80 565 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 ZBTB21Q9ULJ3 1066 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 CBLCQ9ULV8 474 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 PCDHA2Q9Y5H9 948 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 COMMD10Q9Y6G5 202 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 NALCNQ8IZF0 1738 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 PTPRUQ92729 1446 aa4.28□□□□□ -1.72
GPNMB-212ENST00000487890 PIK3R4Q99570 1358 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 FAM95CA0A1B0GW59 222 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 WASH4PA8MWX3 477 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 GNB5O14775 395 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 WNT9AO14904 365 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 PCDHGA12O60330 932 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 ULK1O75385 1050 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 SNUPNO95149 360 aaKnown RBP4.27□□□□□ -1.73
GPNMB-212ENST00000487890 GSTM1P09488 218 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 FAM87AP0C7U9 286 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 SRFP11831 508 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 BMP8BP34820 402 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 SESN3P58005 492 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 FAPQ12884 760 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 KCNAB2Q13303 367 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 OS9Q13438 667 aaPredicted RBP4.27□□□□□ -1.73
GPNMB-212ENST00000487890 CLEC16AQ2KHT3 1053 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 KIZQ2M2Z5 673 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 PRRT3Q5FWE3 981 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 BROXQ5VW32 411 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 ZNF385CQ66K41 422 aaPredicted RBP4.27□□□□□ -1.73
GPNMB-212ENST00000487890 IQCEQ6IPM2 695 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 TSHZ1Q6ZSZ6 1077 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 C16orf59Q7L2K0 433 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 C11orf74Q86VG3 221 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 KSR1Q8IVT5 923 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 ARMC10Q8N2F6 343 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 SAMD3Q8N6K7 520 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 USHBP1Q8N6Y0 703 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 ZNF655Q8N720 491 aaPredicted RBP4.27□□□□□ -1.73
GPNMB-212ENST00000487890 C2orf69Q8N8R5 385 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 USP33Q8TEY7 942 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 WFDC12Q8WWY7 111 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 SLC5A5Q92911 643 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 FBXW5Q969U6 566 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 COX4I2Q96KJ9 171 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 MMP19Q99542 508 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 PCGF6Q9BYE7 350 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 GPR62Q9BZJ7 368 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 SLC13A1Q9BZW2 595 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 ZNF700Q9H0M5 742 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 CATSPERZQ9NTU4 200 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 GPATCH2Q9NW75 528 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 C14orf119Q9NWQ9 140 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 STK26Q9P289 416 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 FBXL7Q9UJT9 491 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 ANKRD6Q9Y2G4 727 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 PCDHGA9Q9Y5G4 932 aaKnown RBP4.27□□□□□ -1.73
GPNMB-212ENST00000487890 PCDHGA8Q9Y5G5 932 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 PCDHGA7Q9Y5G6 932 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 PCDHGA6Q9Y5G7 932 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 PCDHGA3Q9Y5H0 932 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 PCDHGA2Q9Y5H1 932 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 CAPN6Q9Y6Q1 641 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 COL16A1Q07092 1604 aaPredicted RBP4.27□□□□□ -1.73
GPNMB-212ENST00000487890 CCDC144AA2RUR9 1427 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 METP08581 1390 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 JCADQ9P266 1359 aa4.27□□□□□ -1.73
GPNMB-212ENST00000487890 SHPRHQ149N8 1683 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 CREB3O43889 395 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 H2AFYO75367 372 aaKnown RBP4.26□□□□□ -1.73
GPNMB-212ENST00000487890 ARHGEF15O94989 841 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 ZNF205O95201 554 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 LTFP02788 710 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 SYPP08247 313 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 CT47B1P0C2W7 299 aaPredicted RBP4.26□□□□□ -1.73
GPNMB-212ENST00000487890 RBP3P10745 1247 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 RECQLP46063 649 aaPredicted RBP4.26□□□□□ -1.73
GPNMB-212ENST00000487890 ST5P78524 1137 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 OCRLQ01968 901 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 DDB1Q16531 1140 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 FAM47CQ5HY64 1035 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 EPM2AIP1Q7L775 607 aaPredicted RBP4.26□□□□□ -1.73
GPNMB-212ENST00000487890 OTOP1Q7RTM1 612 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms