RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 AGO4Q9HCK5 861 aaKnown RBP14□□□□□ -0.17
MSH5-216ENST00000484309 JPH1Q9HDC5 661 aaPredicted RBP14□□□□□ -0.17
MSH5-216ENST00000484309 SETD4Q9NVD3 440 aa14□□□□□ -0.17
MSH5-216ENST00000484309 ZNF215Q9UL58 517 aaPredicted RBP14□□□□□ -0.17
MSH5-216ENST00000484309 LAMA2P24043 3122 aaKnown RBP13.99□□□□□ -0.17
MSH5-216ENST00000484309 TREHO43280 583 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 PFKFB2O60825 505 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 PBX2P40425 430 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 NEK4P51957 841 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 SMAD3P84022 425 aaKnown RBP13.99□□□□□ -0.17
MSH5-216ENST00000484309 PTK7Q13308 1070 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 C8orf34Q49A92 452 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 ZNF697Q5TEC3 545 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 RASIP1Q5U651 963 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 LRRC8DQ7L1W4 858 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 TEX2Q8IWB9 1127 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 NECAB1Q8N987 351 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 CAGE1Q8TC20 777 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 BICD2Q8TD16 824 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 CRYGNQ8WXF5 182 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 SEPT1Q8WYJ6 367 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 HERVK_113Q902F9 699 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 ATP6V0A1Q93050 837 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 SDF4Q9BRK5 362 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 FTOQ9C0B1 505 aaKnown RBP eCLIP13.99□□□□□ -0.17
MSH5-216ENST00000484309 SLC9A2Q9UBY0 812 aa13.99□□□□□ -0.17
MSH5-216ENST00000484309 IGLV3-22A0A075B6J6 115 aa13.98□□□□□ -0.17
MSH5-216ENST00000484309 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.98□□□□□ -0.17
MSH5-216ENST00000484309 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.98□□□□□ -0.17
MSH5-216ENST00000484309 MEIS1O00470 390 aa13.98□□□□□ -0.17
MSH5-216ENST00000484309 MAFGO15525 162 aa13.98□□□□□ -0.17
MSH5-216ENST00000484309 CKBP12277 381 aa13.98□□□□□ -0.17
MSH5-216ENST00000484309 SELPP16109 830 aa13.98□□□□□ -0.17
MSH5-216ENST00000484309 TRIM71Q2Q1W2 868 aaKnown RBP13.98□□□□□ -0.17
MSH5-216ENST00000484309 ZNF618Q5T7W0 954 aa13.98□□□□□ -0.17
MSH5-216ENST00000484309 AFAP1L1Q8TED9 768 aa13.98□□□□□ -0.17
MSH5-216ENST00000484309 GLG1Q92896 1179 aa13.98□□□□□ -0.17
MSH5-216ENST00000484309 SH3GLB2Q9NR46 395 aa13.98□□□□□ -0.17
MSH5-216ENST00000484309 MTMR10Q9NXD2 777 aa13.98□□□□□ -0.17
MSH5-216ENST00000484309 KCNJ14Q9UNX9 436 aa13.98□□□□□ -0.17
MSH5-216ENST00000484309 NFASCO94856 1347 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 CDKL5O76039 1030 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 CTDNEP1O95476 244 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 CYP3A4P08684 503 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 CTSHP09668 335 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 DNAJB2P25686 324 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 RFC2P35250 354 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 THPOP40225 353 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 ACTR2P61160 394 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 ANKRD1Q15327 319 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 ME3Q16798 604 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 PRR16Q569H4 304 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 SERINC5Q86VE9 423 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 LMBR1Q8WVP7 490 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 IL17RAQ96F46 866 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 PCYT2Q99447 389 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 MTIF3Q9H2K0 278 aaKnown RBP13.97□□□□□ -0.17
MSH5-216ENST00000484309 TTYH1Q9H313 450 aaPredicted RBP13.97□□□□□ -0.17
MSH5-216ENST00000484309 GJB4Q9NTQ9 266 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 PCDHA4Q9UN74 947 aa13.97□□□□□ -0.17
MSH5-216ENST00000484309 EMSYQ7Z589 1322 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 EIF5BO60841 1220 aaKnown RBP13.96□□□□□ -0.17
MSH5-216ENST00000484309 NBNO60934 754 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 CCNE2O96020 404 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 PFKMP08237 780 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 ACTN1P12814 892 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 HOXC8P31273 242 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 FOSBP53539 338 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 RABGGTBP53611 331 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 IGBP1P78318 339 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 RBL2Q08999 1139 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 PPFIA1Q13136 1202 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 MBTPS1Q14703 1052 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 GPNMBQ14956 572 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 NPY5RQ15761 445 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 TCTN1Q2MV58 587 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 MCTP2Q6DN12 878 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 TRAF7Q6Q0C0 670 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 NIPA1Q7RTP0 329 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 BLIDQ8IZY5 108 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 ZBTB10Q96DT7 871 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 GUCD1Q96NT3 240 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 ZNF577Q9BSK1 485 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 PBX4Q9BYU1 374 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 SMARCAD1Q9H4L7 1026 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 ERAP1Q9NZ08 941 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 SLC4A7Q9Y6M7 1214 aa13.96□□□□□ -0.17
MSH5-216ENST00000484309 STK36Q9NRP7 1315 aa13.95□□□□□ -0.18
MSH5-216ENST00000484309 IPO5O00410 1097 aaKnown RBP13.95□□□□□ -0.18
MSH5-216ENST00000484309 DHX15O43143 795 aaKnown RBP13.95□□□□□ -0.18
MSH5-216ENST00000484309 EDIL3O43854 480 aa13.95□□□□□ -0.18
MSH5-216ENST00000484309 LGR5O75473 907 aa13.95□□□□□ -0.18
MSH5-216ENST00000484309 GRIK4Q16099 956 aa13.95□□□□□ -0.18
MSH5-216ENST00000484309 RUFY4Q6ZNE9 571 aa13.95□□□□□ -0.18
MSH5-216ENST00000484309 TBCKQ8TEA7 893 aa13.95□□□□□ -0.18
MSH5-216ENST00000484309 GTF3C6Q969F1 213 aa13.95□□□□□ -0.18
MSH5-216ENST00000484309 GJA10Q969M2 543 aa13.95□□□□□ -0.18
MSH5-216ENST00000484309 TIFAQ96CG3 184 aa13.95□□□□□ -0.18
MSH5-216ENST00000484309 SEMA6BQ9H3T3 888 aa13.95□□□□□ -0.18
MSH5-216ENST00000484309 AZI2Q9H6S1 392 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms