RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 GRK2P25098 689 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 GRK3P35626 688 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 MLLT6P55198 1093 aaPredicted RBP6.09□□□□□ -1.43
UBR3-211ENST00000487689 GRIN1Q05586 938 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 IFRD2Q12894 506 aaPredicted RBP6.09□□□□□ -1.43
UBR3-211ENST00000487689 NFATC3Q12968 1075 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 DDR2Q16832 855 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 HS1BP3Q53T59 392 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 PALM2Q8IXS6 379 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 LRRC47Q8N1G4 583 aaKnown RBP6.09□□□□□ -1.43
UBR3-211ENST00000487689 C1orf159Q96HA4 380 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 ZFYVE21Q9BQ24 234 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 PPP1R1BQ9UD71 204 aaPredicted RBP6.09□□□□□ -1.43
UBR3-211ENST00000487689 CHGBP05060 677 aa6.08□□□□□ -1.44
UBR3-211ENST00000487689 GRIA2P42262 883 aa6.08□□□□□ -1.44
UBR3-211ENST00000487689 SLFN13Q68D06 897 aa6.08□□□□□ -1.44
UBR3-211ENST00000487689 DENND5AQ6IQ26 1287 aa6.08□□□□□ -1.44
UBR3-211ENST00000487689 NSMFQ6X4W1 530 aa6.08□□□□□ -1.44
UBR3-211ENST00000487689 RALYLQ86SE5 291 aaKnown RBP6.08□□□□□ -1.44
UBR3-211ENST00000487689 IFNL3Q8IZI9 196 aa6.08□□□□□ -1.44
UBR3-211ENST00000487689 KCNJ15Q99712 375 aa6.08□□□□□ -1.44
UBR3-211ENST00000487689 CD248Q9HCU0 757 aa6.08□□□□□ -1.44
UBR3-211ENST00000487689 PPP4R1LQ9P1A2 415 aa6.08□□□□□ -1.44
UBR3-211ENST00000487689 TRAV20A0A0B4J274 112 aa6.07□□□□□ -1.44
UBR3-211ENST00000487689 FAM47E-STBD1D6RA91 191 aa6.07□□□□□ -1.44
UBR3-211ENST00000487689 DLX3O60479 287 aa6.07□□□□□ -1.44
UBR3-211ENST00000487689 ENO2P09104 434 aaPredicted RBP6.07□□□□□ -1.44
UBR3-211ENST00000487689 TUSC3Q13454 348 aa6.07□□□□□ -1.44
UBR3-211ENST00000487689 SMAD2Q15796 467 aaKnown RBP6.07□□□□□ -1.44
UBR3-211ENST00000487689 ZNF585AQ6P3V2 769 aa6.07□□□□□ -1.44
UBR3-211ENST00000487689 OTOP3Q7RTS5 596 aa6.07□□□□□ -1.44
UBR3-211ENST00000487689 MCF2L2Q86YR7 1114 aa6.07□□□□□ -1.44
UBR3-211ENST00000487689 HSPBP1Q9NZL4 362 aa6.07□□□□□ -1.44
UBR3-211ENST00000487689 ARHGAP20Q9P2F6 1191 aa6.07□□□□□ -1.44
UBR3-211ENST00000487689 DSEQ9UL01 958 aa6.07□□□□□ -1.44
UBR3-211ENST00000487689 ERCC6Q03468 1493 aa6.07□□□□□ -1.44
UBR3-211ENST00000487689 FGFR1P11362 822 aa6.06□□□□□ -1.44
UBR3-211ENST00000487689 PABPC1P11940 636 aaKnown RBP6.06□□□□□ -1.44
UBR3-211ENST00000487689 EPHB4P54760 987 aa6.06□□□□□ -1.44
UBR3-211ENST00000487689 GPR85P60893 370 aa6.06□□□□□ -1.44
UBR3-211ENST00000487689 PAN2Q504Q3 1202 aaKnown RBP6.06□□□□□ -1.44
UBR3-211ENST00000487689 PKN3Q6P5Z2 889 aa6.06□□□□□ -1.44
UBR3-211ENST00000487689 LBX2Q6XYB7 198 aa6.06□□□□□ -1.44
UBR3-211ENST00000487689 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.06□□□□□ -1.44
UBR3-211ENST00000487689 ST13P5Q8NFI4 369 aaPredicted RBP6.06□□□□□ -1.44
UBR3-211ENST00000487689 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.06□□□□□ -1.44
UBR3-211ENST00000487689 IGDCC4Q8TDY8 1250 aa6.06□□□□□ -1.44
UBR3-211ENST00000487689 ZCCHC14Q8WYQ9 949 aaKnown RBP6.06□□□□□ -1.44
UBR3-211ENST00000487689 TINF2Q9BSI4 451 aa6.06□□□□□ -1.44
UBR3-211ENST00000487689 SEMA4AQ9H3S1 761 aa6.06□□□□□ -1.44
UBR3-211ENST00000487689 C11orf21Q9P2W6 132 aa6.06□□□□□ -1.44
UBR3-211ENST00000487689 CKMP06732 381 aa6.05□□□□□ -1.44
UBR3-211ENST00000487689 FAHP16930 419 aa6.05□□□□□ -1.44
UBR3-211ENST00000487689 GLRBP48167 497 aa6.05□□□□□ -1.44
UBR3-211ENST00000487689 DPP8Q6V1X1 898 aaPredicted RBP6.05□□□□□ -1.44
UBR3-211ENST00000487689 CKAP2LQ8IYA6 745 aa6.05□□□□□ -1.44
UBR3-211ENST00000487689 DTX3Q8N9I9 347 aa6.05□□□□□ -1.44
UBR3-211ENST00000487689 SLC43A3Q8NBI5 491 aa6.05□□□□□ -1.44
UBR3-211ENST00000487689 UHMK1Q8TAS1 419 aaKnown RBP6.05□□□□□ -1.44
UBR3-211ENST00000487689 CDC6Q99741 560 aa6.05□□□□□ -1.44
UBR3-211ENST00000487689 SHROOM4Q9ULL8 1493 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 H0Y858 1186 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 MSCO60682 206 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 SOD2P04179 222 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 COL6A2P12110 1019 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 NAT1P18440 290 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 TGFB2P61812 414 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 SKIDA1Q1XH10 827 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 Q6ZUG5 572 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 NLGN4XQ8N0W4 816 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 CELF2-AS1Q8N7Q2 184 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 GIMAP8Q8ND71 665 aaPredicted RBP6.04□□□□□ -1.44
UBR3-211ENST00000487689 WDR48Q8TAF3 677 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 ZFP69BQ9UJL9 534 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 ADAM29Q9UKF5 820 aa6.04□□□□□ -1.44
UBR3-211ENST00000487689 AQP7O14520 342 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 MUSKO15146 869 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 GPR42O15529 346 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 STK10O94804 968 aaKnown RBP6.03□□□□□ -1.44
UBR3-211ENST00000487689 SELENOPP49908 381 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 FHL2Q14192 279 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 STYK1Q6J9G0 422 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 KCNT2Q6UVM3 1135 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 KCTD1Q719H9 257 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 MTDHQ86UE4 582 aaKnown RBP6.03□□□□□ -1.44
UBR3-211ENST00000487689 REXO1L1PQ8IX06 675 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 DNERQ8NFT8 737 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 CLEC4DQ8WXI8 215 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 MBD6Q96DN6 1003 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 ARHGAP28Q9P2N2 729 aa6.03□□□□□ -1.44
UBR3-211ENST00000487689 PPARGC1AQ9UBK2 798 aaKnown RBP6.03□□□□□ -1.44
UBR3-211ENST00000487689 GSTA4O15217 222 aa6.02□□□□□ -1.45
UBR3-211ENST00000487689 PFKPQ01813 784 aa6.02□□□□□ -1.45
UBR3-211ENST00000487689 R3HDM1Q15032 1099 aaKnown RBP6.02□□□□□ -1.45
UBR3-211ENST00000487689 SPDYAQ5MJ70 313 aa6.02□□□□□ -1.45
UBR3-211ENST00000487689 RBM12BQ8IXT5 1001 aaKnown RBP6.02□□□□□ -1.45
UBR3-211ENST00000487689 STPG3Q8N7X2 389 aa6.02□□□□□ -1.45
UBR3-211ENST00000487689 NUDT10Q8NFP7 164 aa6.02□□□□□ -1.45
UBR3-211ENST00000487689 ZNF669Q96BR6 464 aaPredicted RBP6.02□□□□□ -1.45
UBR3-211ENST00000487689 NUDT11Q96G61 164 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms