RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 TGFB3P10600 412 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 U2AF2P26368 475 aaKnown RBP eCLIP12.13□□□□□ -0.47
TOP3B-216ENST00000487485 ICAM3P32942 547 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 CIITAP33076 1130 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 CYP2C18P33260 490 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 MTMR1Q13613 665 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 LY6KQ17RY6 165 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 LETM2Q2VYF4 491 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 DUSP28Q4G0W2 176 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 CCDC62Q6P9F0 684 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 NEK8Q86SG6 692 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 TMEM199Q8N511 208 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 GPRASP2Q96D09 838 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 FAM122AQ96E09 287 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 NKX2-4Q9H2Z4 354 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 MSRAQ9UJ68 235 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 DDX41Q9UJV9 622 aaKnown RBP12.13□□□□□ -0.47
TOP3B-216ENST00000487485 GNEQ9Y223 722 aaKnown RBP12.13□□□□□ -0.47
TOP3B-216ENST00000487485 IGLV3-22A0A075B6J6 115 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 MEIS1O00470 390 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 NKRFO15226 690 aaKnown RBP eCLIP12.12□□□□□ -0.47
TOP3B-216ENST00000487485 STX6O43752 255 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 ARP10275 920 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 CST5P28325 142 aaPredicted RBP12.12□□□□□ -0.47
TOP3B-216ENST00000487485 SP2Q02086 613 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 SEMA3FQ13275 785 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 GNASQ5JWF2 1037 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 NIPA1Q7RTP0 329 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 PLA2G4DQ86XP0 818 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 FAM126BQ8IXS8 530 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 HERVK_113Q902F9 699 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 COPS5Q92905 334 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 CDHR1Q96JP9 859 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 KCNH7Q9NS40 1196 aa12.12□□□□□ -0.47
TOP3B-216ENST00000487485 YBX2Q9Y2T7 364 aaKnown RBP12.12□□□□□ -0.47
TOP3B-216ENST00000487485 RBM19Q9Y4C8 960 aaKnown RBP12.12□□□□□ -0.47
TOP3B-216ENST00000487485 MROH7Q68CQ1 1323 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 MUC6Q6W4X9 2439 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 CYP3A7-CYP3A51PA0A087WV96 503 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 A0A0U1RQG5 324 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-216ENST00000487485 CTAGE5O15320 804 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 DYNC1LI2O43237 492 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-216ENST00000487485 CCNT1O60563 726 aaKnown RBP12.11□□□□□ -0.47
TOP3B-216ENST00000487485 ATP9AO75110 1047 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 TDP2O95551 362 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 BMP1P13497 986 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 ATP2B1P20020 1258 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 PTGS1P23219 599 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 CYP3A7P24462 503 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 GJA9P57773 515 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 RAB30Q15771 203 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 Q4G0T1 1027 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 PRR16Q569H4 304 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 PPP4R3AQ6IN85 833 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 PSRC1Q6PGN9 363 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-216ENST00000487485 MOXD1Q6UVY6 613 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 PCSK9Q8NBP7 692 aaKnown RBP12.11□□□□□ -0.47
TOP3B-216ENST00000487485 NAP1L4Q99733 375 aaKnown RBP12.11□□□□□ -0.47
TOP3B-216ENST00000487485 UPF3AQ9H1J1 476 aaKnown RBP12.11□□□□□ -0.47
TOP3B-216ENST00000487485 IL23AQ9NPF7 189 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 DAXXQ9UER7 740 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-216ENST00000487485 Q9Y3F1 56 aa12.11□□□□□ -0.47
TOP3B-216ENST00000487485 GBF1Q92538 1859 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 TRANK1O15050 2925 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 GGPS1O95749 300 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 GH1P01241 217 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 CD4P01730 458 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 FGBP02675 491 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 PDIA4P13667 645 aaKnown RBP12.1□□□□□ -0.47
TOP3B-216ENST00000487485 RABGGTBP53611 331 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 BEX3Q00994 111 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 SETQ01105 290 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-216ENST00000487485 NEDD9Q14511 834 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 OTOP2Q7RTS6 562 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 TLK2Q86UE8 772 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 FERMT3Q86UX7 667 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 DHX37Q8IY37 1157 aaKnown RBP12.1□□□□□ -0.47
TOP3B-216ENST00000487485 GIMAP8Q8ND71 665 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-216ENST00000487485 OR6J1Q8NGC5 347 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 LENG9Q96B70 501 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 MBOAT7Q96N66 472 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 UIMC1Q96RL1 719 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 SENP7Q9BQF6 1050 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 AP5M1Q9H0R1 490 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 BCAS3Q9H6U6 928 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 MLXIPQ9HAP2 919 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 SLC28A3Q9HAS3 691 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 SPC25Q9HBM1 224 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 AGO4Q9HCK5 861 aaKnown RBP12.1□□□□□ -0.47
TOP3B-216ENST00000487485 PKD2L1Q9P0L9 805 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 DDX25Q9UHL0 483 aaKnown RBP12.1□□□□□ -0.47
TOP3B-216ENST00000487485 NOL7Q9UMY1 257 aaKnown RBP12.1□□□□□ -0.47
TOP3B-216ENST00000487485 MTMR6Q9Y217 621 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 UMODL1Q5DID0 1318 aa12.1□□□□□ -0.47
TOP3B-216ENST00000487485 MYH15Q9Y2K3 1946 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 WNT7AO00755 349 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 TLR3O15455 904 aaKnown RBP12.09□□□□□ -0.47
TOP3B-216ENST00000487485 MSH4O15457 936 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms