RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SEPT1Q8WYJ6 367 aa18.44■□□□□ 0.54
DDR1-246ENST00000485023 SCLYQ96I15 445 aa18.44■□□□□ 0.54
DDR1-246ENST00000485023 ZSCAN31Q96LW9 406 aaPredicted RBP18.44■□□□□ 0.54
DDR1-246ENST00000485023 BACH2Q9BYV9 841 aa18.44■□□□□ 0.54
DDR1-246ENST00000485023 WNT8AQ9H1J5 351 aa18.44■□□□□ 0.54
DDR1-246ENST00000485023 ZNF215Q9UL58 517 aaPredicted RBP18.44■□□□□ 0.54
DDR1-246ENST00000485023 NFASCO94856 1347 aa18.44■□□□□ 0.54
DDR1-246ENST00000485023 RANBP2P49792 3224 aaKnown RBP18.44■□□□□ 0.54
DDR1-246ENST00000485023 CCDC194A0A1B0GVG4 234 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 RBAK-RBAKDNI3L0D1 243 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 IPO5O00410 1097 aaKnown RBP18.43■□□□□ 0.54
DDR1-246ENST00000485023 CCNE2O96020 404 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 SMIM10L2AP0DMW4 78 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 SMIM10L2BP0DMW5 78 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 ACRP10323 421 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 ACTR2P61160 394 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 TRIM29Q14134 588 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 SHHQ15465 462 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 PIK3AP1Q6ZUJ8 805 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 SESTD1Q86VW0 696 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 FAM177A1Q8N128 213 aaPredicted RBP18.43■□□□□ 0.54
DDR1-246ENST00000485023 TMEM199Q8N511 208 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 GLG1Q92896 1179 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 GJA10Q969M2 543 aa18.43■□□□□ 0.54
DDR1-246ENST00000485023 SH2B1Q9NRF2 756 aaPredicted RBP18.43■□□□□ 0.54
DDR1-246ENST00000485023 A0A1W2PPC1 479 aa18.42■□□□□ 0.54
DDR1-246ENST00000485023 FAM205CA6NFA0 338 aa18.42■□□□□ 0.54
DDR1-246ENST00000485023 CIITAP33076 1130 aa18.42■□□□□ 0.54
DDR1-246ENST00000485023 KRT2P35908 639 aa18.42■□□□□ 0.54
DDR1-246ENST00000485023 NR5A1Q13285 461 aa18.42■□□□□ 0.54
DDR1-246ENST00000485023 LENG9Q96B70 501 aa18.42■□□□□ 0.54
DDR1-246ENST00000485023 CTAGE1Q96RT6 745 aa18.42■□□□□ 0.54
DDR1-246ENST00000485023 BRMS1Q9HCU9 246 aa18.42■□□□□ 0.54
DDR1-246ENST00000485023 C17orf102A2RUQ5 167 aa18.41■□□□□ 0.54
DDR1-246ENST00000485023 SOX1O00570 391 aaPredicted RBP18.41■□□□□ 0.54
DDR1-246ENST00000485023 USP11P51784 963 aa18.41■□□□□ 0.54
DDR1-246ENST00000485023 LETM2Q2VYF4 491 aa18.41■□□□□ 0.54
DDR1-246ENST00000485023 EARS2Q5JPH6 523 aaKnown RBP18.41■□□□□ 0.54
DDR1-246ENST00000485023 KRT40Q6A162 431 aa18.41■□□□□ 0.54
DDR1-246ENST00000485023 DHX38Q92620 1227 aaKnown RBP18.41■□□□□ 0.54
DDR1-246ENST00000485023 PCYT2Q99447 389 aa18.41■□□□□ 0.54
DDR1-246ENST00000485023 RNPEPQ9H4A4 650 aa18.41■□□□□ 0.54
DDR1-246ENST00000485023 SETD4Q9NVD3 440 aa18.41■□□□□ 0.54
DDR1-246ENST00000485023 MSH4O15457 936 aa18.4■□□□□ 0.54
DDR1-246ENST00000485023 DHX15O43143 795 aaKnown RBP18.4■□□□□ 0.54
DDR1-246ENST00000485023 CHMP2AO43633 222 aa18.4■□□□□ 0.54
DDR1-246ENST00000485023 MMP1P03956 469 aa18.4■□□□□ 0.54
DDR1-246ENST00000485023 FXR1P51114 621 aaKnown RBP eCLIP18.4■□□□□ 0.54
DDR1-246ENST00000485023 PPIGQ13427 754 aaKnown RBP eCLIP18.4■□□□□ 0.54
DDR1-246ENST00000485023 DIS3L2Q8IYB7 885 aaKnown RBP18.4■□□□□ 0.54
DDR1-246ENST00000485023 RETREG2Q8NC44 543 aa18.4■□□□□ 0.54
DDR1-246ENST00000485023 ATP6V0A1Q93050 837 aa18.4■□□□□ 0.54
DDR1-246ENST00000485023 WNT8BQ93098 351 aa18.4■□□□□ 0.54
DDR1-246ENST00000485023 LLPHQ9BRT6 129 aaKnown RBP18.4■□□□□ 0.54
DDR1-246ENST00000485023 AZI2Q9H6S1 392 aa18.4■□□□□ 0.54
DDR1-246ENST00000485023 TCEAL9Q9UHQ7 104 aa18.4■□□□□ 0.54
DDR1-246ENST00000485023 EMSYQ7Z589 1322 aa18.4■□□□□ 0.54
DDR1-246ENST00000485023 TRIOBPQ9H2D6 2365 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 BACH1O14867 736 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 BFSP2Q13515 415 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 DEFB128Q7Z7B8 93 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 CCDC155Q8N6L0 562 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 FAM184AQ8NB25 1140 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 LMBR1Q8WVP7 490 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 LRCH3Q96II8 777 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 TMX3Q96JJ7 454 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 RNPC3Q96LT9 517 aaKnown RBP18.39■□□□□ 0.53
DDR1-246ENST00000485023 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.39■□□□□ 0.539e-7■■■□□ 15.1
DDR1-246ENST00000485023 SMARCAD1Q9H4L7 1026 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 TBC1D22BQ9NU19 505 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 ERAP1Q9NZ08 941 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 DDX25Q9UHL0 483 aaKnown RBP18.39■□□□□ 0.53
DDR1-246ENST00000485023 TRPC6Q9Y210 931 aa18.39■□□□□ 0.53
DDR1-246ENST00000485023 BTBD18B2RXH4 712 aa18.38■□□□□ 0.53
DDR1-246ENST00000485023 TREHO43280 583 aa18.38■□□□□ 0.53
DDR1-246ENST00000485023 SLC37A4O43826 429 aa18.38■□□□□ 0.53
DDR1-246ENST00000485023 LGR5O75473 907 aa18.38■□□□□ 0.53
DDR1-246ENST00000485023 IGBP1P78318 339 aa18.38■□□□□ 0.53
DDR1-246ENST00000485023 PPFIA1Q13136 1202 aa18.38■□□□□ 0.53
DDR1-246ENST00000485023 LRCH2Q5VUJ6 765 aa18.38■□□□□ 0.53
DDR1-246ENST00000485023 C16orf59Q7L2K0 433 aa18.38■□□□□ 0.53
DDR1-246ENST00000485023 NEK8Q86SG6 692 aa18.38■□□□□ 0.53
DDR1-246ENST00000485023 C8orf76Q96K31 380 aa18.38■□□□□ 0.53
DDR1-246ENST00000485023 IL23AQ9NPF7 189 aa18.38■□□□□ 0.53
DDR1-246ENST00000485023 SAMM50Q9Y512 469 aa18.38■□□□□ 0.53
DDR1-246ENST00000485023 PITPNM1O00562 1244 aa18.37■□□□□ 0.53
DDR1-246ENST00000485023 CCNT1O60563 726 aaKnown RBP18.37■□□□□ 0.53
DDR1-246ENST00000485023 GAS7O60861 476 aa18.37■□□□□ 0.53
DDR1-246ENST00000485023 STAT5BP51692 787 aa18.37■□□□□ 0.53
DDR1-246ENST00000485023 HMGN5P82970 282 aaKnown RBP18.37■□□□□ 0.53
DDR1-246ENST00000485023 PTK7Q13308 1070 aa18.37■□□□□ 0.53
DDR1-246ENST00000485023 Q4G0T1 1027 aa18.37■□□□□ 0.53
DDR1-246ENST00000485023 MIS18BP1Q6P0N0 1132 aa18.37■□□□□ 0.53
DDR1-246ENST00000485023 ZNF365Q70YC5 407 aa18.37■□□□□ 0.53
DDR1-246ENST00000485023 TRMT1LQ7Z2T5 733 aaKnown RBP18.37■□□□□ 0.53
DDR1-246ENST00000485023 CCDC60Q8IWA6 550 aaPredicted RBP18.37■□□□□ 0.53
DDR1-246ENST00000485023 CAGE1Q8TC20 777 aa18.37■□□□□ 0.53
DDR1-246ENST00000485023 SLC5A5Q92911 643 aa18.37■□□□□ 0.53
DDR1-246ENST00000485023 TNFRSF25Q93038 417 aa18.37■□□□□ 0.53
DDR1-246ENST00000485023 ZBTB10Q96DT7 871 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms