RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 CACNA1AO00555 2505 aa17.7■□□□□ 0.42
NME1-208ENST00000487481 NOP56O00567 594 aaKnown RBP17.7■□□□□ 0.42
NME1-208ENST00000487481 OPLAHO14841 1288 aa17.7■□□□□ 0.42
NME1-208ENST00000487481 DHX16O60231 1041 aaKnown RBP17.7■□□□□ 0.42
NME1-208ENST00000487481 NT5C2P49902 561 aa17.7■□□□□ 0.42
NME1-208ENST00000487481 PGM5Q15124 567 aa17.7■□□□□ 0.42
NME1-208ENST00000487481 TBC1D10CQ8IV04 446 aa17.7■□□□□ 0.42
NME1-208ENST00000487481 SETD4Q9NVD3 440 aa17.7■□□□□ 0.42
NME1-208ENST00000487481 USP15Q9Y4E8 981 aaPredicted RBP17.7■□□□□ 0.42
NME1-208ENST00000487481 GHRP10912 638 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 CCND2P30279 289 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 AVPR2P30518 371 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 ICAM3P32942 547 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 NUBP1P53384 320 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 ADAM17P78536 824 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 CCDC178Q5BJE1 867 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 ADGRD2Q7Z7M1 963 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 SAMD3Q8N6K7 520 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 IL31RAQ8NI17 732 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 EVI5LQ96CN4 794 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 ZKSCAN3Q9BRR0 538 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 AMNQ9BXJ7 453 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 KAT14Q9H8E8 782 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 EHMT1Q9H9B1 1298 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 JMJD4Q9H9V9 463 aa17.69■□□□□ 0.42
NME1-208ENST00000487481 ZNF215Q9UL58 517 aaPredicted RBP17.69■□□□□ 0.42
NME1-208ENST00000487481 DCHS1Q96JQ0 3298 aa17.68■□□□□ 0.42
NME1-208ENST00000487481 LAMA4Q16363 1823 aa17.68■□□□□ 0.42
NME1-208ENST00000487481 PROB1E7EW31 1015 aa17.68■□□□□ 0.42
NME1-208ENST00000487481 DGKIO75912 1065 aa17.68■□□□□ 0.42
NME1-208ENST00000487481 GLP2RO95838 553 aa17.68■□□□□ 0.42
NME1-208ENST00000487481 CHRNA1P02708 482 aa17.68■□□□□ 0.42
NME1-208ENST00000487481 DNAJB1P25685 340 aa17.68■□□□□ 0.42
NME1-208ENST00000487481 ARHGAP4P98171 946 aa17.68■□□□□ 0.42
NME1-208ENST00000487481 MCMDC2Q4G0Z9 681 aa17.68■□□□□ 0.42
NME1-208ENST00000487481 IQCA1Q86XH1 822 aa17.68■□□□□ 0.42
NME1-208ENST00000487481 LMBR1Q8WVP7 490 aa17.68■□□□□ 0.42
NME1-208ENST00000487481 GPKOWQ92917 476 aaPredicted RBP eCLIP17.68■□□□□ 0.42
NME1-208ENST00000487481 NEDD4P46934 1319 aa17.68■□□□□ 0.42
NME1-208ENST00000487481 DOCK5Q9H7D0 1870 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 DMDP11532 3685 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 A0A0D9SFI3 127 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 ENPP3O14638 875 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 ITGB1P05556 798 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 PARP1P09874 1014 aaKnown RBP17.67■□□□□ 0.42
NME1-208ENST00000487481 ATF7P17544 494 aaPredicted RBP17.67■□□□□ 0.42
NME1-208ENST00000487481 NRIP1P48552 1158 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 LPIN1Q14693 890 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 C20orf194Q5TEA3 1177 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 TAF2Q6P1X5 1199 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 METTL7BQ6UX53 244 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 CMTR2Q8IYT2 770 aaKnown RBP17.67■□□□□ 0.42
NME1-208ENST00000487481 SPPL3Q8TCT6 385 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 RPGRIP1Q96KN7 1286 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 FAM227BQ96M60 508 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 VAT1LQ9HCJ6 419 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 BARX2Q9UMQ3 279 aaPredicted RBP17.67■□□□□ 0.42
NME1-208ENST00000487481 MRPL42Q9Y6G3 142 aaKnown RBP17.67■□□□□ 0.42
NME1-208ENST00000487481 NRCAMQ92823 1304 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 VPS13AQ96RL7 3174 aa17.67■□□□□ 0.42
NME1-208ENST00000487481 HOXA13P31271 388 aaPredicted RBP17.66■□□□□ 0.42
NME1-208ENST00000487481 MGAT3Q09327 533 aa17.66■□□□□ 0.42
NME1-208ENST00000487481 NEDD9Q14511 834 aa17.66■□□□□ 0.42
NME1-208ENST00000487481 PTPN21Q16825 1174 aa17.66■□□□□ 0.42
NME1-208ENST00000487481 GNPTABQ3T906 1256 aa17.66■□□□□ 0.42
NME1-208ENST00000487481 TRIM50Q86XT4 487 aa17.66■□□□□ 0.42
NME1-208ENST00000487481 POF1BQ8WVV4 589 aa17.66■□□□□ 0.42
NME1-208ENST00000487481 GPR20Q99678 358 aa17.66■□□□□ 0.42
NME1-208ENST00000487481 SALL3Q9BXA9 1300 aa17.66■□□□□ 0.42
NME1-208ENST00000487481 PLXNA4Q9HCM2 1894 aa17.65■□□□□ 0.42
NME1-208ENST00000487481 FSD2A1L4K1 749 aa17.65■□□□□ 0.42
NME1-208ENST00000487481 TRIM6-TRIM34B2RNG4 842 aa17.65■□□□□ 0.42
NME1-208ENST00000487481 H0Y858 1186 aa17.65■□□□□ 0.42
NME1-208ENST00000487481 ERMP1Q7Z2K6 904 aa17.65■□□□□ 0.42
NME1-208ENST00000487481 RSPH3Q86UC2 560 aa17.65■□□□□ 0.42
NME1-208ENST00000487481 ZNF589Q86UQ0 364 aaPredicted RBP17.65■□□□□ 0.42
NME1-208ENST00000487481 TICAM2Q86XR7 235 aa17.65■□□□□ 0.42
NME1-208ENST00000487481 KLHL23Q8NBE8 558 aa17.65■□□□□ 0.42
NME1-208ENST00000487481 SUSD6Q92537 303 aa17.65■□□□□ 0.42
NME1-208ENST00000487481 BCAS3Q9H6U6 928 aa17.65■□□□□ 0.42
NME1-208ENST00000487481 TLR9Q9NR96 1032 aa17.65■□□□□ 0.42
NME1-208ENST00000487481 GALR2O43603 387 aaPredicted RBP17.64■□□□□ 0.41
NME1-208ENST00000487481 STAM2O75886 525 aa17.64■□□□□ 0.41
NME1-208ENST00000487481 FBXO47Q5MNV8 452 aa17.64■□□□□ 0.41
NME1-208ENST00000487481 TSHZ1Q6ZSZ6 1077 aa17.64■□□□□ 0.41
NME1-208ENST00000487481 CYFIP1Q7L576 1253 aa17.64■□□□□ 0.41
NME1-208ENST00000487481 ASCL5Q7RTU5 278 aa17.64■□□□□ 0.41
NME1-208ENST00000487481 RBM23Q86U06 439 aaKnown RBP17.64■□□□□ 0.41
NME1-208ENST00000487481 NPAS4Q8IUM7 802 aa17.64■□□□□ 0.41
NME1-208ENST00000487481 ZFP91Q96JP5 570 aaPredicted RBP17.64■□□□□ 0.41
NME1-208ENST00000487481 INPP4AQ96PE3 977 aaPredicted RBP17.64■□□□□ 0.41
NME1-208ENST00000487481 RCAN3Q9UKA8 241 aa17.64■□□□□ 0.41
NME1-208ENST00000487481 PCDHA1Q9Y5I3 950 aa17.64■□□□□ 0.41
NME1-208ENST00000487481 GCOM1H8Y6P7 765 aaPredicted RBP17.63■□□□□ 0.41
NME1-208ENST00000487481 ZBTB5O15062 677 aa17.63■□□□□ 0.41
NME1-208ENST00000487481 PPP1R11O60927 126 aaPredicted RBP17.63■□□□□ 0.41
NME1-208ENST00000487481 KDM4AO75164 1064 aa17.63■□□□□ 0.41
NME1-208ENST00000487481 POLR2MP0CAP2 368 aa17.63■□□□□ 0.41
NME1-208ENST00000487481 RUFY4Q6ZNE9 571 aa17.63■□□□□ 0.41
NME1-208ENST00000487481 ENAHQ8N8S7 591 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms